Bubalus bubalis (water buffalo): 102400617
Help
Entry
102400617 CDS
T05912
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bbub03037
]
102400617 (IFT88)
Cilium and associated proteins [BR:
bbub03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
102400617 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_7
TPR_19
TPR_6
TPR_14
TPR_16
ANAPC3
TPR_10
TPR_11
TPR_CcmH_CycH
ARM_TT21_4th
ARM_TT21_5th
TPR-S
TPR_21
RPN7
ARM_TT21_C
TPR_15
HEAT_Nup120
HAT_PRP39_C
ARM_TT21_2nd
DUF6584
Motif
Other DBs
NCBI-GeneID:
102400617
NCBI-ProteinID:
XP_025118587
LinkDB
All DBs
Position
13:53813479..53874342
Genome browser
AA seq
825 aa
AA seq
DB search
MMQNVHLAPETDEDDLYSGYNDYNPTYDTEELENDAAFQQAVKTSHGRRPPITAKIPSTA
VSRPVATGYGSKTSLASSMGRPMTGAIQDGVTRPMTAVRAAGFTKGALRGSAFDPLGQSW
GPAPPLEARSEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVR
QREQVTRPENINLDLTYSVLFNLASQYSANEMYAEALNTYQVIVKNKMFSNAGRLKVNMG
NIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAISSFEHIMS
MAPNLKAGFNLILSYFAIGDREKMKKSFQKLIAVPLEIDEDDKYISPSDDPHTNLVIEAI
KNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDLEI
NKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAVNS
DRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDCSCTEALYNIGLTYKKLNRLDEALD
CFLKLHAILRNSAQVLYQIANVYELMEDPSQAMEWLMQLISVVPTDSRALSKLGGLYDSE
GDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLM
VASCFRRSGNYQKALDTYKDIHRKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRLEKM
KEIREQRIKSGRDSSGCPRGRRDGSAGSDSGQNCSAGSKGERLSAQLRALPGTDEPYESS
SNKEPDASYVDPLGPQIERPKTAAKKRMEEDDFADEELGDDLLPE
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaatgtacacctggccccagaaacagatgaagatgatctttattctggctat
aatgactacaatccaacctatgatactgaggaattggagaatgacgcagcctttcagcaa
gctgtgaaaactagtcatggcagaagacctccaataactgctaaaataccaagcacagca
gtttctagacccgtagctactggatatgggtccaagacctccctggcgtcgtcaatggga
agaccgatgacaggggctattcaggatggagttactagacccatgacagcagtgagagcc
gctggctttaccaagggagctttgagaggctctgcgtttgacccccttggacagtcgtgg
ggcccagcaccacccctggaggccaggagtgaagacagtccagaagaaaagatcagacaa
ttagagaagaaagtaaatgagttggtagaagaaagctgtattgctaacagctgtggagac
ttaaaattggccttggaaaaggcaaaagatgcaggcagaaaggagagagtcctggtgagg
caacgagaacaagttacaaggccagaaaacatcaacttggatttaacttactcagttctt
ttcaacttggccagtcagtattcagctaatgagatgtatgctgaagcactaaacacgtat
caagttatagtgaaaaataagatgtttagcaatgcaggacggttgaaagtgaatatggga
aatatttatttaaagcaaagaaattattccaaagccattaaattctaccgaatggcctta
gatcaaattccaagtgtccataaagaaatgaggattaaaattatgcagaacattggagtc
acatttattaaaactgggcagtattcggatgccatctcttcttttgagcacatcatgagt
atggctccgaatctgaaggcaggcttcaatctgattcttagttactttgccattggagat
cgagaaaaaatgaagaagtcattccaaaaactgattgctgttccactagaaattgatgaa
gatgataaatacatttcgccaagcgatgacccacatactaatttagtgattgaagctata
aaaaatgatcatctgagacaaatggaacgtgaaagaaaagccatggcagaaaagtatatc
atgacagctgcaaaactcattgctcctgtaattgaaacatcctttgctgtaggttatgac
tggtgtgttgaagttgtgaaagcctctcagtatgtagagctggcaaatgatctggaaata
aacaaagcaattacgtacctgagacaaaaggactttaatcaggctgtggagaccttaaaa
atgtttgaaaaaaaggacagtagagtgaagagtgcagctgcgaccaacctctctttcctg
tattacttggaaaacgaatttgcacaagccagtagctatgcagatttagctgtgaactct
gacagatataatccgtcggctcttactaataaagggaatacagtctttgcaaatggagac
tatgagaaggcagccgagttctataaagaggctctaagaaatgactgttcttgcactgaa
gcgctttataacattggccttacctataagaagctaaaccggcttgatgaagctttggac
tgtttcctgaaacttcatgcaatcctaagaaacagcgcccaagtcctttaccagatagca
aatgtatacgagttaatggaagatcccagtcaagctatggaatggttgatgcagctgatc
agcgttgttcccactgactccagggccctgtctaaactgggagggctgtatgacagcgag
ggggataagtcccaagcattccagtactactacgagtcgtataggtatttcccgtccaac
attgaggtcatcgagtggctcggggcctattacattgacacccagttttgtgaaaaagcc
attcagtactttgaaagagcttctcttatacagcctacacaagtgaaatggcagctgatg
gtagctagttgttttagaagaagtggtaactaccagaaagcattagacacttataaagat
attcacagaaaatttccagaaaatgtagaatgtctacgtttcttggtccgtctctgcaca
gacattggattgaaagaagttcaagaatatgcaacaaaactaaagagattggaaaaaatg
aaagaaatcagagaacagcgcatcaaatctggccgggacagcagcgggtgtccccgcggc
cggagagacgggagtgcaggcagtgacagtggccagaactgtagcgccggcagcaaaggc
gagcgactgagtgcccagctccgagcactgcctggcacagacgagccttatgagagcagc
agcaacaaggagccagacgcctcctatgtggatccgcttggccctcaaatagaaagaccc
aaaactgcagccaaaaagagaatggaagaggatgattttgctgatgaagagttaggagat
gatttgcttccagaatag
DBGET
integrated database retrieval system
