Bubalus bubalis (water buffalo): 102400056
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Entry
102400056 CDS
T05912
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub02010
ABC transporters
bbub04148
Efferocytosis
bbub04975
Fat digestion and absorption
bbub04979
Cholesterol metabolism
bbub05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102400056 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102400056 (ABCA1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
102400056 (ABCA1)
04979 Cholesterol metabolism
102400056 (ABCA1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
102400056 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bbub02000
]
102400056 (ABCA1)
Transporters [BR:
bbub02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
102400056 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Mst1_SARAH
Motif
Other DBs
NCBI-GeneID:
102400056
NCBI-ProteinID:
XP_025137945
LinkDB
All DBs
Position
3:complement(156399869..156536922)
Genome browser
AA seq
2263 aa
AA seq
DB search
MAYWPQLRLLLWKNLTFRRRQTCQLFLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGEAPGIVGNFNKSIVSRLFSDARRLLLYSHRDT
SMKDIRKVLKTLYQIERFSSRLKLQDFLVDNETFSGFLHHNLSLPKPTVDKMLGADVSLR
KVFLQGYQLHLSNLCNGSKLGEVIRLGDQEVSRFCSLPREKLNAAEQVLRSNLDILKPVL
TKLNSTSLFPTEELGEATKALLDSLGNLAQELFSMRSWSDMRQEVMFLTNVNSSSSSTQI
YQAVSRIICGHPEGGGLKIKSLNWYEDNNYKALFGGNGTEDDAGTVYDNSTSPYCNDLMK
NLESSPLSRIIWKALKPLLVGKILYTPDTPVTRQLMTEVNKTFQELAVFHDLEGMWQELS
PKIWTFMESSSEMDLVRTLLDSRGNDDFWEQRLEGSDWTAKDIMAFLAKHPEDVQSTNGS
VYTWREAFNETNQAIQTISRFMECVNLNKLEPVATEVLLINKSMELLDERKFWAGVVFTG
IAPGSVELPHHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVV
EQAIIRVLTGTEKKTGVYMQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNSILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFV
FLSVFATVTILQCFLISTLFSRANLAAACGGIIYFMLYLPYVLCVAWQDYVGFTLKIFMS
LMSPVAFGFGCEYFALFEEQGIGVQWDNLFESPTKEDGFNLTTSVSMMLFDTFLYGVMTW
YIEAVFPGQYGIPRPWYFPCTKSYWFGEESDEKSHPGSSQKGASEICMEEEPTHLKLGVS
IQNLMKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVG
LPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLS
SCRNSSSTVSYLKKVVSELPPAGQSGGTGGEVQRLVALTQDVSAISNLIRKHVAEARLVE
DIGHELTYVLPYEAAREGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVD
AETSDGTLPARRNRRVFGDKQSCLRPFTEDDAMDPNDSDIDPESRETDLLSGMDGKGSYQ
VKGWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLE
LQPWMYNEQYTFVSNDAPEDVSTQELLNALTRMPGFGTRCMEGNPIPERPCLVGEEKWTT
APVPQTITDLFRNGNWTMENPSPTCQCSSDKIKKMLPVCPLGAGGLPPPQRKQNTADILQ
NLTGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGASNSQSLPPSEEVNDAIKRM
KKHLKVVKDSSADRFLSSLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINNAILRANL
QKGANPSQYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQ
ERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVL
ALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNN
INDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAV
EGVVFFLITVLIQYRFFIRPRPVKAKLPPLNDEDEDVKRERQRILDGGGQNDILEIKELT
KVYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSIL
SDIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYG
EKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIIKEGRSVV
LTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEF
FELAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFV
NFAKDQSDDDHLKDLSLHKNQTVVDVAVLTSFLQDEKVKESYV
NT seq
6792 nt
NT seq
+upstream
nt +downstream
nt
atggcttattggcctcagctgagattgctgctgtggaagaacctcactttcagaagaaga
cagacatgtcagctgtttcttgaagtggcctggcctctattcatcttcctgattctgatc
