KEGG   Bubalus bubalis (water buffalo): 102402428
Entry
102402428         CDS       T05912                                 
Name
(RefSeq) nuclear RNA export factor 2
  KO
K14284  nuclear RNA export factor
Organism
bbub  Bubalus bubalis (water buffalo)
Pathway
bbub03008  Ribosome biogenesis in eukaryotes
bbub03013  Nucleocytoplasmic transport
bbub03015  mRNA surveillance pathway
bbub05014  Amyotrophic lateral sclerosis
bbub05164  Influenza A
bbub05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:bbub00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102402428
   03015 mRNA surveillance pathway
    102402428
   03008 Ribosome biogenesis in eukaryotes
    102402428
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    102402428
   05168 Herpes simplex virus 1 infection
    102402428
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    102402428
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bbub03019]
    102402428
   03009 Ribosome biogenesis [BR:bbub03009]
    102402428
Messenger RNA biogenesis [BR:bbub03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102402428
   mRNA cycle factors
    Stress granule specific factors
     102402428
Ribosome biogenesis [BR:bbub03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    102402428
SSDB
Motif
Pfam: LRR_NXF1-5 NXF_NTF2 Tap-RNA_bind TAP_C NTF2 LRR_8 LRR_4 LRR_Zer-1 Zn_ribbon_HMPTM UBA_8
Other DBs
NCBI-GeneID: 102402428
NCBI-ProteinID: XP_025131982
LinkDB
Position
X:complement(92792269..92811743)
AA seq 634 aa
MSERQHQQKNTHRTKNNRTYKNEEYRGGDSSPEGRNKGWSSFQDDFDKRSPRYEDNGYET
QPSHHCDDDGSMVMRNVHEGPKKRHFPYSFRGNGRRVRWRREGSISVTVWGKGKPVMKEM
RENTQDGAQGSWFKVTIPHGKKYDKIWLMNSIQSLCSVCFTPVDFHYVKNGAQFFVQKAS
TASALMDVSYKIYDEENQKIPIFVNPSAVPYSVRNKLGPEKMEMLKLAFNKRFDVSQQSL
DLQRLRFDPNLMGHDIEIILNRRNCMAAALQIIKKNFPELLSLNLSCNKLYHLDGLSDIV
HMVPTIKILNLSNNELNSMWELNKMKGLKLEELWLRGNPLCDRFPDQSTYLSAIIECFPK
LLRLDGQELPSTVVTDSHTPCATKPSKENNKETDTLKNVILQFLKQYYSIYDSGNRYGLL
SAYHHNACFSLTIPFHSEDPALSSLCPYFKDSRNMKKVKDPNLRVQQLKHTNNDIVRALC
VLPQTQHDFSSFLVDMWFWTGTMLCFSVNGVFKEVEGGSQECVRAFTRTFIITPTSSSSL
CIVNDELFVMEAGPKNTQSAFSIPEPTPSTSSVAALSEEQQQMVQAFSAQSGMNCQWSQK
CLQDNEWNYTRAGQVFCMFKTEGKIPEEAFKEIP
NT seq 1905 nt   +upstreamnt  +downstreamnt
atgtctgagagacagcaccaacaaaaaaatactcatcgaacaaagaacaataggacatac
aaaaatgaagaatacagaggtggtgatagttcacctgaaggaagaaataaaggttggagt
tctttccaagatgattttgacaagaggagccctcgttatgaagataatggatatgagact
cagccttcacaccactgtgatgatgatggaagtatggtgatgaggaatgtccatgagggc
cccaaaaaaagacactttccctattccttccgaggcaacgggaggagagtgagatggcgc
agagaaggcagtatctctgttactgtgtggggaaaaggaaaacctgtgatgaaagaaatg
agggagaacacacaagatggtgcccaagggagctggtttaaggtcacaattcctcatggg
aaaaagtatgacaagatatggctaatgaactcaatccagagtctttgcagtgtctgcttt
actccagtggatttccactatgtgaaaaatggggctcaattctttgtccagaaagctagc
actgcctctgccttgatggatgtaagctacaagatctatgatgaggagaaccaaaagata
cctatctttgtcaacccctctgctgttccctactctgtgcgtaataagttgggaccagaa
aaaatggagatgttaaagctggcctttaacaaacgatttgatgtctcccagcaatctctt
gacctccagaggctccgctttgacccaaacttgatgggccatgatattgagataattctg
aatcgaagaaactgcatggctgctgccctgcagatcatcaagaagaacttccctgagcta
ttgtccttgaacctgagctgcaacaaactgtaccacctggacggcctgtctgacattgtg
cacatggtccccacaatcaagatactgaacctctccaacaatgagctgaactctatgtgg
gagttgaacaagatgaaggggctgaagcttgaagagctgtggctgcgagggaacccactg
tgtgacagatttccagaccagtccacctacttaagtgccatcatagaatgtttcccaaag
ttactgcgcctggatggccaggagttaccctcaacagttgtcactgacagtcacactccc
tgtgcaacaaagcccagcaaggaaaacaataaagaaactgacacactgaagaatgtgatc
cttcaattcctgaagcaatattactcgatctatgactctggaaacagatatggcctcctc
agtgcttaccaccacaatgcctgcttctccctgaccattccattccactctgaggatcca
gccctaagcagcttatgcccgtacttcaaggacagcaggaatatgaagaaggtcaaggac
cccaacctgcgtgtccagcagctgaagcacacaaataatgacattgtgcgtgccctctgt
gtgttgccccaaactcagcatgacttcagctccttcctggtggacatgtggttctggaca
ggtacgatgctctgcttctctgtcaatggggtgttcaaggaagtggaaggagggtctcag
gagtgtgtgcgtgccttcacccggaccttcatcattacccctaccagctcttcaagtctt
tgtatagtgaatgacgagctatttgtgatggaagccgggcctaaaaacacccagagtgca
ttctccatcccagagcccacaccgtccaccagctccgtggccgctttgtccgaggaacag
cagcaaatggtacaagccttctccgctcagtctgggatgaactgtcagtggtctcagaag
tgtcttcaggacaatgaatggaactacaccagagctggtcaagtcttctgtatgttcaag
actgagggcaagatcccagaggaagccttcaaagaaatcccctaa

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