Bubalus bubalis (water buffalo): 102401980
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Entry
102401980 CDS
T05912
Symbol
TNRC18
Name
(RefSeq) trinucleotide repeat-containing gene 18 protein isoform X7
Organism
bbub
Bubalus bubalis (water buffalo)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_TNRC18
BAHCC1-like_Tudor
BAH
Tudor_3
Motif
Other DBs
NCBI-GeneID:
102401980
NCBI-ProteinID:
XP_044791759
LinkDB
All DBs
Position
24:complement(3317282..3401732)
Genome browser
AA seq
2871 aa
AA seq
DB search
MDGRDFGPPRSVHGPPPPLLSGLAMDSHRVGAATAGRLPASGLPGPLPPGKYMAGLNLHP
HPDGFYLPAPGAPGAPGTLHSHAASSRTPGSHSSGTSTKGASREGPAKERTGRSGEPPPL
FGKKDPRAREEAAGPRGVVDLTQEARAEGRQDRGPPRLLERLSPFLAEPGPLRAPGSATA
ESKGKNPPPPLSLSLCNGTGTGDVGIPALVAEGARGTKDIARQDESARLRRAEALLPGPC
PCPSPLPPPPPPPSKGPPAPPAASGAFAAPQPAPTGVYTIFPAAAAREPGREHRVVAPTF
VPSVEAFDERPGPIQIASQARDSRAREREVGRPGVLQGPPGSPRPPPDRPENLREKSSVI
RSLKRPPPAEAPPARAARASPDPRAYLPAKELLKPEAEPRPCERALRGPAVTAASQQAAK
LFGLEPGRPPPPAGPEHKWKPFELGNFATTQMAVLAAQHHHASRAEEEAAAAASKKAYLD
PGGALPRAAATCARPGADIHAVAHGPGEASAMQSLIKYSGSFAREAVTVRPGGCGKKSPF
GGLGTMKPEPAPTAAPRAQTRLPHPGGPAASSGRQLKRDPERPESAKAFGREGSGAQGEA
EVRHPPVGIAVAVARQKDSGGSGRLAPGLADQERSLSLSNVKGHGRADEDCGDDRARHRE
ERLLGARLDRDQEKLLRESKELADLARLHPTSCAANGLNPNLMVTGGPALAGSGRWSADP
AAHLATHPWLPRSGSTSMWLAGHPYGLGPPSLHQGMTPAFPPGLGGSLPSAYQFVRDPQS
GQLVVIPSDHLPHFAELMERAAVPPLWPALYPPGRSSLHHAQQLQLFSQQHFLRQQEFLY
LQQQAAQALELQRSAQLVQERLKAQEQRAEMEEKVSKRSLEAAGKAGLGAAGPGLLPRKP
PGLSTGPTGTYGKAMSPPPSPRASPVAALKAKVIQKLEDVSKPPAYAYPATPSSHPSSPP
PASPPPTPGIARKEEAPENVVEKKDLELEKEAPSPFQALFSDIPARYPFQALPPHYGRPY
PFLLQPTAAADADGLAPDVPLPADGPERLALSPEDKPLRLSPSEAPEPLREVPDEEPLVE
REVKAEVEDMDEEPAQLPSLGSPLTLPPGDALAAPSPAGGLLEAQALSASGQGPEEPPRC
PDFAEGAEARVDSPGLTESCAAAPDLGPRLTPEPLVEAKEEPVEVPVDMPVAVPVPLAEV
VPGEEDLAQTAPSEPRPSLELPDCDVPAGEGECPSLEAPEAGPVPGGTCFLEEAGSEEFL
PSLEDPLAGMNALAAAAELPQARPLPSPGTGATALETLEAAQSLVLEQSFLHGITLLSEI
AELELEKRSQEAAGAERGPPVRPSLESLLAASSHVLKEVLDGPFVDPLKNLRLPRELNPN
KKYSWMQKKDERMYAMKSSLESMDAMELDFRMRLAEVQRQYKEKQRELVKLQRRRDSEDR
REEPHRSLARRGPGRPRKRTHALSALSPPRKRGKSRIHSGKLSSKPLLTSDDYELGAGMR
KRHKGPEEDHDALGGAGKARGRNQPWDEHETSSDFMSQLKIKKKKMASDQEQLASKLDKA
LSLTKQDKLKSPFKFSDGSGGKSKASGGCGRYLTPYDSLLGKDRKALAKGLSLSLKASRE
GKHKRAAKARKMEVGFKARGQPKSTHSPFASEVSSYSYNTDSEEEEEFLKDEWAAQGPSS
SKLTPSLLCGMVAKSSKPAGGPKLTRRGLAGARTLKPKPAAGRKQPFCLLLQEVEPRSSF
SDSSEDSFDQDESSEEEDEDDELEEDEAAGSYRLGARERALSPGLEESGLGLLARFAASA
LPSPTVGPSLSVVQLEAKQKARKKEERQSLMGTEFEYTDSESEVKVRKRSPAGLLRPKKG
LGEPGPALAAPGARAPGPSSPDKAKLAAEKGRKARKSRGPKEPGPEAGPEASDDDLWTRR
