Bubalus bubalis (water buffalo): 102401334
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Entry
102401334 CDS
T05912
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X3
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03013
Nucleocytoplasmic transport
bbub05014
Amyotrophic lateral sclerosis
bbub05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102401334 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
102401334 (NUP98)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102401334 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102401334 (NUP98)
03036 Chromosome and associated proteins [BR:
bbub03036
]
102401334 (NUP98)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102401334 (NUP98)
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
102401334 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
ANAPC3
Motif
Other DBs
NCBI-GeneID:
102401334
NCBI-ProteinID:
XP_006064810
LinkDB
All DBs
Position
16:complement(33392006..33478234)
Genome browser
AA seq
1791 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTKPG
GLFGTNSFSQPATSTSTGFGFGTSTGTSNSLFGTASTGTSLFSSQNNAFAQNKPTGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTTGLFGSSPATSSATGL
FSSSTTNSGFAYGQNKTAFGTSTTGFGTNPGGLFGQQNQTTSLFSKPFAQPTTTQTTGFS
FGSTSTLGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGASLFGQTSTGFGAVG
STLFGNNKLTSFGTSTTSAPSFGFGTNTSGNSIFGSKPGPGTLGTGLGAGFGTALGAGQA
SLFGNNQPKLGGPLGTGAFGAPGFNTTTATLGFGAPQAPVALTDPNASAAQQAVLQQHIN
SLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPATRVRPKALQ
TTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKKLVLKNLNNSSLFSPVNRDSEDLASPSD
YPENGERFSFLSKPVDENHQQDGEDDSLVSRFYTNPIAKPIPQTPESAGNKHNSSNSVDD
TIVALNMRAALRNGLEGSSEETSFHEESLQDDREEIENNTYHIHPAGIILTKVGYYTIPS
MDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNLDDIVHIRRKEVIVYLDDN
QKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSPDRLADINYEGRLEAVSRKQGAQFKEY
RPETGSWVFKVSHFSKYGLQDSDEEEEERPSKTSTKKLKTAPLPPAGQATPFQMALNGKP
APPPQSQSPEVEQLGRVVELDSDMVDITQEPVLDSMLEESMPEDQEPVSASTHIASSLGI
NPHVLQIMKASLLADEEDVDTVLDQRITHLPSKADTSQEICSPRLPISATHSSKPRSLVS
GLLQSKFTSGTFLSPSASLQECRTPRTSSLMNIPSTSPWSVPPPLTSVFTVPSPAPEFQL
KTVGTRRQPGLVPLKKSVTYGKGKLLMDMALFMGRSFRVGWGPNWMLANSGEQLSGSLEL
ENHQIADCMEYGFLPNPVAVKSLTESPFKVHLEKLSLRQKKLDKDLQLYQTSLELKLKHS
TVHVDELCPLIVPNPGVAVIHDYADWIKEASRDLLEPQIVKHWSLTWTLCEALWGHLKEL
DSQLDEPSEYIQILERRRAFSRWLSSTASPQIEEEVSLTRKDNPMEAVFSYLTGKRISEA
CSLAQQSGDHRLALLLSQLVGSQSVRELLTMQLVDWHQLQADCFIQEERLRIFALLAGKP
VWHLSEQKQINVCSQLDWKRSLAVHLWYLLPPTASISKALSMYEEAFQNTSEGDRYACCP
LPSYLEGSGYVVEEEQDSQRPLQDVCFHLLKLYSDRHYDLNQLLEPRSITADPLDYRLSW
HLWEVLRALNYTHLSEQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSSTREKAVRELL
TRHCQLLETPEAWAKETFLTEKLCVPAEWIHEAKAVRAHMESDKHLEALYLFKAGHWNRC
HKLVIRHLASDAIINENYDYLKGFLEDLAPLERSGLIQDWETSGLVYLDYIRVIEMLRHI
QQVDCSGYELEQLHTKVTSLCNRIEQIQCYNAKDRLAQSDMAKRVANLLRVVLSLQHASD
