Bubalus bubalis (water buffalo): 102400772
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Entry
102400772 CDS
T05912
Symbol
COL9A2
Name
(RefSeq) collagen alpha-2(IX) chain isoform X2
KO
K08131
collagen type IX alpha
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04151
PI3K-Akt signaling pathway
bbub04510
Focal adhesion
bbub04512
ECM-receptor interaction
bbub04820
Cytoskeleton in muscle cells
bbub04974
Protein digestion and absorption
bbub05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102400772 (COL9A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102400772 (COL9A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102400772 (COL9A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102400772 (COL9A2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102400772 (COL9A2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
102400772 (COL9A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bbub00535
]
102400772 (COL9A2)
Proteoglycans [BR:
bbub00535
]
Extracellular matrix (ECM) proteoglycans
Others
102400772 (COL9A2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
102400772
NCBI-ProteinID:
XP_006061990
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Position
6:105434013..105449530
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AA seq
688 aa
AA seq
DB search
MAPAADPRSLLVLLQVLGLALAQIRGLPGEPGPPGPPGPPGVPGSDGIDGDKGPPGKAGP
PGPKGEPGKAGTDGPDGKPGIDGLTGAKGEPGPAGIPGVKGQPGLPGPPGLPGPGFAGPP
GPPGPVGLPGEIGLTGPKGDPGPEGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPAG
VKGPPGLQGVKGHPGRRGLLGDSGRQGKPGPKGDVGASGEQGIPGPPGPQGVRGYPGMAG
PKGETGPQGYKGMVGSIGAAGSPGEEGPRGPPGRAGEKGDVGSQGVRGPQGITGPKGATG
PPGIDGKDGTPGMPGVKGSAGQAGRPGNPGHQGLAGVPGMPGTKGGPGDKGEPGRQGFPG
VSGPPGKEGEPGPRGEIGPQGIMGQKGDHGERGPVGQPGPQGRQGPKGEQGPPGIPGPQG
LPGIKGDKGSPGKTGPRGGVGDRGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPSG
DAGAPGVQGYPGPPGPRGLVGDRGLPGQPGRQGVAGRDASDQHIEDVVLKMLQEQLAEMA
VSAKREALGATGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPKGKRG
EKGDQGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGAPGAPGEAGRPGLPGPIGLP
GFCEPAACLGASAYASGRLTEPGSIKGP
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcccccgcggccgacccccgtagcctcctggttctcctgcaggtgctggggctcgcc
ctggcgcagatcagaggtctgccaggagagccggggcctccggggcccccagggccaccg
ggagtgcctggatccgacggaatcgacggtgacaaagggccccctgggaaagctggccct
ccgggacctaagggagagcctggcaaagcaggaacagatgggccagacgggaagcccggg
atagatggtctaactggagccaagggggagcccggtcctgcagggatccctggagtcaag
ggccagcctgggctcccaggtccccctggcctgccgggccctggcttcgccggacctcct
ggaccacctggacctgttggcctccctggtgagattggactcaccggccccaagggggat
cctggaccagagggaccatcagggcctccgggaccccctgggaaaccgggccgccctgga
accattcagggtctggaaggcagcgcggatttcctgtgtccaaccaactgtccagcgggc
gtgaaagggcccccagggctgcagggcgtgaaggggcatccaggcagacgcgggcttctg
ggagattccggccgccaggggaagccgggtcccaagggagatgtgggtgcctctggagag
caaggcatccctggaccaccgggtccccagggtgtcaggggctacccaggcatggcagga
cccaaaggagagacgggccctcaggggtacaaaggcatggtgggctccatcggcgcagcc
gggtcacctggtgaggaaggtccacggggaccaccgggccgagctggagagaagggtgat
gtgggcagccaaggagttcgaggaccccagggaataacaggcccaaagggagcaactgga
cccccgggcatcgatggcaaggacgggaccccaggcatgcctggagtgaagggcagtgca
ggacaggcggggcggccgggaaacccaggccaccagggcctagcgggtgtgcctggtatg
cctgggacaaaaggaggccctggagacaagggtgagccaggccggcagggcttccctgga
gtctctggtccccccgggaaggagggagagccagggcctcgaggagaaatcggtccccag
ggcatcatggggcagaagggtgaccacggtgagagggggccagtgggacagccaggccct
caaggtcggcagggccccaaaggggaacagggtcctcccggaattccagggccccaaggc
ttgccaggcatcaagggagacaagggttccccagggaagaccgggccccgcggtggagtg
ggcgaccggggggtggctggcctcccaggagagaaaggcgagaagggcgagtcaggcgag
ccaggacccaagggacagcaaggagtccgcggagaacctggctaccccggccccagcgga
gatgcgggcgccccgggggtgcagggctacccggggcctccgggccctcgaggactggtt
ggagaccgaggcttgcccggacagcccgggaggcagggcgtggcgggccgagatgctagt
gaccagcacatcgaggacgtggtgctgaagatgctgcaagagcaactggcagaaatggct
gtgagtgccaagcgggaggccctgggtgcgactgggatgatgggtcccccaggaccccct
gggcctcctgggtacccaggcaaacagggaccccatgggcaccctggccctcggggtgtt
cctggcatcgtgggagccgtgggtcagattggcaacaccgggcccaagggaaaacgtgga
gagaagggtgatcagggagaagttggccgtgggcaccccgggatgcctgggcccccgggg
atcccaggactgcctggccggcctggtcaggcaatcaacggcaaagatggagatcgaggg
gctccaggggccccaggagaggcaggtcgacctggcctgccaggccccattgggcttcca
ggcttctgtgaacctgcggcctgccttggagcctcagcctatgcctctggacgcctcaca
gagcctggatccatcaaggggccatga
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