Bubalus bubalis (water buffalo): 102402268
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Entry
102402268 CDS
T05912
Symbol
GPC6
Name
(RefSeq) glypican-6 isoform X1
KO
K08112
glypican 6
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bbub00535
]
102402268 (GPC6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
bbub00537
]
102402268 (GPC6)
Proteoglycans [BR:
bbub00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
102402268 (GPC6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
bbub00537
]
Others
102402268 (GPC6)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glypican
DUF5856
Motif
Other DBs
NCBI-GeneID:
102402268
NCBI-ProteinID:
XP_006080398
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Position
13:complement(20921270..22173328)
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AA seq
555 aa
AA seq
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MPSWIGAVILPLSGLLLSLPARAEVKARSCGEVRQAYGAKGFSLADIPYQEIAGEHLRIC
PQEYTCCTTEMEDKLSQQSKLEFENLVEETSHFVRTTFVSRHKKFDEFFRELLENAEKSL
NDMFVRTYGMLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWARLLERMFQLINPQY
HFSEDYLECVSKYTDQLKPFGDVPRKLKIQITRAFIAARTFVQGLTVGREVANRVSKVSP
TPGCIRALMKMLYCAYCRGLPTVRPCNNYCLNVMKGCLANQADLDTEWNLFIDAMLLVAE
RLEGPFNIESVMDPIDVKISEAIMNMQENSMQVSAKVFQGCGQPKPAPALRSARSAPENF
NTRFRPYNPEERPTTAAGTSLDRLVTDIKEKLKLSKKVWSTLPYTICKDESVTAGTSNEE
ECWNGHSKARYLPEIMNDGLTNQINNPEVDVDITRPDTFIRQQIMALRVMTNKLKNAYNG
NDVNFQDTSDESSGSGSGSGCMDDVCPTEFEFVTTEAPAADPDRREVDSSAAQRGPSLLS
GSLVCVALALQRLCR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgccttcttggatcggggctgtgattcttcccctctccgggctgctgctgtccctcccg
gcccgggcggaggtgaaggctcggagctgcggcgaggtccgccaggcatacggtgccaag
ggattcagcctggcggacatcccctaccaggagatcgcaggagaacacttaagaatctgt
cctcaagagtacacgtgctgcaccacggaaatggaagacaagctcagtcaacagagcaaa
ctggagtttgaaaacctggtggaggagaccagccactttgtgcgcaccacgttcgtgtcc
aggcacaagaagtttgacgagtttttccgagagctcctggagaatgcagaaaagtcacta
aatgatatgtttgtacggacctatggaatgctgtacatgcagaattcggaagtgttccag
gacctctttacagagcttaagagatactacacggggggcaatgtgaatctggaggaaatg
ctcaatgacttctgggctcggctcctggaacggatgtttcagctgatcaacccccagtat
catttcagcgaggactacctggagtgcgtgagtaaatacacagaccagctgaagccgttt
ggagatgttccccggaagctgaaaattcagatcacccgcgccttcattgctgcgcggaca
tttgtccaagggctgaccgtgggcagagaagttgccaatcgggtgtccaaggtcagcccg
accccaggctgcatccgtgccctcatgaaaatgctatactgcgcttattgtcgaggactc
cccacggtgagaccatgcaacaactactgcctcaacgtcatgaagggctgcctggcaaat
caagccgatctcgacaccgagtggaacctctttatagatgccatgctcttggtggcagag
cgactggaaggaccattcaacattgagtcggtcatggacccaatagacgtcaagatctct
gaagccattatgaacatgcaggaaaacagcatgcaagtgtctgcaaaggtgtttcaggga
tgtggccaacccaaacctgctccagctctcagatctgctcgctcagctcctgaaaatttt
aatacacgattcaggccttacaatcctgaggaaagaccaaccactgctgcgggcacgagc
ttggaccggctggttacagacataaaagagaaactgaagctctctaaaaaggtctggtcg
acattgccctataccatctgcaaggatgagagcgtgacggcaggcacgtccaacgaagag
gaatgttggaatggacacagcaaagccaggtacctgcctgagatcatgaatgacgggctg
accaaccagatcaacaacccggaggtggacgtggacatcacgcggcccgacacgttcatc
aggcagcagatcatggctctccgcgtgatgaccaacaaattgaagaatgcgtacaatggc
aatgatgtcaacttccaggacacgagcgacgaatccagcggctcggggagtggcagtggg
tgcatggatgatgtgtgtcccacagagtttgagtttgtcaccacagaggcccccgcggcg
gatcccgaccggagagaagtagactcttctgccgcccagcgcggcccctccctgctctca
ggatctctcgtctgcgtcgccctggcactgcagagactgtgcagataa
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