Bubalus bubalis (water buffalo): 102400161
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Entry
102400161 CDS
T05912
Symbol
DCHS2
Name
(RefSeq) protocadherin-23
KO
K16507
protocadherin-16/23
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04392
Hippo signaling pathway - multiple species
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04392 Hippo signaling pathway - multiple species
102400161 (DCHS2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bbub04515
]
102400161 (DCHS2)
Cell adhesion molecules [BR:
bbub04515
]
Cadherins
Cadherin related
102400161 (DCHS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Fibulin_C
Cadherin_2
Cadherin_pro
PepSY
Cadherin_4
TAS2R
Stevor
TMEM156
Motif
Other DBs
NCBI-GeneID:
102400161
NCBI-ProteinID:
XP_044786511
LinkDB
All DBs
Position
17:complement(68999609..69265928)
Genome browser
AA seq
2701 aa
AA seq
DB search
MGAATLMSLFSHMVKASDADAGLYGFVEYFLYAGFQSYEAPQAFQIDPHDGRICVSQDTD
RERDPATYDLLVKAKDGGGLSAQAFVRVELEDVNDNEPVFNPLTYVTSLSGQAQLGTEVV
HVLATDRDSGKYGAVAYELVLGDLSSFFTIDSTTGIIYLTSTLSHLESTTLLLMVCARDG
GGLTSVTNAEVTIHILQTTLAPAEFERPKYTFSVYEDVAEDSPVGTVKAKESLNSSEPIF
YRISSGNLDGTFSIHPWLGTIRTQKPLDHEAQPVVVLTVQAQLGSSPACSSTEINITVID
VNDNPPVFPKASDEVTVSQSTLPGTALYRARAEDRDSGLNGLLRYSIARQSPSLFSMDAG
LGVVYLNRSLSGAQPQACTLTLVAQDLGVPSRASLLVLTVIIAGQERSPSLMFEHLVYQV
EVSESLSPMTPVLRIRAHPLGPQGAPPQLVYWLEPSTDSAAFGVHPFTGWIYLRRQLDYE
STQMYNFRVFAWIPEDKLSQNVSTSVTVHVLDENDNSPTFWHEVLFLKVQESPMPQGVIG
KITAIDRDSGKNGQLSYFLLSDEKFFKMNPNTGELISWVALDHEQRAHHQVAVLVSDHGS
PPRSATTLVHVSVTDINDNRPYFPQCLAGKELYIKVLEGQPVNMLVTTVFAKDLDEGNNA
EVIYSVSSEDSSDHFKIDANSGEIRTTRALSHDYGPSYRVTVIASDQGVPPLQGQAVINI
QVIPLSKGRTVISQNIRHLVIPENLKPTKVMSLIKSPDHLQRQHGGKLHFSIAADDKDGH
FEVDSSTGDLFLCKELDYEMMSHYLFRVVTKDHSRNPPVNSTVFLSVAVEDQNDHSPSFR
EEFIVISVAENTPVGTLVHIFNAKDGDGSFLNSRIQYFIEANHPGMNPFLIHPSSGTLVT
TSPLDRERVPTVVLTVTASDQAVNVTDRRLRSLMAKVVILDVNDHSPTFTSFPIAYVRED
AAVGSLVHRITAQDPDAGRNGRVTFSILSGNENMAFMLDESSGFLTTASPLDYEIKSQHI
LTLLALDGGTPTLSSSQTLTITVLDVNDEAPVFKQHLYEASVKENQNPGEFVTRVEAVDR
DSGINSKLQFEIMPGASFMLFQINSDTGEVVTATTLDREVQEVLTLRVLVRDGGAPALSG
TTVILCTVRDENDHAPEIVVPRDDIEVLENQEPGLVYTFLASDMDAGSNGAATYHIIDGN
TDEYFAINEMSGELSTTRALDREEVSNFTLLILCSDLGSPPQSSTAQLQVRVLDDNDHSP
SFPRLQYQASVREDAQVGTTVLVLSSADEDEGLNGQTMYSLVHEASGAFTIDPVAGTLRT
SRALDREARSEHVLKAVARDCGVQGSRSTTVVIKVHVTDVNDNSPVLEQNPLDIFLSSQS
PTNQTAAILRASDPDSGPNGTVTFSFAEPQSMLSINEYTGAIQLQQIPSSEYFPIWLQLK
AVDQGVPARTTTGLLVIHMEGEDVRISFSQHLYKGIVPENCEAGTSIVTIKAFAPDSIRD
