Bubalus bubalis (water buffalo): 102402428
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Entry
102402428 CDS
T05912
Name
(RefSeq) nuclear RNA export factor 2
KO
K14284
nuclear RNA export factor
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03008
Ribosome biogenesis in eukaryotes
bbub03013
Nucleocytoplasmic transport
bbub03015
mRNA surveillance pathway
bbub05014
Amyotrophic lateral sclerosis
bbub05164
Influenza A
bbub05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102402428
03015 mRNA surveillance pathway
102402428
03008 Ribosome biogenesis in eukaryotes
102402428
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
102402428
05168 Herpes simplex virus 1 infection
102402428
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102402428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102402428
03009 Ribosome biogenesis [BR:
bbub03009
]
102402428
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102402428
mRNA cycle factors
Stress granule specific factors
102402428
Ribosome biogenesis [BR:
bbub03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
102402428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_8
LRR_4
LRR_Zer-1
Zn_ribbon_HMPTM
UBA_8
Motif
Other DBs
NCBI-GeneID:
102402428
NCBI-ProteinID:
XP_025131982
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All DBs
Position
X:complement(92792269..92811743)
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AA seq
634 aa
AA seq
DB search
MSERQHQQKNTHRTKNNRTYKNEEYRGGDSSPEGRNKGWSSFQDDFDKRSPRYEDNGYET
QPSHHCDDDGSMVMRNVHEGPKKRHFPYSFRGNGRRVRWRREGSISVTVWGKGKPVMKEM
RENTQDGAQGSWFKVTIPHGKKYDKIWLMNSIQSLCSVCFTPVDFHYVKNGAQFFVQKAS
TASALMDVSYKIYDEENQKIPIFVNPSAVPYSVRNKLGPEKMEMLKLAFNKRFDVSQQSL
DLQRLRFDPNLMGHDIEIILNRRNCMAAALQIIKKNFPELLSLNLSCNKLYHLDGLSDIV
HMVPTIKILNLSNNELNSMWELNKMKGLKLEELWLRGNPLCDRFPDQSTYLSAIIECFPK
LLRLDGQELPSTVVTDSHTPCATKPSKENNKETDTLKNVILQFLKQYYSIYDSGNRYGLL
SAYHHNACFSLTIPFHSEDPALSSLCPYFKDSRNMKKVKDPNLRVQQLKHTNNDIVRALC
VLPQTQHDFSSFLVDMWFWTGTMLCFSVNGVFKEVEGGSQECVRAFTRTFIITPTSSSSL
CIVNDELFVMEAGPKNTQSAFSIPEPTPSTSSVAALSEEQQQMVQAFSAQSGMNCQWSQK
CLQDNEWNYTRAGQVFCMFKTEGKIPEEAFKEIP
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagagacagcaccaacaaaaaaatactcatcgaacaaagaacaataggacatac
aaaaatgaagaatacagaggtggtgatagttcacctgaaggaagaaataaaggttggagt
tctttccaagatgattttgacaagaggagccctcgttatgaagataatggatatgagact
cagccttcacaccactgtgatgatgatggaagtatggtgatgaggaatgtccatgagggc
cccaaaaaaagacactttccctattccttccgaggcaacgggaggagagtgagatggcgc
agagaaggcagtatctctgttactgtgtggggaaaaggaaaacctgtgatgaaagaaatg
agggagaacacacaagatggtgcccaagggagctggtttaaggtcacaattcctcatggg
aaaaagtatgacaagatatggctaatgaactcaatccagagtctttgcagtgtctgcttt
actccagtggatttccactatgtgaaaaatggggctcaattctttgtccagaaagctagc
actgcctctgccttgatggatgtaagctacaagatctatgatgaggagaaccaaaagata
cctatctttgtcaacccctctgctgttccctactctgtgcgtaataagttgggaccagaa
aaaatggagatgttaaagctggcctttaacaaacgatttgatgtctcccagcaatctctt
gacctccagaggctccgctttgacccaaacttgatgggccatgatattgagataattctg
aatcgaagaaactgcatggctgctgccctgcagatcatcaagaagaacttccctgagcta
ttgtccttgaacctgagctgcaacaaactgtaccacctggacggcctgtctgacattgtg
cacatggtccccacaatcaagatactgaacctctccaacaatgagctgaactctatgtgg
gagttgaacaagatgaaggggctgaagcttgaagagctgtggctgcgagggaacccactg
tgtgacagatttccagaccagtccacctacttaagtgccatcatagaatgtttcccaaag
ttactgcgcctggatggccaggagttaccctcaacagttgtcactgacagtcacactccc
tgtgcaacaaagcccagcaaggaaaacaataaagaaactgacacactgaagaatgtgatc
cttcaattcctgaagcaatattactcgatctatgactctggaaacagatatggcctcctc
agtgcttaccaccacaatgcctgcttctccctgaccattccattccactctgaggatcca
gccctaagcagcttatgcccgtacttcaaggacagcaggaatatgaagaaggtcaaggac
cccaacctgcgtgtccagcagctgaagcacacaaataatgacattgtgcgtgccctctgt
gtgttgccccaaactcagcatgacttcagctccttcctggtggacatgtggttctggaca
ggtacgatgctctgcttctctgtcaatggggtgttcaaggaagtggaaggagggtctcag
gagtgtgtgcgtgccttcacccggaccttcatcattacccctaccagctcttcaagtctt
tgtatagtgaatgacgagctatttgtgatggaagccgggcctaaaaacacccagagtgca
ttctccatcccagagcccacaccgtccaccagctccgtggccgctttgtccgaggaacag
cagcaaatggtacaagccttctccgctcagtctgggatgaactgtcagtggtctcagaag
tgtcttcaggacaatgaatggaactacaccagagctggtcaagtcttctgtatgttcaag
actgagggcaagatcccagaggaagccttcaaagaaatcccctaa
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