KEGG   Bubalus bubalis (water buffalo): 102400103
Entry
102400103         CDS       T05912                                 
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
  KO
K16796  transcription factor SOX2 (SOX group B)
Organism
bbub  Bubalus bubalis (water buffalo)
Pathway
bbub04390  Hippo signaling pathway
bbub04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:bbub00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04390 Hippo signaling pathway
    102400103 (SOX2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    102400103 (SOX2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:bbub03000]
    102400103 (SOX2)
Transcription factors [BR:bbub03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    102400103 (SOX2)
SSDB
Motif
Pfam: SOXp HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 102400103
NCBI-ProteinID: XP_006056297
LinkDB
Position
1:complement(130731784..130734338)
AA seq 321 aa
MYNMMETELKPPGPQQTSGGGGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQR
RKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKT
KTLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQD
QLGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMA
LGSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQ
HYQSGPVPGTAINGTLPLSHM
NT seq 966 nt   +upstreamnt  +downstreamnt
atgtacaacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggc
ggcggcggcggcggcggcggcaactccaccgcggcggcggcgggcggcaaccagaagaac
agcccggaccgagtcaagcggcccatgaacgccttcatggtgtggtcccgcgggcagcgg
cgcaagatggcccaagagaaccctaagatgcacaactcggagatcagcaagcgcttgggc
gccgagtggaaacttttgtccgagacggagaagcggccgttcatcgacgaggccaagcgg
ctgcgagcgctgcacatgaaggagcacccggattataaataccggccccggcggaaaacc
aagacgctcatgaagaaggataagtacacactgccgggagggctgctcgccccgggcggc
aacagcatggcgagcggggtcggggtgggcgccggcctcggcgcgggcgtgaaccagcgc
atggacagctacgcgcacatgaacggctggagcaacggcagctacagcatgatgcaggac
cagctgggctacccgcaacacccgggcctcaacgcgcacggcgccgctcagatgcagccc
atgcaccgctacgacgtgagcgccctgcagtacaactctatgaccagctcgcagacctac
atgaacggctcgcccacctacagcatgtcctattctcagcagggcacccctggcatggcg
cttggctccatgggctcggtggtgaagtccgaggccagctccagcccccccgtggttacc
tcttcttcccactccagggcgccctgccaagccggggacctccgggacatgatcagcatg
tacctccccggcgccgaggtgccggagcccgccgcccccagcagacttcacatgtcccag
cactaccagagcggcccggtgcccggcacggccattaacggcacactgcccctctcgcac
atgtga

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