RSERIFLHDASAPPAPSSAAPTAAKPGRCAKAGLPSPRKDAGRARDRKDPRKKKKGKEAG
SGASLPPPRVPALPTEARAPHTSSPASAKRSKAKAKGKEVKKENRGKGGAVSKLMESMAA
EEDFEPNQDSSFSEDEHLPRGGAAERPLTPAPRSCIIDKDELKDGLRVLIPMDDKLLYAG
HVQTLHSPDIYRVVVEGERGNRPHIYCLEQLLQEAIIDVRPASTRYLPQGTRIAAYWSQQ
YRCLYPGTVVRGLLGLEDDGDLITVEFDDGDTGRIPLSHIRLLPPDYKIQCAEPSPALLV
PSAKRRSRKTSKDAGESKDGTAPASEEPGAKARGRGRKPSTKAKSDRAAVLEEGGSTDDV
PGTPLVLEPVSTPGSKKSPPEPVDKRAKTPKARPAPPQPSPAPSTFASCPAPEPFGELPA
PAAALAPAPLVTVPITMPATRPKPKKARAAEESASKGARRPGEEAELLVKLDHEGVTSPK
SKKAKEALLLREEPKGLLGLGSYAPAAGSPEPKAARPKAADGDLAQEPAVGLTFEDSGTP
KSPDKGQAEQDGAEESESGSSSGGSSSDSGSSSSETEAEEDGQGGGGRDCSAASSRASSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDDS
SCSSDDEAAPAPTAGPSAPPALPSKAPKQAGKARSSAHSPGKKAPAPAAQAPPPQPTPPL
PPKAQAGAKSRPKKREGVHLPTTKELAKRQRLPSVENRPKIAAFLPARQLWKWFGKPTQR
RGMKGKARKLFYKAIVRGKEMIRIGDCAVFLSAGRPNLPYIGRIQSMWESWGSNMVVRVK
WFYHPEETSPGKRLHEGQPWDQKSGRSLPASLRASSQRKDFMERALYQSSHVDENDVQTV
SHKCLVVGLEQYEQMLQTKKHQDSEGLYYLAGTYEPTTGMIFSTDGVPVLC
NT seq
8616 nt
NT seq
+upstream
nt +downstream
nt
atggatggccgagacttcgggcccccgcggtccgttcacggccccccgccgccgctgctg
tccggcctggccatggacagccaccgcgtgggcgcggccacggccggacgccttcccgct
tcaggcttgcccggcccgctgccgcccggaaagtacatggccggcctcaacctgcacccg
cacccggatggcttctacctgcccgccccgggggctccgggtgccccgggcaccctgcac
tctcatgcggcctcctccaggacccccggcagccactcctcgggcacctcgaccaaaggc
gcttctcgggaaggtccagccaaggagaggactggccgaagcggggagccacccccactg
ttcggcaagaaggacccgcgggcccgggaagaggcggctgggccgcgcggtgtggtggac
ctgacccaagaggcaagggcggaaggccgccaggaccgagggcccccacgcctcctcgag
cgcttgtcccctttcctggccgagccggggcccctgcgggcgccgggttcagccaccgcc
gagtcgaagggcaaaaacccgccgccgccactgtcgctgagcctctgcaacggtaccggc
accggggacgtggggatccccgcactagtagccgagggggcccgcggcaccaaggacatt
gcgcgccaggacgagagcgcgcggctgcggcgcgcagaggccctgctacccgggccctgc
ccgtgcccctcgccactcccgccgccgccaccgccgccaagcaagggtccgcctgcgccc
cctgccgcctccggggccttcgccgcgccgcagcccgcccccactggcgtctacaccatc
ttccctgcggcggccgcgcgggagccgggccgtgagcaccgcgtggtggcacccaccttc
gtgccttccgtggaggccttcgacgagcgcccggggcccatccagatcgcgtcgcaggcg
cgtgactcccgggcccgggagcgcgaggtgggccggcctggggtcctgcagggcccgccc
gggtctccgcggccacccccggaccggcctgagaacctccgcgagaagagctctgtgatc
cgctcgctcaagcggccgccgccagccgaggccccaccggcgcgggccgcacgcgcctcc
ccggacccccgggcctacctccccgccaaggagctgctcaagcccgaggctgagccccgg
ccctgcgagcgcgccctgcgtggccccgctgtcaccgccgcctcccagcaggccgccaag
cttttcggcctggagcctgggcggccgcccccgcccgccggccctgagcacaagtggaaa
cctttcgagctgggcaacttcgccaccacgcagatggccgtgctggccgcgcagcaccac
