Bubalus bubalis (water buffalo): 102399306
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Entry
102399306 CDS
T05912
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X5
KO
K06237
collagen type IV alpha
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04151
PI3K-Akt signaling pathway
bbub04510
Focal adhesion
bbub04512
ECM-receptor interaction
bbub04820
Cytoskeleton in muscle cells
bbub04926
Relaxin signaling pathway
bbub04933
AGE-RAGE signaling pathway in diabetic complications
bbub04974
Protein digestion and absorption
bbub05146
Amoebiasis
bbub05165
Human papillomavirus infection
bbub05200
Pathways in cancer
bbub05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102399306 (COL4A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102399306 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102399306 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102399306 (COL4A5)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
102399306 (COL4A5)
09154 Digestive system
04974 Protein digestion and absorption
102399306 (COL4A5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102399306 (COL4A5)
09162 Cancer: specific types
05222 Small cell lung cancer
102399306 (COL4A5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
102399306 (COL4A5)
09174 Infectious disease: parasitic
05146 Amoebiasis
102399306 (COL4A5)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
102399306 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bbub04147
]
102399306 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
bbub00536
]
102399306 (COL4A5)
Exosome [BR:
bbub04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
102399306 (COL4A5)
Glycosaminoglycan binding proteins [BR:
bbub00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102399306 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
102399306
NCBI-ProteinID:
XP_006072408
LinkDB
All DBs
Position
X:complement(85761110..86013880)
Genome browser
AA seq
1685 aa
AA seq
DB search
MKLRGVSLAAGLSLLALSLWGQPAEAAACYGCSPGSKCDCSGIKGEKGERGFPGLEGHPG
LPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQG
IPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPG
IQGPAGPPGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGP
PGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGVKGEKGEQGEPGKRGKP
GKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDTGLPGPPGLVIPRPGTGVTVGEKGN
IGLPGLPGDKGDRGFPGIQGPPGLPGPPGPAVIGPPGPPGFPGERGQKGDEGPPGISIPG
SPGLDGQPGAPGPPGPPGPPGPHIPPSDKICEAGPPGPPGSPGDRGLQGEQGMKGDKGDT
CFNCIGTGVSGPPGQPGLPGLPGPPGSLGFPGQKGEKGHAGATGPKGLTGIPGAPGAPGF
PGPKGEPGDILTFPGMKGDKGDLGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGMAFKG
ERGPPGNPGLPGLPGNRGPMGPVGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTIT
QPGKPGLPGHPGRDGEVGLPGEPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGI
PGPPGAPGSPGRIGLEGPSGPPGFPGPKGEPGFGLPGPPGPPGLPGFKGILGPKGDRGFP
GPQGPPGQAGLDGLPGPKGDIGPNGQPGPIGPPGLPGTGFQGPPGPPGIPGPIGQPGLHG
LPGEKGDPGPPGFDVPGPPGERGSPGIPGAPGPMGPPGSPGLPGKAGASGFPGAKGEMGM
MGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPAGEKGSKGEPGLPGLPGPMDPDLL