SIKYSVFSGNEDGVFSLCSKSGEVTVKEPKFLDFEVRKEVQLIVLAESRGHRAYSKVAVF
IQDLNDHPPHFDQSVYQVSVSEGQFHNHHIVQVFATDLDSGSNGLVEYSILSGNQGNVFQ
MDPLSGVLTASVILDYEYTSAYSLIVQATDKGMPRLSDTTVIKIQVTDINDNAPTFLPSE
AVEIAENSLPGTIVTRISVYDVDSNPAFTFSFVKESNSGTKFAIDRNTGVVVLVETLDFE
EATKYELQIQISDLAHQTEGTVTVHVLDVNDNPPVFSQDSYQVTISELVPLGHPVLTVVA
TDVESSENMTYRILSSSKMFSVDPTNGTIFTINPVFLMERKSTIRFLVEASDGGFPDLKA
VTLVETEIQDMNNYAPEFAIEYYNLSLSEDTPVGSTLVTFSTIDCDWTRENTHVEYSIIS
GNSQNNFHVETSFIHSEYSYKQVGYLVLLHHLDREATASHELVLLAFDHGCPPLSSSATV
SIEVLDVDDNPPAFSSLEYYAHIKESAPPGSPIIVVSASDRDMGSHAEVSYYLTSGNEKQ
HFCLEEKTGVLSLIKPLDYEETIKFILTVQASDEERKHFSFAIVFVNVLDDNDHAPQFMF
PNLNCAVPENLPVFSTICSVNALDFDAGPYGDMTYSIVSPCPLPHETPHDHNFFLIDPLT
GDISAQQVLDYENDNKYCLIVQAKDKGDSTASLVVWVDVEGIDEFEPIFTQDQYFFNLPE
KSHVRHLIGRVEASDADAGVDGVILYSLETPSPFFSVNKTNGNIYLSRALPLIKSQVGKE
DTIEMKIIAHSPKMDSKFTSCTVFVNVSFSSEGKHSAGSASSFLISLTISFLVFLLLVFI
LIVLLLKHKQKDAINNYEEKKMSSSLDINLRLTRDASALKPFQKTNESGDKAVPVDSTPE
WLSLIRVMEKDIAHLYRHSNSSDHCSVEGETAEDKEIQRINEHPYRKDDDSTLSDQESRV
PDSGIPRDSDQLSCLSGGTDVMVTAETAETSHMFEEGDQGEGRGMTYVQNNVLPQPLKKR
EVKVDTQTDVRKETVFISSDQEAGCAALSAQKDSDHDVMMRYPWDYLLSWEPKFQPLASV
FNDIAKLKDEHLHMPGIPKEKKSFVFPPPLITAVAQHGIKAVPPRMPAITSRQVLQKYPH
SPIRYHHSSLPEDMTLSFSPSLSLLTTQTPAMTPLLSDGELFGTHLSGSCLEPKAADGVQ
I
NT seq
8106 nt
NT seq
+upstream
nt +downstream
nt
atgggcgctgcgacgctgatgtcgcttttttcacacatggtaaaagcctccgatgcagat
gcaggactctatggctttgttgagtattttctttatgctggattccaaagctacgaagca
cctcaagcatttcagatagacccacatgatgggcgcatctgtgtttctcaagacactgac
agggaaagagatccagccacctatgatctcttggtgaaagctaaggatgggggtggactc
agtgcccaagcttttgttcgtgtggaactggaggatgtaaatgataatgaacctgtgttt
aacccattaacctatgtgacgagccttagtggccaggcgcagctgggcaccgaagtcgtc
catgttcttgccacagacagggattctggaaagtatggagcagtggcctatgagctcgtc
cttggagacctgtcatcctttttcaccatcgactccaccacagggattatttacttaaca
tcaactcttagtcatttggaatccaccacacttctgctgatggtctgtgctcgagatggt
ggtgggctcacatctgtcactaatgctgaagtcaccatacatattctccagacgactctg
gcacctgctgaatttgaaaggcctaagtacactttctctgtttatgaagatgtggctgaa
gacagtcctgtgggaacagtgaaagctaaagagtccttgaattcctccgagccaattttt
tataggatctcctctggcaatctggacggcacgttctccattcacccatggctgggcacc
attcgaacccagaagcctctggatcacgaagcgcagcccgtggttgtgcttaccgtccag
gcacagcttggcagctcccccgcctgcagcagcacagagatcaatataaccgtcatcgat
gtcaatgacaaccccccggtgtttcccaaagcctccgatgaggttacagtgtctcagagc
acgctgcctggcacagccctataccgtgcccgtgcagaagacagagacagcgggctcaac
gggctcctccgctactccattgcgcgccagagcccgagcctcttttccatggacgcgggg