tccgtgaggctgagctatccaccctatgaacaacatgaatgccactttccaaacaaagcc
atgccctctgcaggaacacttccttgggttcaggggattatctgtaatgccaataacccc
tgtttccgttatccaactcctggtgaggctccgggaattgttggaaactttaacaagtcc
attgtgtctcgcctgttctcagacgctcggcggcttctcttgtacagccacagagacacc
agcatgaaggacatacgcaaagttttgaagacgttgtaccagatcgagcgtttcagctca
cgcttgaaacttcaggacttcctggtagacaatgaaaccttctctggattcctgcatcac
aacctctccctgccaaagccaactgtggacaagatgctaggggctgatgtcagtctccgc
aaggtgtttttgcaaggctaccagttacatttgagcaacctgtgcaatggatcaaaattg
ggagaggtgattcgacttggtgaccaagaagtttctaggttttgcagcctgccaagggag
aagctgaatgcagcagaacaggtgcttcgttccaacctggatatcctgaagccagtcctg
acaaaactaaactctacatctctcttcccaaccgaggagctgggtgaagccacaaaagct
ttgttggatagtcttgggaatctggcccaagagctgttcagcatgaggagctggagtgac
atgcggcaggaggtgatgtttctgaccaacgtgaacagctccagctcctccacccaaatc
taccaggccgtgtcccgcatcatctgcggccatcccgagggcgggggcctgaagatcaag
tccctgaactggtacgaggacaacaactacaaggccctcttcgggggcaacggcacggag
gacgatgctggcaccgtctatgacaactctacatctccttattgcaatgatttgatgaag
aatctggagtccagtcctctttctcgcatcatatggaaagctctcaagcccctgcttgtt
ggaaagatcctgtatacacctgatactccagtcacaaggcagcttatgactgaggtgaat
aagaccttccaggaactggctgtgtttcatgatctagaaggcatgtggcaagagctcagc
cccaagatctggacctttatggagagcagctcagaaatggaccttgtccggacactgttg
gacagcagaggcaatgatgacttttgggaacagcgactggaaggctcagactggacggcc
aaagatatcatggcatttctggccaagcacccagaggatgtgcagtccaccaacggctct
gtgtacacctggagagaagccttcaatgagaccaaccaggcaatccagaccatctctcgt
ttcatggagtgcgtcaacctgaacaagctcgaaccagtagcaacagaggttctgctcatc
aacaagtccatggagctcttggatgagcgcaagttctgggctggggtcgtgttcactgga
attgctcccggcagtgtcgagttaccgcatcatgtcaagtacaagatccggatggacatt
gacaatgtggagaggacgaataagatcaaagacgggtactgggaccctggtcctcgggct
gacccctttgaagatatgcggtatgtctggggaggcttcgcttacttgcaggatgtggtg
gagcaggcaatcatcagggtgctgacgggcacagagaagaaaactggcgtgtacatgcag
cagatgccttacccttgttatgttgatgacatcttcctgcgggtcatgagccggtccatg
cctctcttcatgacgctggcctggatctactcagtggctgtgatcatcaagggcattgtg
tacgagaaggaggcccggctgaaggagaccatgcgcatcatgggcctggacaacagtatc
ctctggttcagctggttcatcagcagcctcatccctctgctcgtgagcgccggcctactg
gtggtcatcctgaaattaggaaacctgcttccctacagcgaccccagcgtggtgtttgtc
tttctgtctgtgtttgccacggtgaccatcctgcagtgcttcctgatcagcacgctcttc
tccagagccaacctggcggccgcctgtgggggcatcatttacttcatgctatacctgccc
tacgtcctgtgcgtggcatggcaagactacgtgggttttaccctcaagatcttcatgagc
ctgatgtctcctgtggcttttgggttcggctgtgagtacttcgcccttttcgaggagcag
ggcattggggtacagtgggacaacctctttgagagccccacaaaggaagatggcttcaac
ctcaccacctccgtctccatgatgctgtttgacacctttctctatggggtgatgacgtgg
tacatcgaggctgtgtttccaggccagtatggaatccccaggccctggtatttcccttgc
actaagtcttactggtttggtgaggaaagtgatgagaagagccaccctggttccagccag
aagggagcatcggaaatctgcatggaggaggaacccacccatctgaaactgggtgtgtcc
attcagaacctgatgaaggtttaccgggatggcatgaaggtggcggttgatggcctggcc
ttgaatttctacgaggggcagatcacctccttcctgggccacaatggagctggcaagacc
accaccatgtccatcctgactgggttgttccctcccacctcgggcactgcctacatccta
gggaaagatatacgctccgagatgagcaccatccggcagaacctgggggtctgtccccag
cataacgtgctgtttgacatgctgactgtcgaggagcacatttggttctatgcccgcctg
aaagggctctccgagaagcacgtgaaagctgagatggagcagatggccttggatgttggg
ttgccgcccagcaaactgaaaagcaaaacaagtcagctgtcaggtggaatgcagagaaag
ctgtctgtggccttggcctttgttgggggatccaaggttgtcattctggatgagcccaca
gccggtgtggacccttactcccgcagggggatatgggagctgctgctgaagtaccgacaa
ggccgcaccattatcctctccacgcaccacatggatgaggcagacatcctgggggacagg
atcgccatcatttcccacgggaagctctgctgcgtgggctcctccctgttcctgaagaac
cagctggggacaggctactacctgaccctcgtcaagaaggacgtggagtcttccctcagc
tcatgcagaaatagcagtagcactgtgtcatacctgaagaaggtggtgtctgagcttccc
