Bubalus bubalis (water buffalo): 102401518
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Entry
102401518 CDS
T05912
Symbol
RRP12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bbub03009
]
102401518 (RRP12)
Ribosome biogenesis [BR:
bbub03009
]
Eukaryotic type
90S particles
Other 90S particles
102401518 (RRP12)
Pre-60S particles
Other pre-60S particles
102401518 (RRP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
102401518
NCBI-ProteinID:
XP_006061229
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All DBs
Position
23:complement(18812113..18841384)
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AA seq
1297 aa
AA seq
DB search
MGRSGKLPSGVSAKLKRWKKGHSSDSNPVICRHRQAARSRFFSRPSGKSDLTVDAVKLHN
ELQSGSLRLGKSEAPETAMEEEEEVTPAFTEKSSGTFLSGLSDCTNVTFSKVQRFWESNS
AAHKEICAVLAAVTEVIRSQGGKETETEYFAALMTTMEAVESTESLAAVAYLLNLVLKRV
PSPVLIKKFSDTSKAFMDIMSAQAISGSTSALRWVLSCLATLLRKQDLEAWSFPVTLQVY
HGLLSFTVHTKPKIRKAAQHGVCSIFKGSEFMFGEKAPAHHPAAVSTAKFCIQEIEKSGG
SKEATTMLHMLTLLKDLLPCFPEGLVKSCSETLLRVMTLNHVLVTACAMQAFHSLFHAKP
RASTLPAELNAQIITALYDYVPSENDLQPLLAWLKVMEKAHINLVRLHRDLGLGHLPRFF
GTATTCLLSPHLPVVTAATQCLQEILKECVAPHMADIGSVTSSASRPSQYIAKMFRAVEE
GLTYRFHAAWSSVLQLLCVFFEACGRQAHPVMKKCLQSLCDLRLSPHFPHTAALDRAVGA
AVASMGPEVVLEAVPLEIDGSEETLDFPRSWLLPVIRDHVRETRLGFFTAYFLPLATTLK
RKAMDLAQAGSTVESKIYDTLQWQIWTLLPGFCTRPTDVATAFKGLARTLGTAISERPDL
RVTVCQALRSLITKGCEAEADRAEVSRFAKNFLPILFNLYGQPAAAGDTPAPRRAVLETI
KTYLTITEPQLVNGFLEKASEKVLDASSSDFTRLSVLDLVVALAPHADEAAISKLYSTIR
PYLESKTHGIQKKAYRVLEEVCASPQGPGARFVQSHLDDLKKTLLDSLRSTSSPAKRPRL
KCLMHIVKKLSAEHEEFISALVPEVILCTKEVSVGARKNAFALLVEMGRAFLRFGPSQEE
ALQRYLILIYPGLVGAVTMVSCSILALTHLLFEFKGLMGTSTVEQLLENVCLLLASRTRD
VVKSALGFIKVAVVVMDVGHLAKHVQLVMGAIGKLSDDMRRHFRMKLRNLFTKFIRKFGF
ELVKKLLPEEYHKVLVNIRKAESRAKKHRALNQATVEEEEEEEEEPVQGKGDSIEEILAD
SEDEEDEEEERSRGKEQRRLAHQRSRAWLKEGGGDEPLNFLDPKVAQRVLATQPGPGRGK
KKDHGFKVSADGRLIIREEEDANTKMEEEEGAKGEDEEMADLMEDVGVKSKKHQKLKQKE
ADDEELEMPPQYQAGGSGIHRPVAKKTIPGAEYKAKKAKGDVKKKGRLDPYAYIPLNRTK
LNRRKKMKLQGQFKGLVRAAQRGSHAGHKLRRKDRRP
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgctcggggaagttgccctccggagtctcggccaagttgaaacgctggaagaaa
ggccacagcagcgacagcaacccggtcatctgccgccaccgccaggccgcccgcagccgc
ttcttcagccggccttcaggaaagagcgacttgacagttgatgcggtgaagttgcataat
gaactgcagtcagggtcgctgcgcctgggcaaaagcgaagcccctgagacggccatggaa
gaagaagaagaggtgacgccggctttcaccgagaagtcttctggcaccttcctgagcggc
ctgtctgactgcacaaacgtcaccttcagcaaagtgcagcgcttctgggagtccaactcg
gctgcccacaaggagatctgtgcggttttggctgctgtcacagaggtgattcgctcccag
ggtgggaaggagactgagactgagtactttgctgcgctgatgacaaccatggaagcggtg
gagtccacggagtctctggctgctgtcgcttacctgctgaaccttgtcctcaagcgtgtg
cccagtcctgtgctcattaagaagttctctgatacctccaaagccttcatggatatcatg
tcagcccaggccatcagtggctccacctctgccctccgatgggtcctctcctgtctggcc
acccttctgcggaagcaggacctggaggcctggagcttccctgtgaccctgcaggtgtac
cacgggctgctgagcttcaccgtgcacaccaagcccaagatccggaaggctgcccagcat
ggggtgtgctccatcttcaagggcagtgagttcatgtttggtgaaaaggcccctgcccat
caccctgctgccgtttctaccgccaaattctgcatccaggagatcgagaagtctggaggc
tccaaggaggccaccaccatgctgcacatgctgaccctgctgaaggacctactgccctgc
ttcccagaaggcctggtgaagagctgcagcgagactctcctgcgggtcatgaccttgaac