cacgccagccgcgccgaggaggaggccgccgccgccgcctccaagaaggcctacctggac
cccgggggtgcgctgccccgcgccgcggccacctgcgccaggccaggtgctgacatccat
gccgtggcccacgggcccggagaggcctccgccatgcagagcctcatcaagtacagtggc
agcttcgcccgcgaggccgtgactgtgcgcccaggcggctgcggcaagaagagccccttc
ggaggcctgggcaccatgaaacccgagccggcgcccacagctgccccgcgcgcccagacg
cgcctcccgcacccggggggccctgcagcatccagcggccgacagctgaagcgtgacccg
gagaggcctgagagtgccaaggccttcggccgcgagggctccggggcccagggtgaggcg
gaagtgcgacacccgcctgtgggcattgctgtggccgtggcccggcagaaggacagtggc
ggcagtggccggctggcacctgggctggcggaccaggagcggtccctgtcgctgagcaac
gtcaaagggcacggccgagctgacgaggactgtggcgatgaccgggccaggcatcgggag
gagaggctgctgggggcgcggctggaccgagaccaggagaagctgctcagagaaagcaag
gagctggcggacctggcccgcctgcaccccaccagctgtgctgctaacggcctgaacccc
aacctcatggtgactgggggcccggcgctggcgggctccggtcgctggtctgccgaccct
gcggcccacctggccactcacccctggctgccccgctcgggtagcacgtccatgtggctc
gccggacacccgtatggcttgggccccccttctctgcaccagggcatgacgcctgccttt
ccgcctggcctggggggctccctgccttcagcctaccagtttgtcagggacccccagtca
ggccagctggtggtcattcccagcgaccacctgcctcactttgcggagctgatggagcgg
gccgccgtgccgcccctctggcccgccctgtacccgccgggccgcagctctctgcaccac
gcccagcagctgcagctcttctcgcagcagcacttcctgcggcagcaggaattcctctac
ctgcagcagcaggcggcccaggccctggagctgcagaggagtgcccagctggtgcaggag
cggctgaaggcccaggaacagcgggccgagatggaggagaaggtgagcaagcgcagcctg
gaggccgcaggcaaggccggcctgggcgccgcgggcccggggctactaccgcggaagcca
cctggcctgagcaccggccccacgggtacctacggcaaagccatgagcccgccgccttct
ccccgcgcatcccctgtggctgccctgaaggccaaggtcattcagaagctggaggacgtg
tccaagcctcctgcctacgcgtaccccgccacgcccagctcccaccccagcagcccgccg
cccgcctccccaccacccaccccggggatcgcccgcaaggaggaggcccccgagaacgtc
gtggagaagaaggacttagagctggagaaggaagcccccagccccttccaggccttgttc
tcagatatcccagcccggtacccgtttcaagctctgccaccgcactatgggaggccctac
ccgttcctgctgcagcccacggcggctgccgacgccgacggcctggcccccgacgtgccg
ctcccagccgacgggcccgagcgcctagcgctctcccctgaggacaagcccctgcgcctg
tccccatccgaggccccagagccgctgcgcgaggtcccggatgaagagccgctggtggag
cgggaggtgaaggcggaggtggaggacatggacgaagagcccgcccagctgccctcactg
gggtccccgctgacgctgccccccggggacgccctggcggccccgagcccggcgggaggc
ctgctggaggcccaggcgctgagtgccagtggccaggggcctgaggagccccccaggtgc
ccggactttgctgagggagccgaggcgcgggtcgattcgccgggcctgacggagtcctgt
gcggccgccccggacttggggccgcggctgacgccggagccgctggtggaggccaaggag
gagccagtggaggtgcccgtggacatgcccgtggccgtgcctgtgcccttggcggaggtg
gtgcccggcgaggaggacctggcccagacggccccgagtgagccccgacccagcctggaa
ctgccggactgtgatgtgcccgctggggagggcgagtgcccaagcctagaggcccccgag
gccggccctgtgcccggcggcacctgcttcctggaggaggcaggctctgaggagttcctg
cccagcctggaggacccgctggccggcatgaacgccctggcggccgccgcagagctgccg