ATSDSTPDPQRVPLRLLAPHIGRLPMPEDYALEELRSLTQSYLRELTVGSQ
NT seq
5376 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataagtcatttggaacaccctttgggggtggcactggtggctttggcacaact
tcaacatttgggcagaatactggatttggcactactagtggaggggcatttggaacatct
gcatttggttctagcaacaatactggaggcctgtttggaaattcacagaccaagccagga
ggcttatttggtaccaattcatttagccagccagctacctccacgagcactggctttggg
tttggcacatcaacaggaacatcaaatagcttgtttggaactgcaagcacaggaaccagc
ctcttctcatcccaaaacaatgcctttgcacaaaataagccaacgggctttgggaatttt
ggaacaagtaccagcagtgggggactttttggaactacaaataccacctctaatcctttt
ggtagcacatctggctctctctttgggccaagtagttttacagctgctcctactgggact
actattaagtttaaccctccaactggtactgatactatggttaaagctggagttagcact
aacatcagtaccaagcaccagtgtattactgctatgaaagaatatgaaagcaagtcacta
gaggagcttcgtttagaggattatcaggccaaccggaaaggcccacagaatcaggtggga
gcaggtaccacgactggcttgtttgggtcttctccagccacctccagtgcaacaggactc
ttcagctcttccacaacgaattcaggttttgcatatggtcagaacaaaacagcctttgga
actagtacaactggatttggaacaaatcctggtggtctctttggccagcagaatcaaact
accagcctcttcagcaaaccatttgcccagcccacaaccacccagaccactggtttttcc
tttggtagtaccagcacactaggacagccaagcaccaacaccatgggtctgtttggagta
actcaagcctcacagccaggaggtctttttgggaccgctacaaacaccagcactgggaca
gcatttggaacaggagctagtctctttgggcagaccagtactggatttggtgctgttggt
tcgaccctgtttggaaataacaagcttacttcgtttggaaccagcacaaccagtgctcct
tcatttggattcggcacaaataccagtgggaatagtatttttggaagtaaaccaggacct
ggcactctggggactgggcttggcgcaggatttggaacagctcttggtgctggacaggca
tctttgtttgggaacaaccaacctaagctcggagggccccttggtacaggagcctttggg
gcccctggatttaatacaacgacagccactttgggctttggagccccccaggccccagta
gctttgacagatccaaatgcttccgctgcccagcaggctgttctccaacagcacatcaat
agtctgacatactcacctttcggagactctcctctcttccggaatcccatgtcagaccct
aagaagaaagaagagagattgaaaccaacaaatccagcagcccagaaggctctcactaca
cctactcattataaactgacaccccgccctgccaccagagtccgaccaaaggctttacaa
acaacaggcacagccaagtcacatctttttgatggactggatgacgatgaaccatcctta
gccaatggagcattcatgcccaagaagagcattaagaagttggttttgaaaaaccttaac
aatagcagtctgttctctcctgttaatcgtgattcagaagatctagcttcaccatctgat
tatccagaaaatggagagagattcagttttctgagcaaaccagtggatgagaatcatcag
caggatggagaagatgattctcttgtgtcacgtttttatactaaccctattgccaaaccc
attcctcaaaccccagaaagtgctggaaataaacataacagcagcaacagtgtagatgat
actatcgttgcattaaacatgcgtgctgccttgcgaaatggactggaaggaagcagtgaa
gagacctcttttcatgaggagtcactgcaggatgaccgagaagaaatcgaaaataatact
taccatatacatccagcaggcatcattctcactaaggttggctactatactattccatcc
atggatgaccttgctaaaattaccaatgaaaaaggagagtgcattgtctctgacttcact
attggtcgtaaaggttatggttcgatctattttgaaggagatgtgaatttgacaaatcta
aatttagatgacattgtacatatccgaaggaaagaagtgattgtctacttagatgataac
caaaaaccacctgtgggtgaaggactaaatagaaaggctgaggttacattggatggagtt
tggccaacagataaaacatctcgttgtttaataaagagcccggatcgacttgctgatatc
aactacgagggaagattggaagcagtttcaaggaaacagggagctcagttcaaagagtac
cgtcctgaaacgggttcttgggtgtttaaggtctctcatttttctaagtatggtcttcag
gattctgatgaagaggaggaggaacggccatccaaaactagtacaaagaagttgaagact
gcccctttacctcctgcaggccaggccaccccattccagatggctcttaatggcaaacca
