Bubalus bubalis (water buffalo): 102399903
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Entry
102399903 CDS
T05912
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6 isoform X3
KO
K11292
transcription elongation factor SPT6
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbub03021
]
102399903 (SUPT6H)
03036 Chromosome and associated proteins [BR:
bbub03036
]
102399903 (SUPT6H)
Transcription machinery [BR:
bbub03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
102399903 (SUPT6H)
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
102399903 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
HHH_9
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
102399903
NCBI-ProteinID:
XP_025136783
LinkDB
All DBs
Position
3:complement(42983077..43014310)
Genome browser
AA seq
1679 aa
AA seq
DB search
MSDFVESEAEESEEEYNDEGEVVPRVNKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
DDDEEEGEEDEGSDSGDSEDEVSHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
VKKVSDDEDDEEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAVEAHMAPPEEEEEDDEESD
IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEY
EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
RSIPVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPTSSFSRKGPSTIQKIK
EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
AAKASRKKLKRVREEGDEEGDGEEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKLNISPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKICLAE
DEGLLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
LYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
LNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELIDNELAILYMNSKKSE
AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEA
ADHKQEEDMKRKQQRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHL
TVTWKVSDGIYQHVDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLL
NHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYV
TVTPEGFRYRGQVFPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLAD
LTRAVNALPQNMTSQMFNAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTP
AQQPVATPLMTPSYSYTTPSQPITTPQYHQLQASTTPQSAQAQPQPSSSSRQRQQQPKSN
SHAAIDWGKMAEQWLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggaaagcgaggctgaggagtccgaggaagagtacaatgatgaaggc
gaggtggtgccccgggtcaacaagaaatttgtagaagaggaggatgacgatgaggaggag
gaggaggagaacctggatgatcaggatgaacaaggaaacctgaaaggctttatcaatgat
gatgacgatgaagaggaaggggaggaggatgagggtagtgactccggagattcggaagat
gaagttagccacaagaagagaaaacgcacatcttttgacgaccgcctggaggatgatgat
tttgatctcattgaggagaatttgggtgtcaaagtcaaaagaggacaaaaataccggcgt
gtcaaaaaagtctcagatgatgaggacgacgaggaggaggaatatggcaaggaggaacat
gaaaaagaagctatcgcagaggagatctttcaggatggggaaggggaagaagggcaggag
gccgtggaggcccacatggctcctccagaagaggaggaggaagatgatgaggagtcagac
attgacgactttatcgtggacgatgatggacaacctctgaaaaaacctaagtggcggaaa
aagcttcctggatacactgatgcggctctgcaggaagcccaggagatttttggtgtggac
tttgactacgatgaatttgagaaatacaatgagtatgacgaagagctggaggaagagtat
gagtatgaggacgacgaggctgagggcgagatccgagtgcgccccaagaagaccaccaag
aaacgtgtgagccgcaggagcatcttcgagatgtatgagcccagtgagctggaaagcagc
cacctcaccgatcaggacaatgaaatccgagccactgacttgcctgagaggttccagctc
cgttccatccccgtcaagggggctgaagatgatgaactggaagaagaggcggactggatc
tacaggaatgcctttgctacaccaaccatttctctgcaggaaagctgtgattacctagac
cgagggcagccaaccagcagcttcagtcgaaaagggcccagcacaattcagaagattaaa
gaggccctgggcttcatgcgaaatcagcattttgaggtgcctttcattgctttctaccgg
aaggagtatgtggagcctgagttgcacatcaacgacctgtggagggtgtggcagtgggat
gaaaagtggacccagctgaggattcgtaaggagaacctaacacggctgtttgagaagatg
caggcttatcagtacgagcaaatctctgctgatcctgacaagccccttgctgatggcatc
cgggctctggacaccacggacatggagaggctcaaggatgttcaatcaatggatgaactg
aaagatgtctacaatcatttcctgctctattatggtcgtgacatccctaagatgcagaat
gctgccaaggccagccgcaagaagctaaagcgtgtaagggaagagggagatgaggaaggc
