Bubalus bubalis (water buffalo): 102401008 Help Entry 102401008         CDS       T05912                                  Symbol THOC2 Name (RefSeq) THO complex subunit 2 isoform X8   KO K12879   THO complex subunit 2 Organism bbub  Bubalus bubalis (water buffalo) Pathway bbub03013   Nucleocytoplasmic transport bbub03040   Spliceosome Brite KEGG Orthology (KO) [BR:bbub00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     102401008 (THOC2)   09122 Translation    03013 Nucleocytoplasmic transport     102401008 (THOC2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:bbub03019]     102401008 (THOC2)    03041 Spliceosome [BR:bbub03041]     102401008 (THOC2) Messenger RNA biogenesis [BR:bbub03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      102401008 (THOC2) Spliceosome [BR:bbub03041]  Complex C   Other components    EJC/TREX     102401008 (THOC2)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     102401008 (THOC2) SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 Motif Other DBs NCBI-GeneID:  102401008 NCBI-ProteinID:  XP_006065057 LinkDB All DBs Position X:complement(131375208..131493067) Genome browser AA seq 1592 aa AA seqDB search MAAATVVVPVEWIKNWEKSGRGEFLHLCRILSENKSHDSSTYRDFQQALYELSYHVIKGN LKHEQASNVLSDISEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSD TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG QDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLESYMSMCE PQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEHK REIVEAKQIVRKLTMVVLSSDKIDEREKEKEKEEEKVEKPPDNQKLGLLEALLKIGDWQH AQSIMDQMPPYYAASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVSALQNKRAPKQ AESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGSKQEDKEKTEVIL SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVK VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDS LKYLTSLNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASFCGAVFRKYPIDLAGL LQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIR NTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQF GGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGS KQQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFYATFWSLTMYDLAVPHTSYE REVNKLKIQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEK DNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRV FSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRATGFD GGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNL GQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNAVASV QNGPGGGPSSSSIGSVSKSDESSTEDTDKSRERSQCGVKAVNKASSATPKGNSSNGNSGS NSKTVKENDKEKGKEKEKEKKEKTPATTPEARVLGKDGKEKPKEERPNKDEKARETKERT PKSDKEKEKFKKEEKAKDEKFKTTVPNVESKSTQEKEREKEPSRERDIAKEMKSKENVKG GEKTPVSGSLKSPVPRSDITEPEREQKRRKIDTHPSPSHSSTVKDSLIELKESSAKLYIN HTPPPLSKSKEREMDKKDLDKSRERSREREKKDEKDRKERKRDHSNNDREVPPDLTKRRK EENGTMGVSKHKSESPCESPYPNEKDKEKNKSKSSGKEKGGDSFKSEKMDKISSGGKKES RHDKEKIEKKEKRDSSGGKEEKKHHKSSDKHR NT seq 4779 nt NT seq  +upstreamnt  +downstreamnt atggcggccgcaactgtggtggttcctgtggagtggataaagaactgggagaaatcaggg agaggcgaatttttacatttatgccggatcctcagtgaaaataaaagccacgatagttca acttacagagatttccagcaagctctttatgaattatcataccatgtcattaaaggaaat ctaaagcatgaacaggcatctaatgttcttagtgacatcagtgaatttcgtgaggatatg ccctccattcttgctgatgtattctgcatattagatattgaaacaaattgtttagaagaa aaaagcaagagagattattttacacaattggtattagcatgtttgtatttagtttcagac acagttctaaaggaacgcttggatccagaaacattggaatcattagggcttatcaaacaa tcacagcaattcaatcaaaagtcagttaaaatcaagacaaaactcttttataagcagcaa aaatttaatttgttaagagaagaaaatgaaggttatgccaagctgattgctgaattgggg caagatttatctggaaatattactagtgatttaatcttagaaaatatcaaatctttaata ggatgctttaatctggatcccaatagagttctggatgtcattttagaagtgtttgaatgc aggccagaacacgatgacttctttatatctttattagaatcttacatgagtatgtgtgaa ccgcaaacactgtgtcatattcttgggttcaaattcaagttttatcaggaaccaaatgga gagactccttcatctttatacagagttgcagccgtacttctacaatttaaccttattgat ttagatgatctttatgtacatcttcttccagctgataattgcattatggatgaacacaaa cgagaaattgtagaagctaagcagatcgttagaaaacttacaatggttgtattgtcttct