Bubalus bubalis (water buffalo): 102402306
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Entry
102402306 CDS
T05912
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04517
IgSF CAM signaling
bbub04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102402306 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102402306 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bbub04812
]
102402306 (SPTBN1)
Cytoskeleton proteins [BR:
bbub04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102402306 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
102402306 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
102402306
NCBI-ProteinID:
XP_025116810
LinkDB
All DBs
Position
12:36665972..36877917
Genome browser
AA seq
2363 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIGIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVMRLLSKHRAFEDEMSGRSGHFEQAIKEGEDMIAEEHFGSEKIRERIA
YIREQWAHLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIANYRPTIDSLHEQASALPQEHAESPDVQGRLAGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQSLLSQSHAHQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDRIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTGLHKMWEVLESTTQTKAQRLFDAN
KAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQ
SQAQALSQEGKSTDEVDSKRLTVQTKFMELLEPLNERKQNLLASKEIHQFNRDVEDEILW
VGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITDSSLNAE
AIRQRLADLKQLWGLLIEETEKRHRRLEEAHRAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADSHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRPP
SPEPSTKVSEETESQQQWDTSKGEQVSQNGLPAEQGSPRMAETVDTSEMVNGAAEQRTSS
KESSPIPSPTSDRKAKTALPAQSAATLPARTQETPSAQMEGFLNRKHEWEAHNKKASSRS
WHNVYCVINNQEMGFYKDAKTAASGIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRLND
GNEYLFQAKDDEEMNTWIQAISSAISSDKHEVSASTQSTPASSRAQTLPTSVVTITSESS
PGKREKDKEKDKEKRFSLFGKKK
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacagtagccacagactacgacaacattgagatccagcagcagtacagcgat
gtcaacaaccgctgggacgtggacgactgggacaatgagaacagctctgcacggctcttt
gagcggtcgcgcatcaaggctctggcagatgaacgtgaagctgtgcaaaagaagaccttc
accaagtgggtcaactcccaccttgcccgggtgtcctgccggatcacagatctgtacact
gaccttcgggatggacggatgctcatcaagctactggaggtcctctctggagagagactg
cctaaacccaccaagggacgaatgcgcatccactgtctggagaatgtggacaaggccctt
cagttcctgaaggagcagagagtccatcttgagaacatggggtcccacgacatcgtggat
ggaaaccaccggctgaccctcggcctcatctggaccatcatcctgcgcttccagatccag
gatatcagtgtagaaactgaagacaacaaagagaagaaatctgccaaggatgctttgctc
ttgtggtgccagatgaagacagctgggtaccccaacgtcaacattcacaatttcaccacc
agctggagggatggcatggccttcaatgcactgatacacaaacaccggcctgacctgata
gattttgacaaactaaagaaatccaatgcacactacaatctgcagaacgcctttaacctg
gcagagcaacaccttggcctcactaaactcttggaccccgaagatatcagtgtggaccat
cccgatgagaagtctattatcacttacgtggtgacttactaccactacttctcaaagatg
aaggccttggctgttgaaggaaaacgaattggaaaggtgcttgacaacgctattgaaaca
gaaaaaatgatcgaaaagtatgagtcccttgcctctgaccttctggagtggattgaacaa
accatcattattttgaacaatcgcaaatttgccaactcactcgttggggtccagcagcag
cttcaggcgttcaacacttaccgcaccgtggagaagccccccaaatttactgagaagggc
aacttggaagtcctgcttttcaccattcagagcaagatgagggccaataaccagaaggtc
tacatgccccgggaggggaagctcatctctgacattaacaaggcctgggaaagactggaa