caggcccggcccctgccctccccaggcactggagccacggccctggagacgctggaggcc
gcgcagagcctcgtcctggagcagagcttcctgcacggcatcaccttgctaagcgagatc
gccgagctggagctggagaagaggagccaggaggcggcaggtgcagagcggggcccgccc
gtgcggccctcgctggagagcctcctggcggccagcagccacgtgctgaaggaggtgctg
gacggccccttcgtggatccgctcaagaacctgcggcttccacgagagctgaaccccaac
aagaagtacagctggatgcagaagaaggacgagcggatgtacgccatgaagtcctccctg
gagagcatggacgctatggagctggacttccggatgcggctggcggaggtgcagcgccag
tacaaggagaagcagcgtgagctggtgaagctgcagcggcgccgcgattccgaggacagg
cgcgaggaaccccatagaagcttggcacgcagaggccctggcaggccacggaaacggacc
cacgccctgagcgccctgtcgcccccccgcaagagagggaagagccgcatccatagcgga
aagctgagcagcaagcccctgctgacctcagacgactacgagctgggagcggggatgagg
aagagacacaaggggcctgaggaggaccacgacgccctcggcggagcagggaaagcccgg
gggaggaaccagccttgggacgagcacgaaacctcgtcagacttcatgagtcagctaaag
attaagaagaagaagatggctagcgaccaggagcagttggcaagcaagctagacaaagcc
ctctccctcacaaagcaggacaagttgaagtcgcccttcaagttctcagatggttctggg
ggaaaatcaaaagcgagcgggggctgtggcaggtacttgacgccctacgacagcctgctg
ggcaaggacaggaaggcgctggccaaaggcctcagcctgtctctgaaagcctcgcgagaa
ggtaaacacaaaagggccgccaaagccaggaagatggaggtggggttcaaggccagaggc
cagcccaagtcgacccactcccccttcgcctcggaagtgagcagttactcctacaatacg
gattcagaggaagaggaggaattcctgaaggacgagtgggctgcccagggcccctccagc
tccaaactgacaccttccctcctgtgcggcatggtggcgaagagtagcaagccagccggc
ggccccaagctgaccaggaggggcctggcgggcgcccggactctgaagcccaagccggcc
gccggcaggaagcagccgttttgtttgctgcttcaagaggtcgagccccgttcctccttc
agcgattcctcggaggactcgtttgaccaagatgagagctccgaggaggaggacgaggac
gatgagctggaggaggacgaggctgccggcagctataggctgggcgcccgggagcgggcc
ctgtcgccgggcctggaggagagcgggctgggcctgctggcacgctttgctgccagcgcc
ctgcccagccccaccgtggggccgtccctgtccgtggtgcagctggaggccaagcagaag
gcccgcaagaaggaggagcggcagagcttgatgggcacggagttcgagtacaccgactca
gagagcgaggtcaaggtgcggaagcggtcacccgccgggctgctgcggcccaagaagggg
ctgggggagccaggtccagccctggccgcgcctggtgcgcgcgcccctggccccagcagc
cccgacaaggccaagctggcggccgagaaggggcgcaaggcccgcaagtcgcggggcccc
aaggagccgggcccggaggcggggcccgaggccagcgacgacgacctgtggacgcggcgg
cgcagcgagcggatcttcctgcacgacgcctcggcgccccccgcgcccagcagtgccgcg
cccaccgccgccaagcctggccgctgtgccaaggccggcctgcccagcccgcgcaaggac
gccggccgcgccagggacaggaaggaccccaggaagaagaagaagggcaaggaggccgga
tctggagcctcgctaccaccgccccgcgttcctgccctgcccaccgaggcccgggcccct
cataccagctccccagcctctgccaagaggagcaaggccaaggccaagggcaaggaggtg
aagaaggagaaccggggcaagggaggagccgtgagcaagctgatggagagcatggctgct
gaggaggactttgagcccaaccaggactcgagcttctccgaggacgagcacctgccccga
ggcggggcggcagagcggccgctgaccccagctcctcgctcctgcatcattgacaaggat
