Bubalus bubalis (water buffalo): 102399288
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Entry
102399288 CDS
T05912
Name
(RefSeq) cadherin-10
KO
K06802
cadherin 10, type 2, T2-cadherin
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bbub04515
]
102399288
Cell adhesion molecules [BR:
bbub04515
]
Cadherins
Major cadherins
102399288
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Stevor
ASFV_J13L
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
102399288
NCBI-ProteinID:
XP_045019583
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All DBs
Position
19:48669894..48864162
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AA seq
788 aa
AA seq
DB search
MTIYQFLLLFLLWVCLPHFCSPEIMFRRTPVPQKRILGARVPRSDGKILHRQKRGWMWNQ
FFLLEEYTGSDYQYVGKLHSDQDKGDGSLKYILSGDGAGTLFIIDEKTGDIHATRRIDRE
EKAFYTLRAQAINRRTLRPVEPESEFVIKIHDINDNEPTFPEEIYTASVPEMSVVGTSVV
QVTATDADDPSYGNSARVIYSILQGQPYFSVEPETGIIRTALPNMNRENREQYQVVIQAK
DMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESSPVGTAIGSVKATDADTGK
NAEVEYRIIDGDGTDMFDIITEKDTQEGIITVKKPLDYESRRLYTLKVEAENTHVDPRFY
YLGPFKDTTIVKISIEDVDEPPVFSRSSYLFEVHEDIEVGTIIGTVMARDPDSTSSPVRF
SLDRHTDLDRIFNIHSGNGSLYTSKPLDRELSQWHNLTVIAAEINNPKEMTRVAVFVRIL
DVNDNAPQFAVFYDTFVCENARPGQLIQTISAVDKDDPLGGQKFFFSLAAVNPNFTVQDN
EDNTARILTRKNGFNRHEISTYLLPVVISDNDYPIQSSTGTLTIRVCACDSQGNMQSCSA
EALLLPAGLSTGALIAILLCIIILLVIVVLFAALKRQRKKEPLILSKEDIRDNIVSYNDE
GGGEEDTQAFDIGTLRNPAAIEEKKLRRDIIPETLFIPRRTPTAPDNADVRDFINERLKE
HDLDPTAPPYDSLATYAYEGNDSIAESLSSLESGTTDGDQNYDYLREWGPRFNKLAEMYG
GGESDKDA
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgacaatatatcaatttttgctactatttctactctgggtatgcctgccacatttctgt
tctccagagataatgttcagaaggactcctgtgcctcagaaaagaattttaggtgcacgt
gtaccgaggagtgatggcaaaatacttcatcgtcaaaagcgtggttggatgtggaatcaa
tttttcttactggaggaatatacaggatctgattatcaatatgtgggcaagcttcattca
gaccaagataaaggagatggatccctcaaatatattttatctggagatggagctggtact
ctttttattattgatgaaaaaacaggtgacattcatgccacaagaagaattgatagggaa
gaaaaggccttttatactctacgtgcacaagctattaacagaagaactttaaggccagta
gaaccagagtctgagtttgtgatcaaaatccatgatatcaatgacaatgagccaacgttc
ccagaggaaatttatacagcgagtgttcctgaaatgtcggttgtaggtacttctgtggtg
caagtcacagctacagatgccgacgacccttcctatggaaacagcgccagagtcatttac
agcatacttcaagggcagccatatttctctgtggagcctgaaacaggtatcataaggact
gctttaccaaacatgaacagagaaaatagggagcaatatcaggtggtaatccaggccaaa
gacatgggcggccagatgggaggcttatcagggaccaccacggtcaacatcacgctgaca
gacgtcaatgacaatcccccacgcttcccccaaaacaccatccatcttcgagttcttgaa
tcctccccagttggcacagccattggaagcgtaaaagcgactgatgctgacactgggaaa
aatgctgaagtagaataccgaattattgatggtgatgggactgatatgtttgacattata
actgagaaggacacacaggagggcatcatcactgtgaaaaagccacttgactatgagagc
cgaaggctttatactctgaaggttgaagcagaaaatacccatgtggatccacgtttttat
tacctaggaccttttaaagatacaacaattgtgaaaatctcgattgaagatgtggatgaa
ccccctgttttcagcagatcctcctatctgtttgaggttcatgaagatattgaagtgggt
acaatcattggtactgtaatggcaagagacccagattctacttctagccctgttagattt
tccttggatcgccacactgaccttgacaggatctttaacatacattctggaaatggatcc
ctttatacatcaaagccacttgaccgtgaactatctcagtggcacaatcttactgttata
gctgctgaaatcaacaatcccaaagagatgactcgagtggctgtttttgtgagaattttg
gatgttaatgacaatgccccacaatttgctgtgttctatgacacttttgtctgtgaaaat
gccagaccaggacagctaatacagactataagtgcagtagacaaagatgatcctttaggc
ggacagaaatttttcttcagtttagctgctgtcaatccaaacttcacagtacaagacaac
gaagataatactgccagaattttaaccagaaaaaatggcttcaatagacatgaaataagc
acttatctcttgcccgtggtgatttcggacaacgattacccgattcagagcagcacggga
acactcaccatccgagtgtgtgcctgcgacagccaaggcaacatgcagtcctgcagcgcc
gaggccctgctcctgcctgccgggctcagcacaggggctctgatcgccattctcctctgc
atcatcattctgctggttatagtagtactgttcgcagctctgaagagacagcggaaaaaa
gagcctctgatcttatctaaagaagacatcagagacaacatcgtgagctataatgatgaa
ggtggcggagaggaggacactcaggcctttgatatcggcaccttgaggaatccggccgct
attgaggaaaaaaagctgcggcgagatattattccagaaaccttatttatcccccggagg
actccgacggccccggataacgcggacgtccgggatttcatcaatgaaaggctcaaggaa
cacgacctggatcccacggcgcctccctacgactcgctcgctacctacgcctacgaaggg
aacgactccatcgccgagtctctgagttccttggaatcaggtaccactgatggagaccaa
aactacgattacctccgagaatggggccctcggtttaacaagctggcggagatgtacggc
ggcggggaaagcgacaaagacgcttaa
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