gataaaattgacgagcgagagaaagaaaaggaaaaagaagaggagaaagtggagaagcca cctgacaaccaaaaacttggtttgttggaagctttgttaaagattggtgattggcagcat gcgcagagcattatggatcagatgcctccatactatgcagcttcacataaactaatagcc cttgctatttgcaagctgattcatataactattgagcctctctatcgaagagttggcgtt cctaaaggtgctaaaggctcacctgttagtgctttgcaaaataagagagcaccaaaacaa gcagagagctttgaagatttgaggagagacgtcttcaatatgttctgttaccttggtccc cacctttctcatgatcccattttattcgcaaaagtggtgcggataggcaagtcatttatg aaggagtttcagtctgatggaagcaaacaagaagataaagaaaaaacggaagttatcctt agctgtttgcttagcattactgaccaggtattacttccatctctttctttgatggactgc aatgcttgtatgtctgaggaactatggggaatgtttaaaacatttccatatcagcataga tatcgtctgtatggccagtggaagaatgagacttacaacagtcatccacttttagtaaaa gttaaagctcaaacaatagacagagccaaatatatcatgaagcgtctaaccaaggaaaat gtgaagccttctggaagacaaattgggaagttgagccacagcaatccaaccattttgttt gattatatcttgtcacaaatacagaagtatgataacttgataacacctgtagtagattca ttgaaatacctcacttcgttgaattatgacgtcttggcctattgtatcattgaagcttta gctaatccagaaaaggagaaaatgaaacatgatgacacaaccatctcaagttggcttcag agtctggctagtttctgtggtgcagtttttcgtaaatatccaattgatcttgctggtctt cttcagtatgtggctaatcagctaaaggcaggcaaaagttttgacctgcttatactgaaa gaagtggtacaaaaaatggcaggaatagaaattacagaagaaatgacaatggagcaacta gaagccatgactggtggagagcaactaaaagctgagggtggttattttggccagataaga aacacgaaaaaatcctcccagagattaaaggatgcactattagaccatgatcttgctctt cctctctgcttgcttatggctcagcagaggaatggggtaatctttcaggaaggtggagag aaacatttgaaacttgtgggaaaactctatgatcagtgtcatgataccctggtacagttt ggtgggtttttagcatctaatctaagcacagaagattatataaagcgagtgccttcaatt gatgtgctctgtaatgaatttcacacacctcatgatgcagcatttttcctgtctaggcca atgtatgcacaccatatttcgtcaaagtatgacgaacttaaaaaatcagagaagggaagt aaacagcagcataaagttcataagtacatcacatcatgtgaaatggtgatggctcctgtt catgaagcagtggtttccttacacgtttccaaagtctgggatgacatcagtcctcaattc tatgccacattctggtcattgacaatgtatgaccttgcagttccacataccagctatgaa cgggaagtcaataaacttaaaatccagatgaaagcaattgatgacaatcaggaaatgcct ccaaataaaaagaaaaaagagaaggagcgatgtactgcccttcaggacaagcttctcgaa gaagaaaagaaacagatggaacatgtacagcgagttctgcagagactgaaactggaaaag gacaactggcttttagcaaaatctaccaaaaatgagaccatcacaaaatttctacagctg tgtatatttcctcgatgtattttttcagcaattgatgctgtttactgtgctcgttttgtt gaattggtacatcaacagaaaactccaaatttttccacacttctttgctatgatcgagtt ttctctgatataatttacacagttgcaagctgtactgaaaatgaagctagtcgatatggg agattcctttgctgcatgttagagactgtgaccaggtggcacagtgatagagccacatat gaaaaggaatgtggaaattatccaggattccttactatattacgagcaactggatttgat ggtggaaataaagctgatcaattagactatgaaaattttcgacatgttgtacacaaatgg cattacaaactaaccaaggcctcggtacattgccttgaaacaggcgaatatactcacatc aggaatatcttgattgtgctaacaaaaatacttccttggtacccaaaagttttgaatctg ggtcaggcattggaaagaagagtgcataaaatctgccaagaggaaaaagagaagaggcca gatctatatgcattggctatgggctactctgggcagttgaaaagtagaaagtcatacatg atacctgaaaatgagtttcatcacaaagacccccctccgaggaatgcagttgccagtgta caaaatgggcctggtggtgggccttcttcatcgtcgatcggaagtgtatctaagtcagac gaaagcagtaccgaggacactgataaatcaagggagagatctcagtgtggtgtgaaagct gttaataaagcttctagtgccacaccaaaagggaattcaagtaatggaaatagtggctct aacagcaaaactgttaaagaaaatgacaaagaaaaaggaaaagagaaagaaaaagagaaa aaagaaaagactccagctactactccagaggcccgagtacttggtaaagatggtaaagaa aaaccaaaggaagaacggccaaataaagatgaaaaagcaagagagacaaaggaaagaaca cctaaatctgacaaagagaaagaaaaattcaagaaggaagaaaaagctaaagatgagaaa ttcaagaccactgtcccgaatgtagaatcaaagtcaactcaagaaaaggaaagagagaag gagccgtccagagaacgagatatagcaaaggaaatgaaatcaaaggaaaatgttaaagga ggagagaaaacaccagtttctgggtccttgaaatcacctgttccccgatcagatattaca gagcctgaaagggaacagaaacgtcgcaaaattgatacccatccttctccatcacattcc tcaacagtaaaggacagtctcatcgaactcaaggagtcttcagcaaagctctacattaat catactcctccaccactgtccaagagtaaggagagagaaatggacaagaaagatttggac aagtcaagggaaagatccagagaaagagaaaaaaaagatgaaaaggacaggaaagagcgg aaaagggatcactcaaacaatgaccgagaagtgccaccggacttaaccaagaggcggaaa gaggaaaatggaacaatgggggtttcaaagcacaaaagtgaaagtccatgtgagtctcct tatccaaatgagaaagacaaggaaaaaaataagtcaaaatcttcaggcaaagaaaaaggc ggcgactcatttaaatctgaaaagatggataaaatctcctctggtggcaaaaaggagtcc aggcatgataaagaaaagatagaaaagaaagagaaacgggacagttcaggaggaaaggaa gagaagaaacatcataagtcctcggacaagcacagataa

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