Bubalus bubalis (water buffalo): 102400599
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Entry
102400599 CDS
T05912
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear RNA export factor 3-like
KO
K14284
nuclear RNA export factor
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03008
Ribosome biogenesis in eukaryotes
bbub03013
Nucleocytoplasmic transport
bbub03015
mRNA surveillance pathway
bbub05014
Amyotrophic lateral sclerosis
bbub05164
Influenza A
bbub05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102400599
03015 mRNA surveillance pathway
102400599
03008 Ribosome biogenesis in eukaryotes
102400599
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
102400599
05168 Herpes simplex virus 1 infection
102400599
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102400599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102400599
03009 Ribosome biogenesis [BR:
bbub03009
]
102400599
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102400599
mRNA cycle factors
Stress granule specific factors
102400599
Ribosome biogenesis [BR:
bbub03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
102400599
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
Tap-RNA_bind
LRR_NXF1-5
NTF2
Motif
Other DBs
NCBI-GeneID:
102400599
NCBI-ProteinID:
XP_044792427
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All DBs
Position
X:88265995..88274447
Genome browser
AA seq
585 aa
AA seq
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MEHTDKVNLLQRRARSWGIYQRQHKYWSEQDTSQQHQGRHSEACDAHMDNQARHAPYAIP
PHHQRSSFQKQDQMHVNMETKQKPPERRMERNRQDKTFGNWFKIIIPFGIKYDEKWLLNC
ILKQFSVPFILVKVHSEKMQAQFFVENVNIACAWKNVNSKIFSEDNERISIFVEPCDTPQ
SVQKALKSEKVGQIKLPGDLITCHIGMTQNCRNGMAASLHIHSAIMPNLRTXLLSLDLSN
KKPYLVHGLSTLXENASTKNLNLSNTEVKASGEMDNSQQLEPEGMYADRNTMCTAFRDNY
TILELFPRLKSLDGQETLSGSKCAVEAPKRLPMYKGSFFGSDQVNSQILQFLQHYYLIHD
YGDRQGLLGFYHEEACFFLTIPFHSKDSGLSSTCAYFLDNRNMKTLKDPNLRVQMLKHTK
HDIMRALCALPKTQHDFSSFEVDMCFHTETMFCFSVSGVFKEVEGSSQGCVRAFTQTFIT
TPTSSSSLCIVNEELFVREASPSEAQRLHSPSQCLHCRPRSCSASPLSSRKWCGLSPPSV
ESPPIVSEVTSGFALSWEGAGRSGRVINGNLNVNCFPCLFQLFLP
NT seq
1757 nt
NT seq
+upstream
nt +downstream
nt
atggagcatactgataaagtgaaccttttacaaagaagagcacgaagctggggtatttac
caaaggcaacacaaatattggtctgaacaggacacttcccagcagcaccaaggtagacat
tcagaagcatgtgatgctcatatggacaaccaagcaagacatgctccatatgccattcca
ccccatcatcagagaagtagttttcagaaacaagaccaaatgcatgttaacatggagaca
aagcaaaagcctccagaaagaagaatggagagaaacagacaggataagacctttgggaac
tggttcaagatcatcattccctttggtataaaatatgatgagaagtggctgcttaattgc
attctgaagcaattcagtgtgcccttcattctagtcaaagttcactctgagaaaatgcaa
gcccagttctttgtagagaatgtcaacattgcctgtgcatggaagaatgtcaacagcaag
attttcagtgaggataatgaaagaatatctatctttgtcgaaccctgtgacacaccccag
tctgtgcagaaggcactgaagtctgaaaaggtgggacagataaagcttcctggagacttg
ataacctgtcatattggaatgacacagaactgtagaaatggcatggctgcttccctgcac
atccattcagcaatcatgcccaacttgaggacctagcttttgtccttggacctgagcaac
aagaagccctacctggtgcatggcctgtccaccctatagagaatgcttccaccaaaaact
tgaacctctccaacactgaggtgaaggcttcaggggagatggacaacagtcagcagctgg
aaccagaagggatgtatgcagacagaaatactatgtgcaccgctttccgtgataactaca
ccatcctggaattgttccccaggttaaaaagcttggatggccaggagacactctcaggtt
ctaaatgtgctgtggaagcccccaagcgcttaccaatgtacaagggaagtttctttggat
ctgatcaggtgaacagtcaaatcctgcaattcttgcagcactattacttgatccatgact
atggagatcgccagggactgctggggttttatcatgaggaggcctgcttcttcctgacca
ttccattccactccaaggactcaggcttaagcagcacgtgtgcatacttcttggacaaca
ggaatatgaagacgctcaaggaccccaacctgcgtgtccagatgctgaaacacacaaaac
atgacattatgcgtgccctctgtgcattacccaaaactcagcatgacttcagctcctttg
aggtggacatgtgtttccacacggaaacgatgttctgcttctctgtcagtggggtgttca
aggaagtggaaggaagttctcagggctgtgtgcgtgccttcacccagaccttcatcacta
ctcccaccagctcttccagtctttgtatagtgaatgaagagctgtttgtaagggaagcca
gtcccagtgaagctcagcgtctgcattctccatcccagtgcctacactgtcgaccacgtt
catgttccgcctctcccctgagtagcaggaaatggtgtgggctttctcctcccagtgtgg
aatcacctccaatagtctcagaagtgacttctgggtttgctttgagttgggagggagctg
ggaggagtggacgagtgattaatgggaacctgaatgtaaattgttttccttgtttatttc
agttatttctaccctga
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