aaagcggaacatgagcgagaactggccctgcgaaacgagctcataagacaggagaaactg
gaacagctcgcccgcagattcgaccgcaaggcagctatgagagagacctggctgagcgag
aaccagcgtctggtgtcccaggacaactttggatttgaccttcctgctgttgaggccgcc
acgaaaaagcatgaggccattgagactgacatcgctgcgtacgaggagcgcgtgcaggct
gtggtggctgtggccagggaactggaggcagagaactaccatgacatcaagcgcatcaca
gcacggaaggacaatgtcatccggctctgggagtacctgctggaactgctcagggcccgg
agacaacgcctcgagatgaacctggggctgcagaagatattccaggaaatgctgtacatc
atggactggatggatgaaatgaaggtgctgttattgtctcaagactatggcaaacacttg
ctcggcgtggaagacctgttacagaagcatgccctggttgaagcagacattggcatccag
gcagagcgggtgagaggtgtcaacgcttctgcccagaagttcgcaaccgacggggaaggt
tacaagccctgcgacccccaggtaatccgagacagagtggcccacatggagttctgttac
caagaactttgccagctggcagctgagcgccgggcccgcctggaagagtcccgtcgcctc
tggaagttcttctgggagatggcagaggaggagggctggatccgggagaaggagaagatc
ctgtcctctgatgactatggcaaggacctcacaagcgtcatgcgcctgctcagcaagcac
cgggcattcgaagatgagatgagcggccgcagtggccacttcgagcaagccatcaaggag
ggcgaagacatgatcgccgaggagcacttcgggtcagagaagatccgggagcggattgcc
tacatccgcgagcagtgggcccacctggagcagctctcggccatccgcaagaagcgcctg
gaggaggcctcgctgctgcaccagttccaggcggatgccgacgacatcgacgcctggatg
ctggacatcctcaagatcgtctccagcaacgacgtgggccacgacgagtactccacccag
tccctggtcaagaagcacaaggacgtggcggaggagatcgccaactaccggcccaccatc
gactcgctgcacgagcaagccagcgccctgccccaggagcacgccgagtcccccgacgtg
cagggccggctggcgggcattgaggagcgctacaaggaggtggccgagctgacgcggctg
cggaagcaggcgctgcaggacactctggccctgtacaagatgttcagcgaggccgatgcc
tgtgagctctggattgacgagaaggagcagtggctcaacaacatgcagatcccagagaag
ctggaagacctggaggtcatccagcacagattcgagagcctcgaaccggagatgaacaac
caggcttcccgggtggcagtggtgaaccagattgctcggcagctgatgcatagcggccac
ccaagtgagaaggagatcaaagcccagcaggacaagctcaacacgaggtggagccagttc
agggagctggtggaccggaagaaggacgctctcctctccgccctgagcatccagaactac
caccttgagtgcaacgaaaccaagtcatggatccgggagaagaccaaagtcatcgaatcc
acccaggacctgggcaacgacctggcgggtgtcatggccctgcagcgcaagctgactggc
atggagcgggacctcgtggccatcgaggcaaaactgagtgacctgcagaaggaggccgag
aagctggagtccgagcaccccgaccaggcccaggctatcctgtctcggctggccgagatc
agtgacgtgtgggaggagatgaagaccacgctgaagaaccgtgaggcctccctgggagag
gccagcaagctgcagcagttcctgcgggacctggacgacttccagtcctggctctccagg
acacagacggccattgcctcggaggacatgcctaacaccctgaccgaggccgagaagctc
ctcacacagcacgagaacatcaaaaacgagatcgacaactacgaggaggactaccagaag
atgagggacatgggcgagatggttacccagggccagacagacgcccagtacatgttcctg
cggcagcggctgcaggccctggacacaggctggaacgagctccacaagatgtgggagaac
aggcagagcctcctctcccagtcccatgctcaccagcagttcctgcgggacaccaagcag
gccgaagccttcctgaacaaccaggagtatgttttggcccatactgaaatgcccaccacc
ttggaaggagctgaagcagctattaaaaaacaagaggatttcatgactaccatggatgcc
aatgaggagaaaatcaacgcggttgtggaaacgggccggaggctggtgagcgatgggaac
atcaactcggatcgcatccaggagaaggtggactccatcgatgacagacacaggaagaat
cgcgaggcagccagtgagcttctgatgagactgaaggacaacagggatcttcagaaattc
ctgcaagactgtcaggagttgtctctctggatcaatgaaaagatgcttacagcccaggac
atgtcttacgatgaagccagaaatctgcacagtaaatggttgaagcatcaagcctttatg
gcagaactcgcttccaacaaagaatggcttgacaaaattgagaaggagggaatgcagctc
atttcagaaaagccagagacagaagctgtggtgaaggaaaaactcacaggtttacataaa
atgtgggaagtccttgaatccaccacacagaccaaggcccagcggctcttcgatgcgaac
aaagccgaactcttcacccagagctgtgcagatctggacaaatggctgcatggcctggag
