Bubalus bubalis (water buffalo): 102402259 Help Entry 102402259         CDS       T05912                                  Symbol ACTN1 Name (RefSeq) alpha-actinin-1 isoform X1   KO K05699   actinin alpha 1/4 Organism bbub  Bubalus bubalis (water buffalo) Pathway bbub04510   Focal adhesion bbub04517   IgSF CAM signaling bbub04520   Adherens junction bbub04530   Tight junction bbub04670   Leukocyte transendothelial migration bbub04810   Regulation of actin cytoskeleton bbub05146   Amoebiasis bbub05203   Viral carcinogenesis bbub05322   Systemic lupus erythematosus Brite KEGG Orthology (KO) [BR:bbub00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     102402259 (ACTN1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     102402259 (ACTN1)    04520 Adherens junction     102402259 (ACTN1)    04530 Tight junction     102402259 (ACTN1)   09142 Cell motility    04810 Regulation of actin cytoskeleton     102402259 (ACTN1)  09150 Organismal Systems   09151 Immune system    04670 Leukocyte transendothelial migration     102402259 (ACTN1)  09160 Human Diseases   09161 Cancer: overview    05203 Viral carcinogenesis     102402259 (ACTN1)   09174 Infectious disease: parasitic    05146 Amoebiasis     102402259 (ACTN1)   09163 Immune disease    05322 Systemic lupus erythematosus     102402259 (ACTN1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:bbub04131]     102402259 (ACTN1)   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:bbub04812]     102402259 (ACTN1)    04147 Exosome [BR:bbub04147]     102402259 (ACTN1) Membrane trafficking [BR:bbub04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     102402259 (ACTN1) Cytoskeleton proteins [BR:bbub04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Cross-linking proteins      102402259 (ACTN1) Exosome [BR:bbub04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    102402259 (ACTN1)   Exosomal proteins of colorectal cancer cells    102402259 (ACTN1)   Exosomal proteins of bladder cancer cells    102402259 (ACTN1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Spectrin CH EFhand_Ca_insen EF-hand_8 EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_5 XisI U3_assoc_6 Uds1 Motif Other DBs NCBI-GeneID:  102402259 NCBI-ProteinID:  XP_025151084 LinkDB All DBs Position 11:22563974..22661765 Genome browser AA seq 914 aa AA seqDB search MDHYDSQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFR DGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNV KMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFC ALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMT YVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENR APENTMHAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGRM VSDINNAWGCLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHEAWTDGKEAMLRQK DYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKIC DQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHT IEEIQGLTTAHEQFKATLPDADKERLAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEI NGKWDHVRQLVPRRDQALTEEHARQQHNERLRKQFGAQANVIGPWIQTKMEEIGRISIEM HGTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQL LTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGY DIGNDPQKKTGMMDTDDFRACLISMGYNMGEAEFARIMSIVDPNRLGVVTFQAFIDFMSR ETADTDTADQVMASFKILAGDKNYITVDELRRELPPDQAEYCIARMAPYTGPDAVPGALD YMSFSTALYGESDL NT seq 2745 nt NT seq  +upstreamnt  +downstreamnt atggaccattatgattcccagcaaaccaatgactacatgcagcccgaagaggactgggat cgagacctgctcctggacccagcgtgggagaagcagcagagaaagacgtttacagcatgg tgcaactcccacctccggaaggcaggaacacagatcgagaacatcgaggaggacttccgg gacggcctgaagctgatgctgctgctggaggtcatctcaggtgaacgtttggccaagccc gagagaggcaaaatgagggtgcacaagatctccaatgtcaacaaggccttggacttcata gccagcaagggggtgaagctggtgtccataggagctgaagaaattgtggatgggaatgtg aaaatgaccctgggcatgatctggaccatcatcctccgctttgccatccaggacatctcc gtggaagagacttcagcgaaggaagggcttctcttgtggtgtcagagaaagacagcccct tacaagaatgtcaacatccagaacttccacataagctggaaggacggcctcggcttctgt gccttgatccaccgacaccggcccgagctgatcgactacgggaagctgcggaaggatgac ccactgacaaacttgaacacagctttcgatgtagcggagaagtacctggacattcccaag atgttggatgcggaagacatcgtcggaaccgcccgcccggacgagaaagccatcatgact tacgtgtccagcttctaccacgccttctctggagcccagaaggccgagacagcagccaat cgcatctgcaaggtgctggccgtcaaccaggagaacgagcagctcatggaggactacgag aagctggccagcgacctgctggaatggatccgccgcaccatcccatggctggagaaccgg gcacccgagaacaccatgcacgccatgcagcagaagctggaggacttccgggactaccgg cgcctgcacaagccgcccaaggtgcaggagaagtgccagctggagatcaacttcaacacg ctgcagaccaagctgcgcctcagcaaccggcccgccttcatgccctcagagggcaggatg gtctcggacatcaacaacgcctggggctgcctggagcaggcggagaagggctatgaggag tggctgctgaatgagatccggaggctggagcggctggaccacctggcagagaagttccga cagaaggcctccatccacgaggcctggacggacggcaaagaggccatgctgcggcagaag gattacgagacggctaccctctcagagatcaaggccctgctcaagaagcacgaggccttt gagagtgacctggctgcccaccaggaccgcgtggagcagattgccgccattgcccaggag ctcaatgagctggactattacgactcacccagtgtcaacgcccggtgccaaaagatctgt gaccagtgggacaatctaggggccctaacccagaagcgaagggaagctctggagcgcacg gagaaactgctggagaccattgaccaactgtacttggagtacgctaagcgggccgcaccc ttcaacaactggatggagggggccatggaggacctgcaggacaccttcattgtgcacacc atcgaggagatccagggactgaccacagcccatgagcagttcaaagccaccctccccgat gccgacaaggagcgcctggctatcctgggcatccacaacgaggtgtccaagattgtccag acctaccacgtcaacatggcaggcaccaacccctacacaaccatcacgcctcaggagatc aatggcaaatgggaccatgtgcggcagctggtgccacggagggaccaggccctaacggag gagcacgcccgccagcagcacaacgaaaggctacgcaagcagtttggggcccaggccaat gtcattgggccctggatccagaccaagatggaggagattggaaggatctccattgagatg cacgggaccctggaggaccagctcaaccacctgcggcaatacgagaagagcatcgtcaac tacaagcccaagatcgaccagctggagggcgaccaccagctgatccaggaggcgctcatc tttgacaacaagcacaccaactacaccatggagcacatccgtgtgggctgggagcagctc ctaaccaccatcgccaggaccatcaatgaggtggagaaccagatcctgaccagggatgcc aagggcatcagccaggagcagatgaatgagttccgggcctccttcaaccactttgaccgg gatcactccggcacgctgggtcccgaggagttcaaagcctgcctcatcagcttgggttat gatattggcaacgacccccagaagaagacaggcatgatggacacggatgatttccgcgcc tgccttatctccatgggttacaacatgggagaggcagagtttgcccgcatcatgagcatc gtggaccccaaccgccttggggtggtgacgttccaggccttcatcgactttatgtctcgc gagacagctgatacagatacagcagaccaagtcatggcttccttcaagatcctggccggg gataagaactacatcacggtggacgagctgcgcagagagctgcctcctgaccaggctgag tactgcatcgcgcgaatggccccctacaccggccccgacgccgtgcccggtgctctggac tacatgtccttctccacggcgctgtacggcgagagtgacctctaa

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