Bubalus bubalis (water buffalo): 102402785
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Entry
102402785 CDS
T05912
Symbol
SDC4
Name
(RefSeq) syndecan-4
KO
K16338
syndecan 4
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04512
ECM-receptor interaction
bbub04514
Cell adhesion molecule (CAM) interaction
bbub04820
Cytoskeleton in muscle cells
bbub05205
Proteoglycans in cancer
bbub05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102402785 (SDC4)
04514 Cell adhesion molecule (CAM) interaction
102402785 (SDC4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102402785 (SDC4)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
102402785 (SDC4)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
102402785 (SDC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bbub00535
]
102402785 (SDC4)
Proteoglycans [BR:
bbub00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
102402785 (SDC4)
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Gene cluster
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Motif
Pfam:
Syndecan
DUF8063
Ycf70
Motif
Other DBs
NCBI-GeneID:
102402785
NCBI-ProteinID:
XP_006077692
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Position
14:9912878..9934301
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AA seq
199 aa
AA seq
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MAPARLLALLLLLVGVPAAAAESIRETEVIDPQDLLESRYFSGDLPDDEDVGGPGQESDD
FELSGSGDLDDSEDIRIFPEVMHPLVPIDNHIPEKTGSGVPTEPKELEENEVIPKRSSPF
DGDEDVSNKVSMSSTAQGSNIFERTEVLAALVVGGVVGILFAVFLVLLLVYRMKKKDEGS
YDLGKKPIYKKAPTNEFYA
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggcccccgcccgcctgctcgcgctgctgctgctcctcgtgggcgtccccgccgccgcc
gccgagtcgatccgagaaactgaggtcatcgaccctcaagacctcctagaaagccgatac
ttttccggagacttaccagatgacgaagacgtcggggggcccgggcaggaatccgatgac
tttgagctgtctggttctggagatctagatgactcagaggacatccggatcttcccagaa
gtgatgcaccccttggtccccatagataaccacatccctgagaagacagggagcggagtt
cccactgaacccaaggaactggaggagaatgaagttatccccaagaggtcgtcccctttt
gatggggacgaggatgtgtccaacaaggtgtccatgtctagcacagcccagggcagcaac
atctttgagaggacagaggtgctggcagctctggtcgtgggcggtgtcgtgggcatcctg
ttcgccgtcttcctcgtgctgctgctggtgtaccgcatgaagaagaaggatgagggcagc
tatgacctgggcaagaaacccatctacaaaaaagcccccaccaatgagttctacgcctga
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