ctcggcgtggtgtacctcaaccggagcctgtctggcgctcagccgcaggcgtgcacgctg
accctggtggcccaggacctcggcgttccttctcgggcctccctgctggtgctgacagtc
attatcgcgggacaggagcgaagcccgtctttgatgtttgagcatttggtctatcaagtg
gaagtgagtgagtcgctctcgccaatgaccccagtcctgcgcattcgggcccacccattg
ggcccgcagggagctcccccgcagctcgtgtactggttggagcccagcacggattccgct
gcgtttggcgtccatcctttcacaggttggatttatttgcggcgacagcttgactatgaa
tccacgcaaatgtataattttagagtttttgcctggatcccagaggacaaattgtcacaa
aatgtgagcacttcagtaactgttcatgtcctggatgagaatgacaattcccctaccttc
tggcacgaggtactgtttttgaaagtccaggagagtcctatgccccaaggggtaataggc
aaaatcacagcaattgacagagactccggaaagaatggacagctatcatatttccttttg
tccgatgaaaaattcttcaagatgaatcctaatacaggggagctgatcagctgggtggcc
ctggatcacgagcagcgcgcgcaccaccaggtcgccgtcctggtgagcgaccacggctcc
cctccgcgcagcgccaccacgctggtgcatgtctcagttactgacatcaatgacaacagg
ccgtatttcccacagtgcctcgctgggaaggaactgtacatcaaggttctggaaggtcag
ccagtaaatatgttggttacaactgtgtttgcaaaggatcttgatgagggaaacaatgca
gaagttatatattcggtatcttcagaagatagttctgatcacttcaagattgatgccaac
agtggtgaaataagaacgactcgagcactttcacacgattacggaccttcttacagggtg
actgtaattgccagtgaccagggagtgcctcctcttcaaggacaggcagttattaatatt
caggtgataccactatccaaagggagaactgtcatttctcagaatattagacatttagtt
ataccagaaaacttgaagcctacaaaagtaatgagcttgataaagtcacctgatcacctt
caacgacagcatggtggaaagttgcattttagtatcgctgcagatgacaaggatggtcac
tttgaagtggacagctcaacaggagacttgttcctctgtaaggaactggattatgaaatg
atgtctcattatcttttcagggtggtaactaaagaccatagcagaaaccctcctgtgaat
agcacagtcttcctgagtgttgctgtggaagatcagaatgaccattccccatctttccgg
gaggagttcattgtgataagtgtagcagagaacacccctgttggcactctggtgcacatc
ttcaatgccaaagatggtgacggcagttttttgaacagtagaatacagtacttcattgaa
gccaaccaccctggaatgaatccatttctcatccacccctcatctggcactttggtcacc
acgtctccccttgacagagagagagttccaactgttgtcctgacagtaaccgcatcggac
caggctgtgaacgtgacggaccggcgattgagatcactgatggcgaaggtagtgattctg
gatgtgaatgaccacagtcccacttttacgtctttccccatcgcctatgtcagagaggat
gctgcagtgggctccttggtgcatcgcataactgctcaagatccagatgcaggaaggaat
ggaagagtaacatttagcatcctctcaggaaatgaaaacatggcctttatgctagatgag
tcatcaggttttctaactactgcttctcctttggattatgagataaaaagtcagcacatt
ctgacccttctggcactggatggtggtacaccaacactttcttcatcccagactttgaca
attactgttcttgatgtaaatgatgaggccccagtatttaagcagcacctgtatgaagct
tcagttaaagaaaatcaaaatccaggagagtttgtcacaagagttgaagctgtggacaga
gattcaggaattaattccaagcttcagtttgaaattatgccaggtgcttcattcatgttg
ttccagataaattctgacactggggaggtagtgacggccaccacgcttgacagagaagtt
caggaagtcctcacccttcgagtactcgtacgtgacgggggagcccctgctctgtccggg
