Bubalus bubalis (water buffalo): 102401884
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Entry
102401884 CDS
T05912
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X6
KO
K10779
transcriptional regulator ATRX
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102401884 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbub03000
]
102401884 (ATRX)
03036 Chromosome and associated proteins [BR:
bbub03036
]
102401884 (ATRX)
Transcription factors [BR:
bbub03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
102401884 (ATRX)
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
102401884 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
DUF6395
Motif
Other DBs
NCBI-GeneID:
102401884
NCBI-ProteinID:
XP_025132874
LinkDB
All DBs
Position
X:complement(67881509..68169070)
Genome browser
AA seq
2478 aa
AA seq
DB search
MTAEPMSESKLNTLVQKLHDFLAHSSEESEETSSPPRLVMNQSTDKVSGSGNNSDMMENS
REEGASSAEKSKSSGSSRSKRKPSIVTKYVESDDEKTLDETVNEDASNENSENDITMQSL
PKGTVIVQPEPVLNEDKDDFKGPEFRSRSKMKTENLKKRGEDGLHGIVSCTACGQQVNHF
QKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCK
KCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVTACNSVFENLEQLLQQNKKKIKVD
NEKTSKVYEHAPRFSPKKNSSNCNGEEKKLDDSYSGSVTYSYSALIVPKDMIKKAKKLIE
TTANMNSSYVKFLKQATDNSEINSATKLRQLKAFKSVLADIKKAHLALEEDLNSEIQALD
AINKEKNTKEHKVIDAKSETKVRKGEKPCVLERKDISKSEGKLSRKQVDSEHIGQSVAVE
EQRAHKNDSTEHKKSDKKEPQYEPTNTAEDLDMDIVSVPSSVPEDIFENLETAMEVQSSA
EYQGDGNSGTEQELETSVKLNITSKDNRGGIKSKTTAKVTKELYVKLTPVSLSISPIKGA
DCQEVPQDKDSYKSSCLNPKPENCELGQEKNDNEHLAKSEVPLLSEESDLRRSPRVKTTP
LRRQTETNRTTSNSDEENNETVKEQQKLSVPMRKKDKRNSSDSAIDNPKPNKLPKSKQSE
IVDHISDSDEMLTILKDMPSMSHSSSDTDINEPHTNNKKTFYSEIQRGKDDKRKRKRKSS
TSGSDFDIKKGKSVKKAIISKKKRQNQSESSNYDSELEKEIKRMSKIGTARTTKKRVPNK
EYYDSSEDEKHSKQGMDNQGHKSLRTAQEGSSDDVERKQERENFSSAEGTVDKDKTIMEL
RDRLSKKQQPNVSSESADKLCSGKEESFNSPEDKKVTESKGKSKHQRTRMCQKILGGLCD
VAEKFSEKEQSDESSEDDNEQSKKEIEEKEKKTADLNKKVMEQEYESSSDTTEKLPEGEE
ICDFPKSIKQKSLADGEKKCKKIKDKASKKKGELSDNSEKLPGKRESCDSSEDKRSKNGT
SSREKKRFNLPEKSSRKRQDCSSSDTEKYSMKEDDCDFSDKRPKGIELRERKNLNSNRNS
KEVQSGSSSDVEESSEDNKNLKKQRASAKKKAGSIKEKMRNSLRTSTKRKQADITSSSSS
DIGDDDQKSVGEGSSDEQKIKPVTENLVLSSHTGFCQSSGDEALSKSVPVTVDDDDDDND
PENRIAKKMLLEEIKANLSSDEDGSSDESEEGKKRTGKHNEENPGDEEIKNQTISESDSD
SEESKKPRYRHRLLRHKLTLSDGESGEEKKMKPKEHKEAKSRNRRKVSSEDSEDSDFQES
GVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEDKE
EDEEEDEEEDENDDSKSPGKGRKKIRKILKDDKLRTETQNALKEEEERRKRIAERERERE
KLREVIEIEDASPTKCPITTKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCC
CESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWM
NEFEKWQEGLKDDEKLEVSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNV
KSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNL
IEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCV
QRKDYTALTKFLPPKHEYVLAVRMTPIQCKLYQYYLDHLTGVGNSSEGGRGKAGAKLFQD
FQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDEFIASDSDETSMSLSSDDYTKKKKAKG
KKGKKDSSSSGSGSDNDVEVIKVWNSRSRGGGEGNVDETGNNPSVSLKLEESKATSSSNP
SSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFL
ELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFI
ISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDK
IYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKKRDTPMLPKD
TILAELLQIHKEHIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKKGLTMRFNIPTG
TNLPPVSFNSQTPYIPFNLGALSAMSNQQLEDLINQGREKVVEATNSVTAVRIQPLEDII
SAVWKENMNLSEAQVQALALSRQASQELDVKRREAIYNDVLTKQQMLISCVQRILMNRRL
QQQYNQQQQQQMTYQQATLGHLMMPKPPNLIMNPSNYQQIDMRGMYQSVAGGMQPPPLQR
APPPMRSKNPGPSPGKSM
NT seq
7437 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagcccatgagcgaaagcaagttgaatacattggtgcagaagcttcatgac
tttctggcacactcatcagaggaatctgaagaaacaagttctcctccaagacttgtgatg
aaccaaagcacagataaagtcagtgggtctggcaataactctgatatgatggaaaacagc
agggaagagggagctagctctgcagaaaaatccaaatcgtcaggatcatcacgatcaaag
aggaaaccttcaattgtaacaaagtatgtagaatctgatgatgaaaaaactttggatgaa
actgtaaatgaagatgcttctaatgaaaattcagaaaatgatattactatgcaaagcttg
ccaaaaggtacagtgattgtacaaccagagccagtgctgaatgaagacaaagatgatttt
aaagggcctgaatttagaagcagaagtaaaatgaaaactgaaaatctcaaaaaacgcgga
gaagatgggcttcatgggattgtgagctgtacagcttgtggacaacaggtcaatcatttt
caaaaagattccatttatagacatccttcactgcaagtacttatttgtaagaattgcttt
aaatattacatgagtgatgatattagccgtgactcagatggaatggatgaacagtgtaga
tggtgtgcagaaggtggaaacttaatttgttgtgacttttgccataatgccttctgtaag
aagtgcattcttcgcaaccttggtcgaaaggagctgtctacaataatggatgaaaacaac
caatggtattgctacatttgtcacccagagcctttgttggacttggtcacggcgtgtaac
agcgtatttgaaaacttagaacagttgttgcaacaaaataagaagaagataaaagttgat
aatgaaaagactagtaaagtatatgagcatgcacccagattttctccaaagaaaaacagt
tcaaattgtaatggagaagaaaagaagttagatgattcatattctggttctgtgacctac
tcttattcagcactaattgtgcccaaggacatgattaagaaggcaaaaaaactgattgag
actactgccaacatgaattccagttacgttaaatttttgaagcaagcaacagataattca
gaaatcaattctgctacaaagttacgtcagcttaaggcttttaagtctgtgttggctgat
atcaagaaagctcatcttgcattagaagaagatttgaattcagagattcaagctttggat
gctataaacaaagagaaaaataccaaagagcataaagtcatagatgctaagtctgaaaca
aaagtaagaaaaggagaaaaaccttgtgttttggaaaggaaggatatttcaaaatcagaa
ggtaaactgtcaagaaagcaggtggatagtgagcatataggtcagagtgttgcagtagag
gaacaaagagcacataaaaatgacagtactgaacataagaaatctgataaaaaagaacct
cagtatgaacctactaacactgccgaagacttagacatggatattgtgtctgttccttcc
tcagttccagaagacatttttgaaaatcttgagactgctatggaagttcagagttcagca
gagtatcagggagatggcaacagtggaactgaacaagaactggagacttctgtaaaatta
aatattacttcaaaagacaacagaggaggtattaaatcaaaaacaacagctaaagtaaca
aaagaattatatgttaaactcacccctgtttccctttctatttccccaattaaaggtgct
gattgtcaggaagttccacaagataaagatagctataaaagttcttgtctgaaccctaag
ccagagaactgtgaacttggacaggaaaagaatgataatgagcatttggctaaaagtgaa
gttccgttactttcagaagaatctgatcttcgaagatccccgcgtgtaaagactacacct
ttgagacgacagacagaaaccaaccgtacaacatctaattcagatgaagaaaataatgaa
