Bubalus bubalis (water buffalo): 102399589
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Entry
102399589 CDS
T05912
Symbol
HNRNPU
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U isoform X2
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102399589 (HNRNPU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbub03041
]
102399589 (HNRNPU)
Spliceosome [BR:
bbub03041
]
Common components
Common spliceosomal components
hnRNP proteins
102399589 (HNRNPU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
SRP54
AAA_18
Motif
Other DBs
NCBI-GeneID:
102399589
NCBI-ProteinID:
XP_006063591
LinkDB
All DBs
Position
5:complement(48738017..48747769)
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AA seq
806 aa
AA seq
DB search
MSSSPVNVKKLKVSELKEELKKRRLSDKGLKAELMERLQAALDDEEAGGRPAMEPGNGSL
DLGGDSAGRSGAGLEQEAAAGGDDDEEEEEEEEEGIAALDGDQMELGEENGAAGAADSGP
MEEEEAASEDENGDDQGFQEGEDELGEEEEGAGDENGHGEQQPQPPAAPQQQPQQQRGAA
KEAAGKSSGPTSLFAVTVAPPGARQGQQQAGGDGKTEQKGGDKKRGVKRPREDHGRGYFE
YIEENKYSRAKSPQPPVEEEDEHFDDTVVCLDTYNCDLHFKISRDRLSASSLTMESFAFL
WAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSLTTSGMLLGEEEFSY
GYSLKGIKTCNCETEDYGEKFDENDVITCFANFESDEVELSYAKNGQDLGVAFKISKEVL
AGRPLFPHVLCHNCAVEFNFGQKEKPYFPIPEDYTFIQNVPLEDRVRGPKGPEEKKDCEV
VMMIGLPGAGKTTWVTKHAAENPGKYNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRA
PQCLGKFIEIAARKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQK
KAEVEGKDLPEHAVLKMKGNFTLPEVAECFDEITYVELQKEEAQKLLEQYKEESKKALPP
EKKQNTGSKKSNKNKSGKNQFNRGGGHRGRGGFNMRGGNFRGGAPGNRGGYNRRGSMPQR
GGGGGGSGGIGYPYPRGPVFPSRGGYSNRGNYNRGGMPNRGNYNQNFRGRGNNRGYKNQS
QGYNQWQQGQFWGQKPWSQHYHQGYY
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctcgcctgttaatgtgaaaaagctgaaggtgtcggagctgaaggaggagctc
aagaagcggcgcctgtccgacaagggcctcaaggccgagctcatggagcgtctccaggcc
gcgctggacgacgaggaggccgggggccgccccgccatggagcccgggaacggcagccta
gacctgggcggggattccgccgggcgctcgggagcaggcctcgagcaggaggccgcggct
ggcggcgacgacgacgaggaggaagaggaggaggaggaggaagggatcgccgccttggat
ggcgaccagatggagctcggggaggagaacggcgccgcgggggcggccgactcgggcccg
atggaggaggaagaggccgcctcggaggacgagaacggcgacgaccagggcttccaggaa
ggggaggatgagctcggcgaagaggaagaaggcgcgggcgatgagaacgggcacggggag
cagcagcctcaaccgccggcggcgccgcagcaacaaccccagcagcagcgcggggccgcc
aaggaggccgcggggaagagcagcggccccacgtcgctgttcgcggtgacggtggcgccg
cccggggcgagacagggccagcagcaggcgggaggagacggcaaaacagaacagaaaggc
ggagataaaaagagaggtgttaaaagacctcgagaagatcatggccgtggctattttgag
tacattgaagagaacaagtatagcagagccaaatctcctcagccacctgttgaagaagaa
gatgaacacttcgacgacacagtggtttgtcttgatacttataattgtgatctacatttt
aaaatatcaagagatcgcctcagtgcttcttcccttaccatggagagttttgcttttctt
tgggctggaggaagggcatcttatggtgtgtcaaaaggcaaagtctgttttgagatgaag
gttacagagaagatcccagtgaggcatttatatacgaaagatattgatatacatgaagtt
cggattgggtggtcactaaccacaagtggaatgttgcttggtgaagaagaattttcttat
gggtattctctaaaaggaataaaaacatgcaactgtgagactgaagattatggagagaag
tttgatgaaaatgatgtgattacgtgttttgctaattttgaaagtgatgaagtagaactc
tcttacgcaaagaatggacaagatcttggcgttgccttcaaaatcagtaaggaagttctt
gctggacgaccactcttcccacatgttctgtgccacaactgtgcagttgaatttaatttt
ggtcagaaggaaaagccatattttccaatacctgaagactatacttttatccagaatgtc
cccttggaggatagagttagaggaccaaaggggcctgaagagaagaaagattgtgaagtg
gttatgatgattggcttgccaggagctggaaaaactacctgggttactaaacatgcagca
gaaaatcctggtaaatacaacattcttggaacaaacaccataatggataaaatgatggtg
gcaggttttaagaagcaaatggcagatactggaaaactgaacacactgttgcagagagct
ccacagtgtcttggaaagtttattgagattgctgcccgtaagaagcgaaatttcattttg
gatcagacaaatgtgtctgctgccgcccagagaagaaaaatgtgcctctttgcaggcttc
caacgaaaagctgttgtagtttgcccaaaagatgaagactataagcaaagaacacagaag
aaagcagaagtagagggaaaagacctaccagaacatgcagttctcaaaatgaaaggaaac
tttactctgccagaagtagctgagtgctttgatgaaataacctatgttgaacttcagaag
gaagaagcccagaaacttttggagcaatataaggaagaaagcaaaaaggctcttccaccg
gaaaagaaacagaacacaggctcaaagaagagcaataaaaataagagtggcaagaaccag
tttaacagaggcggtggccatagaggacgtggtggattcaatatgcgtggtggaaatttc
agaggaggagctcctgggaatcgaggtggatataacaggaggggcagtatgccgcagaga
ggaggcggtggcggcggcagtggtggcattggctatccgtaccctcgcggccctgtcttt
cccagccgcggtggctactcaaacagagggaactacaacagagggggaatgcctaacaga
gggaactacaaccagaacttcagaggacgaggaaacaatcgtggctacaaaaatcaatct
cagggctacaaccagtggcagcagggtcaattctggggtcagaagccatggagtcagcat
tatcaccaaggatattattga
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