gcacctccaccccagagccagagcccagaggtggagcagttagggagggttgtggaactg
gacagtgacatggtagatatcacccaggagccagttctggattccatgttagaagagagc
atgcctgaggatcaggaacctgtgtccgcctcaacacacattgcatcttcactgggaatt
aatccacatgtgttacagatcatgaaagcatcattgcttgctgatgaagaagatgtagat
acggtcctggatcagcgcatcactcaccttccttctaaagcagatacttctcaagaaata
tgttctcccaggctccccatctcagcaactcactcatcaaaacctcgttcattagtaagt
gggttactacaatcaaaatttacaagtgggactttcctttcaccaagtgcctctttacaa
gaatgtcgtactcccagaacatcatcgttgatgaatataccatccacatccccttggtct
gttcctccacccctgacttctgtgtttacggtgcccagcccagcccctgagtttcagttg
aaaacagtgggtacacgtagacaaccaggcctagtccctcttaaaaagtctgtcacctat
ggaaaggggaagctcctgatggacatggccctatttatgggacgatcatttcgggttggt
tggggccccaactggatgcttgctaatagtggagaacagctgagtggttctctggaactg
gaaaatcatcagattgctgactgtatggaatatggattcctgcctaatccagtagctgtt
aaatccctaactgagtctccattcaaagttcatttggaaaaacttagtttgaggcaaaag
aagctggacaaagacctgcaattataccagacatctctggagcttaaattaaaacatagc
actgttcacgtggatgagctgtgtcctcttattgtccccaatccgggagttgctgtcatt
catgactatgcagattggattaaggaagcatcgagagatttattggaaccacaaattgtg
aagcactggagcctaacatggacgttatgcgaagctctgtggggccacctaaaggagctt
gatagccagctggatgagcccagtgaatacattcagattctggagcgaaggagagctttt
tctcgctggctgtccagtactgcctcacctcaaattgaggaagaagtctccttgacccga
aaagacaaccctatggaggctgtcttcagctacctcacgggcaagaggatcagtgaggcc
tgctccctggcccagcagtcaggtgatcatcgtcttgctcttcttttatcccagttggtt
ggcagccaatcagttcgtgagctgcttactatgcagctggtggattggcatcaactccag
gctgactgcttcatccaggaggagagactgcgcatctttgccctcttggctggaaaaccg
gtgtggcacctctcagagcagaagcaaatcaatgtgtgctcccagttggattggaaacgc
tccctggctgtccatctttggtatttgcttccaccaacagcttccatttccaaggcgctc
agcatgtatgaagaagcatttcagaatacctctgagggtgacagatatgcctgctgtcca
cttccctcatacctggagggctctggatatgtggtagaggaggagcaagactcacagaga
cctcttcaagatgtctgctttcaccttttaaaactctacagtgacagacattatgacctc
aaccagctgctggagcctcgaagcataactgccgatcctttggactatcgcctaagctgg
cacttgtgggaggtgctgcgggctcttaactatacccatctctcagagcagtgtgagggt
gtgctgcaggccagttacgctggccaactggagagtgagggcctttgggagtgggccatc
tttgtcctcctgcacattgacaactcaagcacgcgggagaaggctgttcgagagctgctt
acccggcactgccagctgttggagacccctgaagcttgggctaaggagactttcctgacc
gagaagctttgtgtgcccgccgaatggattcatgaggccaaagcagtgcgagcacacatg
gaatccgacaagcacttggaggccctctacttatttaaagcaggacactggaacaggtgc
cacaagctcgtcatccggcacttagcttccgatgcaattattaatgagaactatgactac
ctgaaggggttcttggaagacctggcacctctggagcgcagtggcctaatccaggactgg
gaaacatctgggcttgtttacctggactacattagggtcattgaaatgctccgtcatata
cagcaggtggattgctcaggttatgaactcgagcagttgcacaccaaagtgacctcactg
tgcaacaggatagagcaaatccagtgttacaatgccaaggaccgcctggctcagtcagac
atggccaaacgtgtagccaacctgctgcgggtggtactgagccttcagcatgcctctgat
gcaacctccgactcaacgccagaccctcagcgagtccctttgcgcctgttggctccccac
attggccggctccccatgcctgaggactatgccttggaggaactgcgcagcctcacacag
tcctacctgcgggaactgactgtcgggagccagtga
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integrated database retrieval system