GSKGEKGDPGLPGIPGVAGPKGYQGLPGDPGQPGLSGQPGLPGPAGPKGNPGLPGMPGLT
GPPGLKGNMGDMGFPGPQGPKGSFGPPGVPGQPGSPGLPGQKGEKGDPGISGIGLPGLPG
PKGEPGLPGYPGNPGTKGSMGETGLPGLPGTPGAKGQPGLPGFPGTPGLPGPKGISGPPG
NPGLPGEPGPVGGGGRPGPPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGIPGPPGLPGL
SGQKGDEGLPGIPGNPGLPGPKGEPGFHGFPGLQGPPGPPGSPGPALEGPKGSPGPQGPP
GRPGPPGPEGPRGLPGSGGIKGERGNPGQPGQPGLPGLKGDQGPPGLQGNPGRPGLNGMK
GDPGLPGVPGFPGMKGPSGVPGSTGPEGDPGLIGPPGPPGLPGPSGQSIVIKGDAGPPGI
PGQPGLKGLQGLPGPQGLPGPIGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGP
PGPDGLQGPPGPPGTSSIAHGFLITRHSQTTDAPQCPQGTIQVYEGFSLLYVQGNKRAHG
QDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMEPLKGQSIQPF
ISRCAVCEAPAVVIAVHSQTIQIPRCPQGWDSLWIGYSFMMHTSAGAEGSGQALASPGSC
LEEFRSAPFIECHGRGTCNYYANSYSFWLATVDVADMFSKPQSETLKAGDLRTRISRCQV
CMKRT
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcgtggagtcagcctggctgccggcttgtccttactggccctgagtctttgg
gggcagcccgcagaggctgcggcttgctatgggtgttctccaggatctaagtgtgactgt
agtggtataaaaggagaaaagggggaaagaggatttccaggtttggaaggccacccaggt
ttgcctggatttccaggtccagaagggcccccagggcctcggggacaaaagggtgatgat
ggaattccagggccaccaggaccaaaagggatcagaggtcctcctggacttcctggattt
ccagggacaccaggtcttcctggaatgccaggccatgatggggccccaggacctcaaggt
atccctggatgcaatggaaccaagggagaacgtggatttccaggcagtcccggttttcct
ggtttacagggtcctccaggacctcctgggatcccaggtatgaagggagaaccaggtagt
ataattatgtcatccctgccaggaccaaagggtaatccaggctatccaggtcctcctgga
attcaaggcccagctggtccccctggtataccagggccaattggtcccccaggaccacca
ggtttgatgggccctcctggcccaccaggacttccaggaccaaagggcaatatgggctta
aatttccagggacccaagggtgagaagggtgagcaaggtcttcagggcccccctgggcca
cctgggcagatcagtgaacaaaaaagaccaatcgatgtagagtttcagaaaggagatcag
ggacttcctggtgaccgagggcctcctggacccccagggatacgtggtcctccaggtcct
ccaggtggtgtgaaaggtgagaagggtgagcaaggagagcctggcaaaagaggtaaacca
ggcaaagatggagagaatggccaaccaggaattccaggtttgcctggtgatcctggttac
cctggtgaaccaggaagagatggagaaaagggtcaaaaaggtgacactggcctacctggg
cctcctggacttgtaatacctaggcctgggactggtgtaactgtaggagaaaaaggaaac
attgggttacctggcttgcctggagataaaggagatcgaggatttcctggaatacaaggt
ccacccggccttcctggacctccaggacctgcagttataggtcctcctggaccccctggc
tttcctggggaaagaggccagaaaggtgatgaaggcccacctggaatttccattcctgga
tctcctggacttgatggacagcctggggctcctggtcctcctggcccccctggccctccc
ggccctcacatccctcctagtgataagatatgtgaagcaggccctcctggccctccagga
tctccaggtgatagaggactccaaggagaacaaggaatgaaaggtgacaaaggtgacacc
tgcttcaactgtattggaactggtgtttcagggcctccaggtcagcctggtttgccaggt
cttccaggtcccccaggatctcttggtttccctggacagaagggcgaaaaaggacatgct
ggtgcaactggtcccaaaggattaacaggcataccaggagctccaggtgctccaggcttt
cctggacctaaaggtgaacctggtgacatcctcacatttccaggaatgaagggtgacaaa
ggagatttgggttcccctggagctccagggcttcctggtttacctggcacccctggacag
gatggattgccaggacttcctggccccaaaggagaacctggtggaatggcttttaagggt
gaaagaggtccccctgggaacccaggtttgccaggtctcccaggaaatagggggcctatg
ggccctgttggttttggccctccaggtccagtaggtgaaaaaggcatacaaggtgtggca
ggaaatccaggccaaccaggaataccaggtcctaaaggtgatccaggtcagaccataacc
caaccagggaagcctggcctgcctggtcacccaggcagagatggtgaagtaggtcttcca
ggtgaacctggactcccgggccagccaggcttgccaggaatacctggtagcaaaggagaa
ccgggtatccctggaatcgggcttcctggaccacctggtcccaaaggttttcctggaatt
