Bubalus bubalis (water buffalo): 102400536
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Entry
102400536 CDS
T05912
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
102400536 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbub03400
]
102400536 (XPC)
DNA repair and recombination proteins [BR:
bbub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
102400536 (XPC)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
102400536
NCBI-ProteinID:
XP_044789765
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Position
21:57909262..57932883
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AA seq
933 aa
AA seq
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MARKRAAGRGSRGQKAKGETKARRKEEEADVFEDEKPLKKSPPTKVSRGKRKRGCGDAGG
SADGPVRRKAAKVSVKSEEPQVIKDEALSDGEDFRGLPSARRKGQPPEREAAADKGSCKG
DDEEDSEEDWEEVEEVSEPVPGDVGESAAFSASALPVKPVEIEIETPEQVKARERSEKIK
MEFETYLRRMMKRFSKEVHEDTHKVHLLCLLANGFYRNSICNQPDLQAIGLSIIPTRFTK
VPPRDVDVSYLSNLVKWFIGTFTVNAELSTNEQDGLQTTLERRFAIYSARDNEELVHIFL
LLLRALHLPTRLVLSLQPVPLKLSAAKAKKPCKERSTEAPGGSSEAASHAPGKPSGRSRG
EDASSGGAGGARARGKGGKAAAGRRPRGESPSSGEDAGQARGQRRGAQRRAQARRRRAAA
KVSYKEESGSDAASTASDFEPSSEDSCRSSDDEDSEPGLPRPRRAPAPQRTKAGSKSRSK
SQHGSRGPPPGFAEASASAAGSKPKGGKKPSGDGGKAGGQGAAGVDQWLEVFSEREEKWV
CVDCVHGVVGQPLTCYQYATKPVTYVVGIDGAGCVRDVTQRYDPAWLTATRKSRVDAAWW
AETLRPYRSPLVDREQREDQEFQAKHLDQPLPTVIGTYKNHPLYALKRHLLKYEAIYPET
AAVLGYCRGEAVYSRDCVHTLHSRDTWLKQARVVRLGEVPYKMVKGYSNRARRARQAEPQ
LHDYNDLGLFGRWQTEEYQPPVAVDGKVPRNEFGNVYLFLPSMMPVGCVQLNLPNLHRVA
RKLNIDCAQAVTGFDFHKGYCHPITDGYVVCEEYRDVLLTAWENEQALIEKKEKEKREKR
ALGNWKLLVKGLLIRERLKLRYGAQSEAATPHTDAGGGLSSDEEEGTSSQAEAARILAAS
WPQNREAEKPKCPRKTRREKKEAAAHLFPFEKL
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggctcggaaacgcgcggctggccggggttcccgcggccagaaggccaagggcgaaacc
aaagcccggcgcaaggaggaggaggcggatgtcttcgaagatgagaaaccgctaaagaag
agccctcccacaaaagtttcccgaggaaagaggaagagaggctgtggtgatgctgggggc
tcagcagacggtccagtgagaaggaaggcggccaaggtttcagtgaaatctgaagagccc
caggttataaaggatgaagccctcagcgatggggaagatttcaggggcttgccgagcgcc
cgcaggaagggccagcccccggagagagaggccgctgcggacaaaggcagctgcaagggg
gacgacgaggaagacagtgaggaggactgggaagaagtagaagaagttagtgagcccgtg
ccgggtgacgtgggggaaagcgcagccttctctgcatctgctctgcccgtgaagccagtg
gagatagagattgagacaccggagcaggtgaaggccagagaaagaagtgaaaagatcaaa
atggagtttgagacatatcttcggaggatgatgaaacgtttcagtaaggaggttcacgag
gacacgcacaaggttcatctgctgtgtctcctggcaaacggcttctaccgaaacagcatc
tgcaaccagccagacctgcaagccattggcctctccatcatcccaacgcgcttcaccaaa
gtgccaccccgagatgtggacgtctcctacctgtccaacctggtgaaatggttcatcgga
acgtttacagtgaatgcagaactctcgaccaacgagcaggacggcctgcagacgacgctg
gagcggagatttgctatttactcggcaagagacaacgaggagctggtccacatatttctg
ctgcttctccgggccctgcatctccctacccgcctcgtactgtctctgcagccagttcct
ctgaagttatcagcagcaaaggcaaagaaaccttgcaaggaaagatccacagaggcgcct
gggggctcctcagaagctgccagccacgctcctggaaagcccagcggaagaagccgagga
gaggacgcgtcttctgggggcgctggtggggcccgtgccagagggaaggggggcaaagcg
gccgcaggcaggaggccgcggggggagtccccgtccagcggggaggacgcgggccaggct
cgggggcagaggcggggggcccagaggcgagcgcaggcccggaggcggcgggcggccgcc
aaggtgtcctacaaggaggagagcgggagtgacgcagccagcactgcctctgactttgag
ccttccagcgaggacagctgccgctcgtccgacgacgaggattccgagcccggcctgccg
aggccgcggagggcccccgcccctcagaggacgaaggcagggtccaagagcaggtccaag
tcccagcacggaagccgcggtccgccccctggcttcgcagaagcatcggcgagcgctgcg
ggcagtaagccgaagggaggcaagaagccgtcgggggacggcgggaaggcaggcggacag
ggagcggccggcgtggaccagtggctggaggtgttctcggagcgcgaggagaagtgggtg
tgtgtggactgcgtgcacggcgtggtgggccagcccctgacctgctaccagtatgccacc
aagcccgtgacctacgtcgtggggatcgacggcgccggctgcgtgcgcgacgtcacgcag
aggtacgaccccgcctggctgacggcgacccgcaagagccgcgtggacgctgcctggtgg
gcggagaccctgcgcccctaccggagcccgctggtggacagggagcagcgggaggatcag
gagtttcaggcaaagcacctggaccagcctctgcccaccgtcatcggcacatataagaac
caccctctctacgctctcaagaggcacctcctcaagtacgaggccatttaccccgagacg
gccgctgttctcgggtactgccgtggggaggccgtctactccagggactgtgtgcacacg
ctgcactccagggacacgtggctgaaacaggcgcgcgtggtgcggctgggagaagtgccc
tacaagatggtgaaaggctactccaaccgggcccggagagcccgccaggccgagccgcag
ctgcacgactacaacgacctgggcctgtttggcagatggcagaccgaggagtaccagccg
ccggtggccgtggacgggaaggtgccccggaacgagtttgggaacgtgtacctgttcctg
cccagcatgatgcctgtgggctgcgtccagctgaacctgcccaacctgcaccgcgtggcc
cggaagctgaacatcgactgcgcgcaggccgtcaccggcttcgatttccacaaaggctac
tgccatcccataaccgacggctacgtggtctgcgaggagtacagagatgtgctcctgacc
gcctgggagaacgagcaggcgctcatagagaagaaggagaaggagaagagggagaagcgg
gctctggggaactggaagctgctggtcaaagggctgctgatccgggagcggctgaagctt
cgctatggggcccagagtgaggcggccactccccacacggatgcgggaggcgggctctca
tcagacgaggaggaggggaccagctctcaagcagaagcggccaggatcctggcggcctcc
tggccccaaaaccgagaggctgagaagccaaagtgccccaggaagaccaggagggagaag
aaggaagcggctgcccacctgttcccgtttgagaagctgtga
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