Bubalus bubalis (water buffalo): 102399615
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Entry
102399615 CDS
T05912
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X10
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102399615 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bbub04990
]
102399615 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
bbub04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
102399615 (PDLIM5)
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
PDZ_2
DUF4749
Motif
Other DBs
NCBI-GeneID:
102399615
NCBI-ProteinID:
XP_006046955
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Position
7:complement(105041057..105268762)
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AA seq
602 aa
AA seq
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MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKASQANVRIGDVVLSIDGISAHG
MTHLEAQNKIKGCTGSLNMTLQRASATPKLEPVPVQKKTKVTNNPDTVKIPPKRPPRKHI
MDRNTEFYHIPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEHLKESEADNT
KKAKFDSSLEDLPQSGPHPPTTAQVLHIGGQVATVSKVTTYFSSSTRNVATSSLEASRNL
STLSSPARYSAAVLSSAAATVSAVLAAKTRLSSPEKYHSLLDALCISPVSKPLAFSYLQP
LRKSTGSVHVKKTSNAQESSLQSAPSAGTAWSSPERPGSPGSARPGAAGLTAAATFKPLG
SRGIKSPSWQRPSQAAPSTGRVVSSGPSTGAVAPANSARGQPQPSDEDTLVQRAEHIPAG
KRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEQGALYCELCYEKF
FAPECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALF
GTICRGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSV
NF
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacagtgtgtccttggttggcccagctccctggggtttccggctgcaaggt
ggcaaggatttcaacatgcctttgacaatctcaagtctaaaagatggtggaaaagcatcc
caggcaaacgtaagaataggcgacgtggttctcagcattgatggaataagtgcccatggc
atgactcatctggaagcccagaacaagattaagggttgtacaggctctttgaatatgact
cttcaaagagcatctgctacacccaagcttgagccagttcctgttcaaaagaaaacaaaa
gtgacaaataaccctgacaccgtgaaaatcccacccaaacgcccaccaagaaaacacatt
atggatcgtaataccgagttttatcacatacctactcacagcgatgccagcaagaagaga
ttgattgaggatactgaagactggcgtccgaggactggaacgactcagtctcgttctttt
cgaatccttgcccagatcactgggactgaacatctgaaagagtctgaagctgataataca
aagaaggcaaagtttgacagttctctggaagacctacctcagagtggacctcacccacct
acaactgctcaggttttacatattggtggccaagtagccacagtttctaaagtaactacg
tattttagcagctccacaagaaatgtggcaacaagttctttggaagcttctcgaaacttg
tctaccctgtcttctcctgctagatacagtgctgccgttctgagcagcgcagccgctact
gtgtctgctgttcttgctgcaaaaaccaggctctccagtcctgaaaaatatcactcactc
ctggatgcactttgcatcagccctgtatccaagcctttagctttttcttatctccagccc
ttgaggaaatcaactggctctgtccatgttaagaaaaccagcaatgcccaggagtcttct
ctgcagtctgccccctcggcaggtacagcttggagctcccccgagaggccaggaagccca
ggctcggccagaccaggggcggccgggctcaccgctgctgccaccttcaagcctctgggg
tcccgtgggatcaagtcaccaagctggcaacggcccagccaagcagcaccttccactgga
agagtcgtaagcagtgggccatccacaggagccgtggcaccagccaactcagccagaggg
cagcctcagcccagtgacgaggacactttggtgcaaagggccgagcatattcccgcaggg
aaacgaactccgatgtgcgcccactgcaaccaggttatcaggggaccattcctagtggca
ttggggaaatcttggcacccagaagaatttaactgtgctcactgcaaaaataccatggcc
tacattggatttgtagaggaacagggagccctgtattgtgagctctgctatgagaaattc
tttgctccagaatgtggtcgatgccaaaggaagatccttggagaagtcatcaatgctttg
aaacaaacttggcatgtttcctgttttgtgtgtgtggcctgtggaaagcctattcgtaat
aatgtttttcacttggaggatggtgagccctactgtgagactgattattatgccctcttt
ggtactatatgccgtggatgtgaatttcccatagaagctggcgacatgttcctggaagct
ctgggctatacctggcacgacacttgttttgtatgctcagtgtgttgtgaaagtttggaa
ggtcagacctttttctctaagaaggacaagccactttgcaagaaacatgctcattctgtg
aatttttaa
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