accacagtgattctctgcacagtgagagatgaaaatgaccacgcaccagagattgttgtc
cccagggatgacattgaggttctggaaaaccaagagccaggccttgtctacaccttcctg
gcttctgatatggatgctggcagcaatggagctgccacgtatcatataatcgatggaaat
actgatgagtactttgctattaatgaaatgtcgggagaactctcaaccactcgcgctttg
gaccgggaggaagtcagcaacttcaccctcctcatcctgtgctcggatctggggagcccg
ccgcaaagctccacggcgcagctgcaggtcagagttctggatgacaacgaccacagccct
tccttccccaggctgcagtaccaggcttctgtgagagaggacgcacaggtgggaaccacg
gttctcgtgctctcctccgctgacgaggatgagggcctgaacgggcaaaccatgtattct
ctggtgcatgaggcttccggggcgttcaccatcgaccctgtagcaggcacactgagaacc
agccgcgcccttgaccgggaagccaggtctgagcacgtattgaaggctgtggctagagac
tgtggtgtccaaggctcacgaagcaccacggtggttataaaagtacatgtcactgatgtt
aatgacaacagtccagttttggaacagaacccccttgatatttttctttcctctcagtca
cctacaaaccaaacagctgccatcctcagagccagtgacccagactcggggcccaatggc
accgtcacgttcagcttcgcagagccccagtcaatgctttctattaatgaatacacagga
gccattcaacttcagcaaattccgtcttcagaatattttcctatttggctgcagttaaaa
gctgtggatcaaggggtcccagctaggacaaccactggtctcctggtcattcacatggaa
ggagaagatgtaaggatctccttcagccagcatctgtataaagggatcgtgcctgaaaat
tgtgaggcaggtacttctattgtgactataaaagcttttgctccagactcaattcgggac
agtattaaatattcagtttttagtggaaatgaagatggagttttttccttgtgttctaaa
tcaggagaagttactgtgaaagaacccaagtttcttgattttgaagtcagaaaagaagtt
caactcatcgttttagctgaaagtagggggcatagagcctacagcaaagtagcggtcttt
atccaagatctgaacgatcatccaccacactttgaccaaagcgtttaccaagtatcagtg
tctgagggccagttccacaatcatcacattgtacaggtgtttgccacagacctggacagt
gggtcgaatggcctcgttgagtattccattctctctggcaaccaaggaaacgtgttccaa
atggatccactgagtggtgtgctaacagcaagtgtgattctggattacgagtacaccagc
gcctacagtttgattgtacaagcaacagataaaggcatgcccaggctttctgatacaact
gtgatcaagatacaggtgactgacataaatgacaatgccccaacttttctcccctctgaa
gcagtggaaattgccgaaaattctttgcctggcacgattgtgactcggatatcagtttat
gatgtggattcgaatccagctttcaccttcagttttgtcaaagagagtaattctggaacc
aagtttgctattgatcggaacactggggtagtggtgctggttgaaacactggattttgag
gaagctactaaatatgagctgcagatccaaatttcagatttggcacaccaaacagagggg
acagtcactgtccatgtgctggacgtcaacgataacccaccagtattttctcaggattct
taccaggtcaccatttctgaactggtgcctctggggcatccagtgctgaccgttgtggcc
acagacgtggaaagcagtgagaacatgacttacaggatcctctcctcttccaagatgttt
tcagttgatcctaccaatggcacaatatttactatcaatcctgtcttccttatggagaga
aaatcaacaattcgatttcttgttgaagccagtgatggtggattccctgacctgaaggct
gttaccttagtggagacagaaatacaagatatgaacaattatgcccctgagtttgcaata
gaatattataatcttagcttaagtgaagacactccagttggaagcacacttgtcaccttc
tcaaccattgactgtgactggacccgtgaaaacacacatgttgaatattctatcatcagt
ggtaattcacagaacaatttccatgtggaaactagttttattcattcagaatattcttat