acagttaaggagcaacaaaaactttcggttccaatgagaaaaaaggataagcggaattct
tctgacagtgctatagataatcctaaacctaataaattgcctaaatctaagcagtcagag
attgtggatcacatttcagattctgatgaaatgctgacaatcctcaaagacatgcccagt
atgagtcacagttcttcagatactgatattaatgaacctcatacaaataacaagaagact
ttttattcagagattcaaagagggaaagatgataaaagaaaaaggaaacgaaaaagttct
acttctggctcagattttgatattaagaaaggtaaatcagttaaaaaggctataatttct
aaaaagaaacggcaaaaccagtctgaatcttctaattatgactcagaattagaaaaagag
ataaagagaatgagtaaaattgggactgccagaacaaccaaaaaaagagttccaaataaa
gaatattatgattcttctgaagatgaaaaacacagcaaacaaggaatggataatcaaggt
cataaaagtttgaggactgcacaggaaggatcatctgatgatgttgaaaggaaacaagag
agagagaatttctcttcagcagaaggcacagttgataaagacaagaccatcatggaattg
agagatcgcctctctaagaagcagcagcctaatgtttcctcagagagtgctgataagctt
tgttctgggaaagaggagagttttaattctccagaagataaaaaggttactgaatctaaa
ggaaagagcaagcaccagcgaaccagaatgtgtcagaaaatactgggtggcttatgtgat
gttgctgagaagttctcagagaaggaacagagtgatgaatcctctgaagatgataacgag
cagagcaaaaaagaaattgaagaaaaagaaaagaaaactgcagacttgaataaaaaagtg
atggaacaagagtatgaatcatcatctgatactactgagaaattacctgagggagaagaa
atttgtgactttcctaaaagcataaaacaaaagagcttagctgatggggaaaagaaatgc
aaaaaaataaaagataaagcttctaaaaagaagggtgaattatctgataattctgagaag
ttaccagggaaaagagaaagttgtgactcttcagaagataagaggagtaagaatggaaca
tccagtagagagaagaaaaggttcaacttgcctgaaaagagttcgaggaagagacaggat
tgttcatcatctgatactgaaaaatattccatgaaagaagatgattgtgatttttctgat
aagagaccaaaaggaatagaattaagggaaagaaagaatttaaattcaaatagaaatagc
aaggaagtacaaagtggctcatcttctgatgttgaggaaagttctgaagataataaaaac
ctgaagaaacaaagagcttcagctaaaaagaaggcaggcagtataaaggagaaaatgaga
aactccttgagaacaagcactaaaaggaagcaggctgacattacttcctcatcttcttct
gacataggagatgatgatcagaaatctgtaggtgaggggagcagtgatgagcagaaaatt
aagcctgtgactgaaaatttagtgctgtcgtcacatactggattttgtcaatcttcagga
gatgaagccttatctaaatcagtgcctgtcacagtggatgatgacgacgatgacaatgat
cctgaaaatagaattgccaagaagatgcttttagaagaaattaaagccaatctttcctcc
gatgaggatggatcttcagatgagtcagaagaagggaagaaaagaactggaaaacacaat
gaagaaaaccctggagatgaggaaataaaaaatcaaaccatttctgaatcagattcagat
tctgaagaatctaagaagccaagatacagacataggcttttgagacacaagctgactctg
agtgatggagaatctggagaagaaaaaaagatgaagcctaaagagcacaaagaagccaaa
agcagaaatagaaggaaggtgagtagtgaagattctgaagattctgattttcaggaatct
ggagttagtgaagaagttagtgaatctgaagatgaacaacggcccagaacaaggtctgcg
aagaaagcagagttggaagaaaatcagagaagttacaaacagaagaagaaaaggcgacgc
attaaagttcaagaagactcatccagtgaaaacaagagtaattctgaagaagataaagaa
gaagatgaagaagaagatgaagaagaagatgaaaatgatgattccaagtctcctggaaaa
ggcagaaagaaaattcggaagattcttaaagatgataagctaagaacagaaacacaaaat
gctcttaaggaagaagaagagaggcgaaaacgtattgctgagcgagagcgagagcgagag
aaattgagagaggtgatagaaattgaagatgcttcaccgactaagtgtccaataacaacg
aagttggttttagatgaagatgaagaaaccaaagaacctttagtgcaggttcatagaaat
atggttatcaaattgaaaccacatcaagtagatggtgttcaatttatgtgggattgctgc
tgtgagtctgtaaaaaaaacaaagaaatctccaggttcaggatgcattcttgcccactgc