ccaggacctccaggagcacctggatcacctggaagaatcggtctagaaggtccttctggg
ccaccaggctttccaggaccaaagggagaaccaggatttgggctacctgggccacctggg
cctccaggactcccaggtttcaaaggaatacttggtccaaaaggggatcgtggtttccca
ggacctcagggtcctccaggacaagctggcttggatgggctacctggaccaaaaggtgac
attggaccaaatggacaacctgggccaattggacctcctgggctgccaggaacaggtttt
cagggaccaccagggccaccaggaattcctggaccaataggccaacctggcttgcatgga
ctaccaggagagaagggggatccagggcctcctggatttgatgttccaggacctcctggt
gagagaggcagcccagggatccctggagcaccaggtcctatgggacccccaggatcacca
gggctcccaggaaaagcaggtgcctctggctttccaggtgccaaaggtgaaatgggtatg
atgggacctccaggcccaccaggacctttgggaattcctggcaggagtggtgttcctggt
ctcaaaggtgatgatggtttgcagggtcagccaggacttcctggccctgcaggagagaaa
ggtagtaaaggagagcctggccttccaggccttcctgggcctatggatccagatctgctg
ggctcaaaaggagagaaaggggaccctggcctaccaggtattcctggagttgcagggcca
aaaggttaccagggtttacctggagacccagggcaacctggactgagtggacaacctgga
ttgccaggaccagcaggtcccaagggtaaccctggtctccctggaatgccaggacttaca
ggacctcctggactgaaaggaaacatgggtgatatgggttttccaggcccacagggtcca
aaagggtctttcggacctcctggagttcctggacaacctggctccccaggattacctgga
cagaaaggagaaaaaggtgatcctggtatttcaggcattggtcttccaggtcttcctggc
ccaaagggtgaacctggtctgcctggatacccagggaaccctggtaccaaaggttctatg
ggagaaactggtttgcctggattaccggggacccctggagcaaaaggacaaccaggcctt
cctggattccctggaaccccaggccttcctggaccaaaaggtattagtggtcctcctggg
aaccctggccttccaggagaacctggtcctgtaggtggtggaggtcgtcctgggccacca
gggcctccaggtgaaaaaggcaaaccaggtcaagatggtattcctggaccagctggacag
aagggtgaaccaggtcaaccaggctttggaatcccaggaccccctggacttccaggactt
tctggtcaaaagggtgatgaaggattacctggcattccaggaaaccctggccttccaggt
ccaaagggtgaaccaggctttcatggtttccctggtctgcagggtcccccaggccctcct
ggttctccaggtccagctctggaaggccctaaaggcagccctggaccccaaggtcctcct
gggagaccaggtccaccaggtccagaaggtccccggggtctacctggaagtgggggtatt
aaaggagaaagaggtaacccaggccaacctgggcaacctggtttgcctggtttgaaaggt
gatcaaggtcctccaggactccagggtaaccctggccggccaggtctcaatggaatgaaa
ggagatcctggtctccctggtgttccaggatttccaggcatgaaaggacccagtggagta
cctggttcaactggccctgagggggatccaggacttattggcccaccaggtccccctgga
ttacctggtccttcaggtcagagtattgtaatcaaaggagatgctggcccaccagggatt
ccaggccagcctggattaaaaggtttacaaggactcccaggacctcagggtttaccaggt
ccaattggccctccaggagatcctggacgcaatggactccctggctttgatggtgcagga
ggacgcaaaggagacccaggtttgccaggccagccaggtactcgtggcttggatggtccc
cccgggccagatggattgcagggtcctccaggtccccctggaacctcttctatcgcccat
gggtttctcatcacacgtcacagccagacaacagatgctccacaatgcccacagggaacc
atccaggtgtatgaaggcttttctctcctgtatgtacaaggaaataaaagagctcatggt
caagacttgggaacagccggcagctgccttcgtcgtttcagtaccatgcctttcatgttc
tgcaacatcaataatgtttgcaactttgcttcaagaaatgattattcttactggctctcc
accccagagcccatgccaatgagcatggaacccctgaaggggcagagcatccagccattc
attagtcgatgtgcagtatgtgaagctccggccgtggtgattgcagtccacagtcagacc
atccagattccccgttgtcctcagggatgggattctctctggattggttattccttcatg
atgcacacaagtgcaggggcagagggctcaggccaagccctggcctcccctggttcctgc
ttagaagagtttcgttcagctcccttcattgagtgtcatgggcgggggacctgcaactat
tacgccaactcctacagcttttggctggcgactgtagatgtggcagacatgttcagcaaa
cctcaatcagaaacgctgaaagcaggagacttgaggacacgtattagccgatgtcaagtg
tgcatgaagaggacataa
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integrated database retrieval system