aagcaagttggttatctagtgttgcttcaccatctggacagagaagcaactgccagtcat
gagcttgtccttctggcatttgaccatggttgccctccactgagttcctcagccactgta
tcaatagaagtcctcgatgtggatgataacccacctgcattcagcagtctggaatattat
gcccacatcaaggaaagtgcccctccagggagtcccatcattgtggtctcagcgagtgac
cgtgacatgggctcacatgcggaagtcagctactacttaacctctggaaatgagaagcag
catttttgcttagaagaaaaaactggagttctttctttgattaaaccactagattatgaa
gaaacgataaaatttattttaactgtccaagcttcagatgaggaaaggaagcatttctct
tttgcaattgtgtttgtcaatgtcctggatgataatgatcatgcacctcagtttatgttc
ccaaacttgaactgtgctgttcctgaaaatctacctgttttctccaccatatgttctgta
aatgctttggattttgatgcaggtccttatggagacatgacctattctattgtatcaccc
tgtcctctccctcatgaaacgccacatgatcataacttcttcctcattgaccctttaaca
ggggatattagtgcccagcaagtccttgactatgaaaatgacaacaaatactgcctcata
gttcaggccaaagacaagggtgactcaacagcctccttagtggtttgggtggatgttgaa
gggatagatgagtttgaacccattttcactcaggatcaatattttttcaacctcccagaa
aagagtcatgtaagacatttgattggcagagtggaagcatcagatgcagatgctggtgtt
gacggagtcatcctttactcccttgaaactccatctcctttcttttcagtaaataaaact
aatggaaatatttatttgagtagagcacttcccctaataaaaagtcaagttggcaaagaa
gacaccattgaaatgaagataattgctcatagccccaaaatggactccaagtttacatct
tgtactgtttttgtgaatgtgtctttttcctcagaagggaaacattctgcaggatcagct
agcagctttttgatcagtctcaccatctcctttctagtgtttttgttgcttgtcttcatt
ctaattgtactgcttttaaaacataaacaaaaagatgcaataaataattatgaagaaaag
aaaatgtcatcatccttagatatcaatttgagactgaccagggatgccagtgcactgaaa
cccttccagaaaactaatgaaagcggtgataaggcagtgcctgtggactccacacctgaa
tggttgagtttaataagagtcatggagaaggacattgcacatctgtataggcactcaaac
tccagtgatcactgttctgtggaaggagagacagcagaagataaggaaatccagaggata
aatgaacacccttacagaaaggatgatgactcaactttgagtgatcaggagtccagggtg
ccagactctgggattccaagggactcagaccagctctcttgtttgtctgggggaactgat
gtgatggtcactgctgaaacagcagaaaccagccatatgtttgaggaaggagatcaagga
gagggccgtggcatgacctatgttcaaaataatgtcttaccccagccactgaagaagaga
gaggtaaaagtggacacccagactgatgtcagaaaagagactgtctttatttcaagtgat
caggaagcaggatgtgcagctctctcagcccagaaagactctgatcatgatgtcatgatg
agatatccctgggattatctccttagttgggaacccaaattccaacctcttgcctcagta
tttaatgatattgcaaaactaaaggatgagcatttacatatgcctggcattccaaaagag
aagaaatcttttgtttttccaccccctttgataacagcagttgcccaacatgggattaaa
gcagttccaccaagaatgccagccataacttcaaggcaggtacttcagaaatacccacac
tcccccattcgctatcatcacagttctctgccagaagacatgactctcagtttttcccca
tctctttcactactgaccacacagacccctgccatgactcccctgctgtcagatggagaa
ttatttgggacacatttgagtggttcttgccttgaacctaaagcagcagatggagttcaa
atataa
DBGET
integrated database retrieval system