gagctgaaggacggtctgcgtgtgctcatccccatggacgacaagctgctgtatgcgggg
catgtgcagaccctgcactcgccagacatatatcgagtggtggtggagggtgagcgtggg
aaccggccccacatctactgtctggagcagctgctgcaggaggcgatcatcgatgtgcgg
ccggcctccacgcgctacttgccgcaagggaccaggatcgcggcctactggagccagcag
taccgctgcctctaccctggcacggtggtccgaggcttgctgggcctggaagatgacggg
gacctcatcaccgtggagttcgacgatggggacaccgggaggatccccctctcgcacatc
cgcctcctgccgcccgactacaagatccagtgtgcggagccatctccggcactcctggtg
ccaagcgccaagcgccgcagccggaagaccagcaaagatgccggggagagcaaggatggg
accgcgccagcatccgaggagcccggcgctaaggctcggggtcgcgggcggaaacccagc
accaaagccaagagcgacagagctgccgtcctggaggaggggggctcgacagatgacgtc
cccggtaccccactggtcctggagcccgtcagcaccccaggttccaagaagagcccccca
gaacctgtggacaagcgggccaagacccccaaggctcgcccggcgcccccacagcccagc
ccagcaccatccacctttgccagctgcccggctcccgagcccttcggagagctgccagcc
cctgcggcggccctggcccccgcccccctcgtcaccgttcccatcaccatgcccgccacc
cgccccaagcccaagaaggcccgggctgccgaggagtcagccagcaagggcgcccggagg
ccaggggaggaggctgagctgctggtcaagctggaccacgagggcgtgacgtcgcccaag
agcaagaaggccaaggaggccctgcttctgcgggaggagcccaagggcctgctcggcctg
ggcagctatgcgccggcagccgggagccccgagcccaaggccgcccggcccaaggccgcg
gatggtgacctggcccaggagcctgcggtcgggctcacgttcgaggactctgggaccccc
aagagcccggacaagggccaggccgagcaggacggggctgaggagtcggagagcggcagc
agcagcggcggcagcagcagcgacagcggcagcagcagctccgagacggaggccgaggag
gacggccagggcggcggcgggcgggactgcagcgccgccagctccagggcctcgtcctcc
tcctcctcctcgtcctcctcgtcctcgtcctcctcctcgtcctcctcctcctcctcctcc
tcatcctcctcctcctcgtcttcatcttcctcctcctcctcctcctcatcttcatcctcc
tcctcctcatcttcgtcctcctcctcctcctcctcctcctcctccaccacagacgactcc
tcctgcagctcagatgacgaggccgcccctgcccccacggccggtccctccgccccgccg
gccctccccagcaaggcgcccaagcaggcgggcaaggcccgctcctcagcccactcccct
ggcaagaaggcgccggcgcctgcagcccaggctcccccgccacagcctacgccacctctg
ccgcccaaggcccaggccggggccaagagccggcctaagaagagagaaggtgtccacctc
cccaccaccaaggagctggccaagcggcagcgcctgccgtctgtggagaaccggcccaag
atcgccgctttcctgcccgcccggcagctctggaagtggttcggcaaacccacccagcgc
cgcggcatgaagggcaaggcccgcaagctcttctacaaggccatcgtgcgcggcaaggag
atgatccgcatcggggactgcgccgtcttcctgtcggccggccgtcccaacctgccctac
atcggccgcatccagagcatgtgggagtcgtggggcagcaacatggtggtccgcgtcaag
tggttctaccaccccgaggagaccagcccgggcaagcgcctccacgagggccagccctgg
gaccagaagtccggccgcagcctccccgcctccctgcgggcctccagccagaggaaggac
ttcatggagcgcgccctgtaccagtcctcgcatgtggacgagaacgacgtgcagacggtg
tcgcacaagtgcctggtggttggcctggagcagtacgagcagatgctccagaccaagaag
caccaggacagcgagggcctgtactacctggcgggcacctacgagcccaccacgggcatg
atcttctccaccgacggcgtgcccgtgctctgctga
DBGET
integrated database retrieval system