agtcagattcagtctgacgactatggcaaagacctcaccagcgtcaacatccttctgaaa
aagcagcagatgcttgagaatcagatggaggtgcggaagaaggagatagaagagctccag
agccaggcgcaggccctgagccaggaggggaagagcacggacgaggtggacagcaagcgc
ctcactgtgcagaccaagttcatggagctgctggagcccctcaacgagaggaagcagaac
ctgctggcctccaaggagatccatcagttcaaccgggacgtggaggacgagatcttgtgg
gttggagagaggatgcctttggcgacctccacagatcacggccacaacctccagactgtg
cagctgttaataaagaaaaatcagaccctccagaaggagatccaggggcaccagcctcgc
atcgacgacatctttgagaggagccagaacatcatcaccgacagcagcctcaacgccgag
gccatccggcagagactggccgacctgaagcagctgtggggcctcctcatcgaggagact
gagaagcggcaccggcggctggaggaggcgcacagggcccagcagtactacttcgacgcg
gccgaggctgaggcatggatgagcgagcaggagctgtacatgatgtccgaggagaaggcc
aaggatgagcagagcgccgtctccatgttgaagaagcaccagattctggaacaagctgtg
gaggactacgcagagacggtgcaccagctctccaagaccagccgggccctggtggccgac
agccatcctgaaagtgaacgtatcagtatgcggcagtccaaggtggacaagctgtatgca
ggcctcaaggacctggccgaagagaggcggggcaagctggacgagagacaccggctgttc
cagctcaaccgcgaggtggacgacctggagcagtggatcgccgagagggaggtggtcgcg
gggtctcacgagctgggccaggactatgagcacgtcacgatgctccaagagcgattccga
gagttcgcccgggacacggggaacattgggcaggaacgcgtggacacagtcaaccacatg
gcagacgagctcatcaactccggacattcagatgccgctactatcgccgagtggaaggat
gggctcaacgaggcctgggccgacctcctggagctcattgacaccagaacacagatcctc
gctgcctcctatgaattgcacaagttttaccacgacgccaaggagatctttgggcgcatc
caggacaaacacaagaaactccccgaggagctcgggagagatcagaacacagtggagacg
ttacagagaatgcacaccacctttgagcacgacatccaggccctgggcacccaggtgcgg
cagctgcaggaagatgcggcccgcctccaggcagcctacgcgggcgacaaggccgacgac
atccaaaaacgggagaacgaggtgctggaagcctggaaggccctgctagacgcctgcgaa
ggccgcagggtgcggctggtggacacgggagacaagttccgcttcttcagcatggtgcgc
gacctcatgctgtggatggaggatgtcatccggcagatcgaagcccaggagaagccccgg
gatgtgtcatctgttgaactattgatgaataatcatcaaggtatcaaagctgaaattgac
gctcgtaatgacagttttacgacctgcattgaactggggaaatccctgctggcaaggaag
cactacgcatctgaggagatcaaggagaagttactgcagttgacagaaaaaagaaaagaa
atgattgacaagtgggaagaccgatgggagtggttaagactgatcttagaggtccatcag
ttctcaagggatgccagtgtggccgaggcctggctgctcggacaggagccctacctgtcc
agccgagagataggccagagcgtggacgaggttgagaagctcatcaagcgccatgaggct
tttgaaaagtctgcagcgacctgggacgagaggttctctgccctggaaagactgacgacg
ttggagctactggaagtgcgcagacagcaagaggaagaggagaggaagaggcggccgccc
tcccccgagccgagcacgaaagtttccgaggagactgagtcccagcagcagtgggatact
tcaaaaggagagcaagtttcccaaaatggtttgccggctgaacagggatctccacggatg
gcagaaacagtggacaccagcgaaatggtcaacggcgctgcagaacagaggacgagctcg
aaagagtccagccctatcccctcccccacctctgatcgcaaagccaagactgctctccca
gcccagagtgccgccaccttgccagccaggacccaggagacaccttcggcccagatggaa
ggcttcctgaaccggaagcacgagtgggaggcccacaataagaaggcctcgagcaggtcc
tggcacaatgtttattgtgtcataaataaccaagaaatgggtttctacaaagacgcaaag
acagctgcttcaggaattccctaccacagcgaggtccctgtgagtttgaaagaagccatc
tgtgaagtggcccttgattacaagaagaagaagcacgtgttcaagctcagactaaatgat
ggcaatgagtacctcttccaagccaaagatgatgaggaaatgaacacatggatccaggcc
atctcctctgccatctcctctgataaacacgaggtgtccgccagcacccagagcacgcca
gcatccagccgggctcagaccctgcccaccagcgtcgtcaccatcaccagcgagtccagt
cccggcaaacgggagaaggacaaagagaaagacaaagaaaagaggttcagcctttttggc
aaaaagaagtga
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integrated database retrieval system
