Bubalus bubalis (water buffalo): 102399783
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Entry
102399783 CDS
T05912
Symbol
TIA1
Name
(RefSeq) nucleolysin TIA-1 isoform X7
KO
K13201
nucleolysin TIA-1/TIAR
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102399783 (TIA1)
03041 Spliceosome [BR:
bbub03041
]
102399783 (TIA1)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
102399783 (TIA1)
Spliceosome [BR:
bbub03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
102399783 (TIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_10
RRM_3
Calcipressin
Nup35_RRM_2
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
102399783
NCBI-ProteinID:
XP_025117079
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All DBs
Position
12:complement(68071266..68127911)
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AA seq
374 aa
AA seq
DB search
MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAA
AALAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGR
ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS
TYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY
SFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQNQIGYPQAYGQWGQW
YGNAQQIGQYMPNGWQVPAYGMYGQPWNQQGFNQTQSSPPWMGPNYGVQPPPGQNGSMMP
NQPAGYRVAGYETQ
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaaatgcctaagactctatacgttggtaacctttccagagatgtcacagaa
gctctaattctccagctctttagccagattggaccttgtaaaaactgcaaaatgattatg
gatacagccggaaatgatccatattgttttgtggagttttatgagcatcgtcatgcagct
gcagcacttgctgctatgaatgggcggaagataatgggtaaggaagtcaaagtgaattgg
gcaacaactcccagcagtcaaaagaaagacacaagcaatcatttccatgtctttgttggt
gatctcagtccagaaattacaactgaagatataaaagctgcttttgcaccatttggaaga
atatcagatgcccgagtggtaaaagacatggcgacaggaaagtctaagggatatggcttt
gtctcctttttcaacaaatgggatgctgaaaacgccattcaacagatgggtggccagtgg
cttggtggaagacaaatcagaactaactgggcaacccgaaagcctccagctccaaagagt
acatatgagtcaaacaccaaacagctatcatatgatgaggtcgtaaatcagtccagtcca
agcaactgtactgtgtactgtggaggcgtcacttccgggctgacagaacaactaatgcgt
cagactttttcaccatttggacaaataatggaaattcgagtctttccagataaaggatat
tcttttgttcggttcaattcccatgaaagtgcagcacatgcaattgtttctgttaatgga
actaccattgaaggccatgttgtgaaatgctactggggcaaagaaactctcgatatgata
aatcctgtgcaacagaatcaaattggatatccacaagcttatggccagtggggccagtgg
tatgggaatgcacaacaaattggccagtatatgcctaatggttggcaagtacctgcatat
ggaatgtatggccagccgtggaaccagcaaggatttaatcagacacagtcttctccacca
tggatgggaccaaattatggagtgcagccacctccaggacagaatggcagcatgatgcct
aatcagcctgcagggtatcgagtggcagggtatgaaacccagtga
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