atgggccttggtaagactttacaggtggtaagttttcttcatacagttcttttgtgtgac
aaattggatttcagcacagctttagtggtttgtcctcttaatactgctttgaattggatg
aatgaatttgagaagtggcaggagggattaaaagatgatgagaagcttgaggtctctgaa
ttagcaactgtgaaacgtcctcaagaaagaagctacatgctacagaggtggcaagaagat
ggtggtgttatgatcataggctatgagatgtacagaaatcttgctcaaggaaggaatgtg
aagagtaggaaacttaaagaaatatttaacaaagcattggttgatccaggacctgacttt
gttgtttgtgatgaaggccatattctaaaaaatgaagcatctgctgtttcaaaagctatg
aattctatacgatcaaggaggagaattattttaacgggaacaccacttcaaaataaccta
attgagtatcattgcatggttaactttatcaaagaaaatttgcttggatccattaaggaa
ttcaggaatcggtttataaatccaatccaaaatggtcagtgtgcagattctaccatggta
gatgtcagagtaatgaaaaaacgagctcacattctctatgaaatgttagctggatgtgtt
cagaggaaagattatacagcattaacaaagtttttgcctccaaagcatgagtatgtttta
gctgtgagaatgactcctattcagtgcaaactctatcagtactacttagatcacttaaca
ggtgtaggtaatagcagcgaaggtggaagaggaaaggcaggtgcaaaacttttccaagat
tttcaaatgttaagtagaatctggactcatccatggtgtttgcagctggactacattagt
aaagaaaataagggatattttgatgaagacagtatggatgaatttatagcttcagattcc
gatgaaacctccatgagtttaagctctgatgattatacaaaaaagaaaaaagcaaagggg
aaaaagggaaaaaaagatagtagctcaagtggaagtggcagtgacaatgatgttgaagtg
attaaagtctggaattcaagatctcgaggaggtggtgaaggaaatgtggatgaaacagga
aacaatccctcagtttctttaaaactggaagaaagtaaagctacttcctcttctaatcca
agcagtccagctccagactggtacaaagattttgttacagatgctgatgctgaggtttta
gagcattctggaaaaatggtacttctctttgaaattcttcgaatggcagaggaaattggg
gataaagtccttgttttcagccaatctctcatatctctggacttgattgaagattttctt
gaattggctagtagggaaaagacagaagataaagataagcctcttatttataaaggtgaa
gggaagtggctcagaaacattgactattaccgtttagatggctctacaactgctcagtca
aggaaaaaatgggctgaagaatttaatgatgaaactaatgtgagaggacgattatttatc
atttctaccaaagcaggatctcttggaattaatctggtagctgctaatcgagtgattata
tttgatgcttcttggaatccatcttatgacatccagagtatattcagagtttatcgcttt
ggacaaactaaacctgtctatgtatataggttcttagctcagggaaccatggaagataag
atttatgatcggcaagtaactaagcagtcactgtcttttcgagttgttgatcaacagcaa
gttgaacgtcattttaccatgaatgagctgactgaactttatacctttgagccagacttg
ttagacgaccctaattcagaaaagaagaagaaaagggatactcccatgctgccaaaggac
accatacttgcagaacttcttcaaatacataaagaacacattgtaggatatcatgaacat
gattctcttttggaccacaaagaagaagaagagttgactgaagaagaaagaaaagcagct
tgggctgaatatgaagcagagaagaagggactgaccatgcgtttcaacataccaactggg
accaatttaccccctgtcagttttaactctcaaactccttatattcctttcaatttggga
gccctatcagcaatgagtaatcaacagctggaggaccttattaatcaaggaagagaaaaa
gttgtggaagcaacaaacagtgtgacagcagtgaggattcagcctcttgaagatataatt
tcagctgtatggaaggaaaacatgaatctctcagaggcccaggtacaggcattagcatta
agtagacaagccagccaggagcttgatgtcaaacgaagagaggcaatctacaatgacgtg
ttgacaaaacaacagatgttaatcagctgtgttcagcgaatacttatgaaccgaaggctc
cagcaacagtacaatcagcagcagcagcagcaaatgacttatcaacaagcaacactgggt
cacctcatgatgccaaagcctccaaatttaatcatgaatccttctaactaccagcagatt
gatatgagaggaatgtatcagtcggtggctggtggtatgcagccaccaccattacaacgt
gcgccacccccaatgagaagcaaaaatccaggaccttccccagggaaatcaatgtga
DBGET
integrated database retrieval system