gatggtgaggaggcagaagatgaagagcagagagggccagagctcaagcaggcttctcgc
cgagacatgtacaccatctgccagagcgctgggctagacggcctggccaaaaagtttggg
cttactcctgagcaatttggggaaaacctccgggacagctaccagcggcatgagacagag
caatttccagcagagcccttggagctggcgaaggattatgtttgcagccagttccctacc
ccggaagccgtgctggaaggtgcccgctacatggtagccctgcagattgcccgagagccc
ctcgtccggcaggtgctgagacagactttccaggagagggccaagctcaatataagcccc
actaagaaaggtagaaaggatgtggatgaggcccactatgcttactccttcaagtactta
aagaacaagcctgttaaggaactgagagatgaccagttcctcaagatctgcctggctgaa
gatgaagggctgctcaccattgacatcagcatcgatatgaagggagtggaaggctatggc
agtgaccagacgtattttgaagaaatcaaacagttttactaccgagatgagttcagccat
caggtgcaggagtggaaccggcagcgcacaatggccatcgagcgagctctacagcagttc
ctgtatgtgcagatggccaaagagctcaagaacaagctgctggccgaagccaaagaatac
gtcataaaggcctgtagtcgaaagctctacaactggttgagggtggcgccctaccggcca
gatcaacaagtagaagaagacgacgactttatggatgagaaccaagggaagggcatccgg
gtcctaggcattgctttctcctctgccagagatcaccctgtgttctgcgccttggtcaat
ggtgaaggagaagtgacagacttcctccggctgcctcattttaccaaacggcgaactgca
tggagagaggaagagcgggagaagaaggctcaagacattgaaactctgaagaaattcctt
ctgaacaaaaagcctcatgtggtgacagttgcaggagagaacagggatgcccagatgttg
attgaggatgtgaagcgcatcgtgcatgagctggaccagggtcagcagctgtcctctatt
ggggtggagctgattgacaacgagttggccatcctctatatgaacagcaagaaatcagag
gcagagttccgggattaccctcctgtgctgagacaggctgtctccctggcccggcgcatc
caggaccctctgattgagtttgcccaggtgtgcagctcggatgaagacatcctatgcctc
aagttccacccattgcaggagcatgtggtgaaagaagagctgctcaatgccctgtactgt
gaattcatcaaccgagtcaatgaggttggagttgatgtcaaccgtgccattgcccacccc
tacagccaggccttgattcagtatgtctgtggcctaggacctcgaaaagggacccatctc
ctgaagattctgaaacagaacaacaccaggctcgagagccggactcagctggtcaccatg
tgccacatgggtcccaaagtcttcatgaattgcgctggcttcctcaagattgacactgcc
tccctgggggacagcactgactcatatattgaagtccttgatggttcccgagttcaccct
gagacttatgagtgggccaggaaaatggcggtggatgctctggaatatgatgagtcagct
gaggatgccaaccctgcgggagcccttgaagaaatcttagaaaacccagagcgactcaag
gacctggaccttgatgcctttgcagaagaactggagagacagggctatggtgacaaacac
atcacgctgtacgacatccgagcggagctgagctgtcggtataaggacctccggacagcc
taccgctctcccaacacagaggaaatcttcaatatgttaaccaaagagacaccggagacc
ttctacattggaaagctcattatctgcaacgtcactggcatcgcccataggcgtccacag
ggcgaaagctacgaccaggcaatccgcaacgatgagacggggctgtggcagtgccctttc
tgtcagcaagacaatttcccggaactaagcgaggtgggaatgactgttcactgccgcatc
atgaagattgacatcgagaagtttagtgcagacctgacctgccgcacctcagacctcatg
gacaggaacaatgagtggaaactgcccaaggacacctactatgactttgacgccgaagca
gcagaccacaagcaggaggaggacatgaagcggaagcagcagcggaccacgtatatcaag
cgagtgattgcacacccatccttccataatataaattttaagcaagcagaaaaaatgatg
gaaactatggaccagggtgacgtgatcatccgaccgagcagcaagggcgagaatcacctg
acagtgacctggaaggtcagtgacggcatctaccagcacgtggatgtgcgggaagaaggc
aaggaaaatgccttcagcctgggagccaccctgtggatcaacagtgaggagtttgaagac
ttggatgagattgttgcccgctatgttcagcctatggcatcttttgcccgggaccttcta
aaccacaagtattatcaggactgcagcggtggggaccgtaagaaattagaggagctgctc
atcaaaactaagaaggagaagcccaccttcattccctatttcatctgtgcctgcaaggaa
ctgcccggcaagttcctactgggataccagccccggggtaaacccaggatagaatacgta
actgtgactccagaaggattccggtaccggggccaagtcttccctactgtgaacggcctt
ttcagatggtttaaggaccactatcaggatcctgttccaggtatcacccccagtagcagc
agcaggacccgaacacctgcttctatcaatgctaccccagccaacatcaaccttgcagat
ctgacacgggctgtgaacgccctgccccagaacatgacctcgcagatgttcaatgccatt
gctgctgtgacgggccagggccagaaccctaatgccaccccagcgcagtgggcctccagc
cagtatggctacggtggcagcggagggggcagcagtgcttaccacgtattcccaacacca
gcccagcagccagtggccacaccactaatgacccccagctactcctacacaacgcccagc
caacccatcaccacgccacagtaccaccagctgcaggccagcaccaccccacagtctgcc
caggcccagccccagccctcctccagctcccggcaacggcagcagcagccaaagtccaac
agccatgcagccatcgactggggcaagatggcagaacagtggctgcaggagaaggaggcc
gagcggcggaaacagaagcagcggctgacccctcggccctcccccagccctatgatcgaa
agcacccccatgtctattgctggcgatgccaccccactcctggacgagatggatcggtag
DBGET
integrated database retrieval system