ccagctgggcagagtggaggcacaggaggagaggtgcagaggctggtggcgctgactcaa
gatgtctctgcgatctccaacctcatcaggaagcatgtggctgaggcccggctggtggaa
gacattgggcatgagctgacctacgtgctgccctacgaggctgccagagagggagccttt
gtggaactcttccacgaaattgacgaccggctctcagacctaggcatctccagttacggc
atctcagagactactctggaagaaatatttctcaaagtggctgaagagagtggagtggat
gccgagacctcagatggcaccttaccagcaagacgaaacagacgagtctttggggacaag
cagagctgtcttcgcccttttactgaagacgatgctatggatccaaatgattctgacata
gatccagaatccagagaaacagacctgctcagtgggatggatggtaaaggttcctaccag
gtgaagggctggaagctcacacagcagcagtttgtggcccttttgtggaagagactgctg
attgccagacggagtcggaaaggattctttgctcagattgtcctgccagctgtgtttgtc
tgcatcgccctggtgttcagcttgattgtgccgccctttggcaagtaccccagcctggaa
cttcagccctggatgtacaatgaacagtacacatttgtcagtaatgatgcacctgaggat
gtgagcacccaggaactcttaaatgctctcaccagaatgcctggctttgggacccgatgt
atggaaggaaacccgatcccagaaaggccctgcttggtgggagaggagaagtggaccact
gccccagtcccccagaccatcacggacctcttccgaaatggaaactggacaatggagaac
ccctcccccacctgccagtgtagcagcgacaaaatcaagaagatgctgcctgtgtgcccc
ctgggggcaggggggctgcctcctcctcaaagaaaacagaatactgccgacatccttcaa
aacctcacgggaagaaacatttcggattatctggtgaagacatacgtgcagatcatagcc
aaaagcttaaagaacaagatctgggtgaatgagtttaggtatggtggattttccctgggt
gccagtaattctcagtcacttcctccgagtgaagaagttaatgatgccatcaagcgaatg
aagaaacacttgaaggtggtcaaggatagttctgcagaccgatttctcagcagcttggga
aggttcatgacaggactggacacaaaaaataacgtcaaggtgtggttcaacaacaagggc
tggcacgccatcagctctttcttgaatgtcatcaacaatgccattctccgggccaacctg
cagaagggagcaaaccccagccagtatgggattactgctttcaatcacccgctgaacctc
accaagcagcagctctcggaagtggctctgatgaccacatccgtggacgtccttgtgtcc
atctgtgtcatcttcgcgatgtccttcgtcccggccagctttgtcgtgttcctgatccag
gagcgcgtcagcaaagcgaagcacctgcagttcatcagcggagtgaagcctgtcatctac
tggctctccaattttgtctgggacatgtgcaactatgtggttcctgccacgctggtcatt
atcatcttcatctgcttccagcagaagtcctatgtgtcctccaccaacctgcctgtgctc
gctcttctacttttgctgtatgggtggtccatcacacctctcatgtacccagcctccttc
gtgttcaagatccccagcacagcctacgtggtcctcaccagcgtgaacctcttcatcggc
atcaatggcagtgtggccacatttgtgctggagctcttcaccaacaataagctgaataac
atcaatgatatcctgaagtccgtgttcttgatcttcccacatttttgcctgggacggggg
ctcattgacatggtgaaaaaccaggcaatggctgacgccttggaaaggtttggggagaac
cgctttgtctcaccactgtcttgggacttagtgggacgaaatctcttcgccatggctgtg
gaaggagtggtgttcttcctcatcactgtgctgatccagtaccgattcttcatcaggccc
agacctgtaaaggcaaagcttcctcctctgaatgatgaggatgaagatgtgaagagggaa
agacagagaattcttgatggtggaggacagaatgacatcttggaaatcaaggagttgact
aaggtatacaggagaaagaggaaacccgctgttgacaggatctgcgttggcattcctcct
ggtgagtgctttggacttctgggtgttaatggagctgggaaatcatcaactttcaagatg
ttaacgggagataccactgttaccagaggagatgctttccttaacaaaaatagtatctta
tcagacatccacgaagtccatcagaacatgggctattgccctcagtttgatgccatcaca
gagctgctgactggaagagaacacgtggagttctttgcccttttgagaggagtcccggag
aaagaagtaggcaaggttggtgagtgggcgattcggaaactgggccttgtgaagtatgga
gaaaaatatgctgggaactacagtggaggcaataagcgcaagctctcaacagccatggct
ttgattggtgggcctccagtggtgtttctggatgaaccaaccacaggcatggaccctaaa
gcccggcgcttcctgtggaattgtgccctaagtatcatcaaggaagggagatcagtagtg
cttacctctcacagtatggaagaatgtgaagctctctgcactaggatggcaattatggtc
aatgggcggttcaggtgtcttggcagtgttcaacatctgaaaaataggtttggagatggt
tatacaatagttgttcgaatagcagggtcgaaccctgacctgaagcctgtacaggagttc
tttgaactcgcctttccaggaagcgtcctgaaggagaagcaccgaaacatgcttcagtac
cagcttccatcttcactgtcttccctggccaggattttcagcatcctttcccagagcaaa
aagcgactccacatagaagactactctgtctctcagacaacacttgaccaagtatttgta
aacttcgccaaggaccaaagtgacgatgaccacttaaaggacctgtcattacacaaaaac
cagacagtagtggacgttgcagtcctcacatctttcctgcaggatgagaaagtgaaagaa
agttatgtatga
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integrated database retrieval system
