Bubalus bubalis (water buffalo): 102400748
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Entry
102400748 CDS
T05912
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03013
Nucleocytoplasmic transport
bbub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102400748 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
102400748 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102400748 (THOC1)
03041 Spliceosome [BR:
bbub03041
]
102400748 (THOC1)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
102400748 (THOC1)
Spliceosome [BR:
bbub03041
]
Complex C
Other components
EJC/TREX
102400748 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
102400748 (THOC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
Motif
Other DBs
NCBI-GeneID:
102400748
NCBI-ProteinID:
XP_006079267
LinkDB
All DBs
Position
22:26863545..26901130
Genome browser
AA seq
657 aa
AA seq
DB search
MSPTPPLFSLPEARTRFTKSTREALNSKNIKPLLNTFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVERNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDSKPTRAIRKRAAPE
DFLGKGPSKKILMGNDELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMV
ESEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPVTGDQIEVFANKLGEQWKVLAPYLEMKDSEIR
QIECDSEDMKMRAKQLLVAWQDQEGVHATPENLINALNKSGLSDLAESLTNDNETNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccgccgctcttcagtttgcccgaagcgcggacgcggtttacgaaatct
acgagagaggctctgaacagcaaaaatatcaagcccttgttgaatacctttagccagtta
cctggcagtgaaaatgaaaaaaaatgtacccttgaccaggcttttagaggtgttctagaa
gaagaaattataaatcattcatcatgtgaaaacgttttagctattatttctcttgctatt
gggggagtaactgaaggtatttgtacggcatctacaccttttgtattgttgggagatgtt
ttggactgtcttcctttggatcagtgtgacacaatattcacttttgtggaaagaaatgtt
gctacttggaaatcaaatacattctattctgctgggaaaaattatttactacgtatgtgc
aatgatctcctacgaagattatcaaagtcccagaatacagtcttctgtggacgaattcaa
ctctttttggccaggcttttccctttatctgagaaatcaggtcttaacttgcagagtcaa
tttaatctggaaaatgtcactgttttcaataccaatgagcaggaaagcacattgggtcag
aagcacacagaggacagagaagaaggaatggatgtagaagaaggtgaaatgggagatgat
gaagctccaacaacttgctccattccaattgattacaacctgtaccgaaaattttggtca
cttcaggattactttaggaaccctgtgcaatgctatgagaaaatctcatggaaaactttt
ctcaagtattctgaagaagtcctagctgtttttaagagttataaattagatgatactcag
gcctcaaggaaaaagatggaagaattgaaaacaggaggagagcatgtatattttgcaaaa
tttttaacaagtgaaaagttgatggatttacagctgagtgacagtaacttccgtcgacac
atcctgctgcagtatctcattttatttcagtatctcaaggggcaggtcaaattcaaaagt
tcaaactatgttttaactgatgagcaatcactctggattgaagatactacaaaatcagtt
tatcaactactatctgaaaacccccctgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagaaaactggaactcatggaaaaatgaaggctgcccaagttttgtg
aaagaaagaacatcagacagcaagcccacaagagcaatacggaaaagagcagcgccggag
gacttcctgggcaaagggcccagcaaaaaaattctgatgggcaatgatgagttaacaagg
ctttggaatctctgtcctgacaacatggaagcctgtaaatcagaaacaagggaatacatg
ccaactttggaggaattcttcgaagaagccattgaacaggcagaccctgaaaacatggtt
gaaagtgaatacaaggctgtgaacaactcaaattatggttggagagccctaagactgtta
gcacggagaagccctcacttcttccagccaaccaaccagcagtttaaaagtttgccagaa
tacctcgaaaacatggtaataaagctagccaaggaattaccacctccttctgaagaaata
aaaacaggtgaggatgaagatgaggaagataatgatgctttactgaaggaaaatgaaagt
cctgatgttcggcgagacaaacctgtaacaggggaccaaatagaggtatttgccaacaaa
ctgggtgaacagtggaaggtcctggctccttacttggaaatgaaagactcagaaattaga
cagatcgagtgcgacagcgaagacatgaagatgagagccaaacagctgctcgtggcctgg
caggaccaggagggagtgcacgcaacgcccgagaacctgataaacgcgctcaacaagtct
gggctaagtgaccttgcagaaagtctaactaatgacaatgagacaaacagttag
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integrated database retrieval system