catgtgctggtgacagcctgtgccatgcaggcctttcacagcctcttccatgccaagccc
cgtgcaagtaccctgccggcagagctcaacgcccagatcatcacagccttgtacgactac
gttcccagcgagaatgatttacagcccctgctggcctggctgaaggtcatggagaaagcc
catatcaacctggtcaggctgcatcgggatctggggctgggccacctccctcgctttttt
ggaactgcgacgacctgcctcctctccccccacttgccagtggtaacagctgccacccag
tgcctccaggagatcctgaaagagtgtgtcgctccccacatggccgacattggctccgtg
acctcctcggcctcacgcccttcccagtacattgccaagatgttcagggcggtggaggag
ggcctgacgtacagattccatgcagcatggagctctgtgctgcagctgctgtgtgtcttc
ttcgaagcctgtgggaggcaggcccatcctgtgatgaagaagtgcctccagtcgctgtgt
gacctgcgcctctccccccacttcccccacacggcagctctggaccgcgcagtgggggct
gcggtggctagcatgggccccgaggtggttttagaggctgtgcctttggaaatcgacggc
tctgaagaaactctggatttcccccggagctggctgctgcccgtcatcagagaccacgtc
cgggaaacgcgacttggtttctttaccgcttatttcctgcctctggccaccaccctgaag
aggaaagcaatggacctggcccaggcaggcagcacagtggagtccaagatctatgacacg
ctacagtggcagatctggaccctcctgcctgggttctgcacgaggcccacagacgttgcc
accgccttcaaagggctggcacggactctgggcacggccatcagcgagcgcccagacctg
agggtcaccgtgtgccaggccctgcgcagcctcatcaccaagggctgtgaagcagaggct
gatcgtgccgaagtgagccgctttgccaagaactttctgcccatcctattcaacctgtat
gggcagcctgctgcagccggagataccccagctcctcggcgggccgtgctggaaaccatc
aaaacttacctcaccattactgagcctcagctggtgaatggtttcctggaaaaagccagt
gagaaggtgctggacgcctctagctctgacttcaccaggttgtctgtcctggacctggtt
gtggccttggctccgcatgctgatgaagccgccatcagcaagctctactccaccatccgg
ccctatctagagagcaagacccacgggatacagaagaaggcctaccgtgtgctggaggag
gtgtgtgccagcccccagggccccggggcccgcttcgtgcagagccacctagatgacctg
aagaagaccctgctggactccctgcggagcacctcctcgcccgccaagaggccccgtctg
aagtgcctcatgcatattgtgaagaagctctcggctgagcacgaggagttcatcagtgcc
cttgtcccggaggtgatcctctgtaccaaggaggtctcggtgggagctcggaagaatgct
ttcgcgctgctggtggagatgggccgcgctttccttcggtttggcccaagccaggaagag
gccctgcagcgttacctcatcctcatttaccctggccttgtgggcgcagtgaccatggtc
agctgcagcatcctggccctgacccacctcctcttcgagtttaaaggtctgatggggacc
agcacggtggagcagctgctggagaacgtgtgtctgctcctggcctcacgcacccgcgac
gtggtgaagtcggcgctgggcttcatcaaggtggcagtggtcgtcatggacgtggggcac
ctggccaagcacgtgcagctggtgatgggagccatcggaaagctctcggatgacatgcgg
cggcacttccgcatgaagcttcggaacctgtttaccaagttcatccgcaagttcgggttt
gagctggtgaagaaactgctgccggaggagtaccacaaagtcctggtaaacatccggaaa
gcagagtcccgggccaagaaacaccgggccctcaaccaagccaccgtggaggaggaagaa
gaggaggaggaggaacctgtccagggcaaaggcgacagcatcgaggagattttggccgac
tcagaggatgaggaggacgaggaggaggagcggagtcggggcaaggagcagcggagactg
gcccaccagaggagccgggcgtggctgaaggaggggggcggggacgagcccctcaacttc
ctggaccccaaggtggcccagcgagtcctggccacacagcctgggccaggccggggcaag
aagaaggaccatggcttcaaggtgagcgccgacggccggctcatcatccgagaggaggag
gatgccaacaccaagatggaggaagaggaaggcgccaaaggggaggatgaggagatggct
gacctcatggaagacgtaggcgtcaagagcaaaaagcaccagaagcttaagcagaaagag
gctgacgatgaggagctggagatgccccctcagtaccaagcgggaggctctggcatccat
cgccctgtggccaagaagactatccccggggctgagtacaaggcaaagaaagcaaagggt
gacgtgaagaagaagggtcggctcgacccctacgcctacatccccctcaacagaaccaag
ctcaaccgcaggaagaagatgaagctacaggggcagttcaagggcctggtgagagctgct
cagcgaggctcccacgcgggacacaagctccgcaggaaggatcgtcggccctga
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integrated database retrieval system