Bubalus bubalis (water buffalo): 102399872
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Entry
102399872 CDS
T05912
Symbol
COLEC12
Name
(RefSeq) collectin-12 isoform X1
KO
K10062
collectin sub-family member 12
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102399872 (COLEC12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbub04131
]
102399872 (COLEC12)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
bbub04091
]
102399872 (COLEC12)
Membrane trafficking [BR:
bbub04131
]
Endocytosis
Phagocytosis
Opsonins
102399872 (COLEC12)
Lectins [BR:
bbub04091
]
C-Type lectins
Asialoglycoprotein and DC receptors
102399872 (COLEC12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COLEC12
Collagen
Lectin_C
Filament
ATG17_like
KxDL
Fez1
SepF
Tropomyosin
DUF7310
Alpha-2-MRAP_C
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
102399872
NCBI-ProteinID:
XP_006079266
LinkDB
All DBs
Position
22:26654899..26837918
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AA seq
742 aa
AA seq
DB search
MKDDFAEEEEVHSFGYKRFGIQEGTQCTKCKNNWALKLSIILLYILCALLTITVAILGYK
VVEKMDNVTGGMETSRQTYDDKLTAVESDLKKLGDQTGKKALSTNSELSTFRSDILDLRQ
QLREITEKTSKNKDTLEKLQASGDALVDRQSQLKETLENNSFLITTVNKTLQAYNGYVTN
LQQDTSVLQGNLQSQMYSHNVVIMNLNNLNLTQVQQRNLITNLQRSVDDTSQAIQRIKND
FQNLQQVFLQAKKDTDWLKEKVQSLQTLAANNSALAKANNDTLEDMNSQLSSFTGQMDNI
TTASQANEQNLKDLQDVHRDAENRTAAKFSQLEERFQLFESDIVNIISNISYTAHYLRTL
TSNLNEVRTTCTDTLTKHTDDLTSLNNTLANIRLDSVSLRMQQDLMRSRLDTEVANLSVI
MEEMKLVDSKHGQLIKNFTILQGPPGPRGPKGDRGQQGPPGPTGNKGQKGEKGEPGPPGP
AGERGPIGPVGPPGERGSKGSKGLQGSKGSRGSPGKPGPQGPSGDPGPPGPPGKDGLPGP
QGPPGFQGLQGTVGEPGVPGPRGLPGLPGMPGMPGIKGPPGPPGPSGAAVPLALKTEPTT
APEDNGCLPYWKNFTDKCYYFSTERDFFEDAKLFCERMSSHLVFINTGEEQQWIKNQMVA
KQNYWIGLTDLEQENEWRWLDGTLLEYKNWKAGQPDNWGHGHGPGEDCAGLINFGQWNDF
QCEDMNHFICEKDRERELAITL
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgattttgcagaggaggaggaggtacattccttcggttacaagcggtttggt
attcaagaaggaacacaatgtaccaaatgtaaaaataactgggcactgaagctttctatc
atactgttatacattttgtgtgccttgcttaccatcacagtagccattttgggatacaaa
gttgtagagaaaatggacaatgttacaggtggcatggagacatctcgccaaacctatgat
gacaagctcacagcagtggaaagtgacctgaaaaaattaggggaccaaacgggaaagaaa
gcgctcagcaccaactcagaactctccaccttcaggtcggacatcctggatctccgtcag
caacttcgtgagatcacggaaaagaccagcaagaacaaagatacgctggagaagttacag
gcaagcggggacgcgctggtggaccggcagagccaactgaaggaaactttggagaataac
tccttcctcatcaccactgtcaacaaaaccctgcaggcgtataacggctacgtcacgaat
cttcagcaggacacgagcgtgctgcagggcaacctgcagagccaaatgtactctcacaac
gtggtcatcatgaacctcaacaacctgaacctaacacaggtgcagcagaggaacctcatc
acgaatctgcagcgctccgtggatgacacgagccaggcgatccagcgcatcaagaacgac
ttccagaacctacagcaggtcttccttcaagccaagaaggacacggattggctgaaggag
aaggtgcagagcctgcagacactggctgccaataactccgccttggccaaagccaacaac
gacaccctggaggacatgaacagccagctcagctccttcacaggacagatggacaatatc
accacagcctcccaagccaatgagcagaacctgaaggacctgcaggacgtacacagggat
gcggagaacagaacggcagccaaattcagccagctcgaggagcgcttccagctctttgag
tcagacattgtgaacatcatcagcaatatcagctacacagcccactacctgcggacgctg
accagcaacctgaacgaagtcaggaccacgtgcacagacacactgaccaaacacacggac
gatctgacctccctgaacaacacgctggccaacatccgtttggattctgtttctctcagg
atgcagcaagatttgatgaggtcaaggttggacacggaagtggccaacttgtcagtgatt
atggaagaaatgaagctggtggactccaagcatggtcagctcatcaagaattttaccatc
ctgcaaggtcctcctggccccaggggtccaaaaggtgaccgaggacagcagggaccccca
ggccccaccggcaacaaggggcagaaaggagagaagggggagccgggcccacctggccca
gctggtgagaggggcccaatcgggccggtcggcccccctggagagcgcggcagcaaaggc
tccaaaggcctgcaaggctccaaaggctcccgagggtctcctgggaagcccggcccccag
ggccccagcggggacccaggcccccctggcccgccgggcaaggatggactcccaggccct
cagggccctcccggcttccagggactgcagggcaccgttggggagcctggggtgcctggg
ccacgggggctgccaggcctccctgggatgccgggcatgccaggtatcaagggtccccct
ggtcccccgggcccctcgggggcggcagtgcccctggcccttaagaccgagccgaccaca
gcacctgaggacaacggctgcctgccttactggaagaacttcacagacaaatgctactat
ttttcaactgagagagacttttttgaggatgcaaaacttttctgtgaaagaatgtcttca
catctcgttttcataaacacgggagaggagcagcaatggatcaaaaaccagatggtggca
aaacagaactactggattggcctcacggacttggagcaggagaatgaatggaggtggctg
gatgggacacttctggagtacaaaaattggaaagctggacagccagataactggggtcat
ggccacgggcctggagaagattgcgctggactgattaattttgggcagtggaacgatttc
caatgtgaagacatgaatcacttcatctgcgagaaagacagggagagagaattagcaatt
acattataa
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