Bubalus bubalis (water buffalo): 102402827
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Entry
102402827 CDS
T05912
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04110
Cell cycle
bbub04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102402827 (SMC1B)
04114 Oocyte meiosis
102402827 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbub03036
]
102402827 (SMC1B)
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
102402827 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
102402827 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
Ca_chan_IQ
Motif
Other DBs
NCBI-GeneID:
102402827
NCBI-ProteinID:
XP_006063341
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All DBs
Position
4:4129392..4212027
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AA seq
1235 aa
AA seq
DB search
MSRLEVLFVENFKSWRGRQVIGPFKRFTCIIGPNGSGKSNVMDALSFVMGEKIANLRVKN
IQELIHGAHIGKPVSSSASVKIVYLEESGEEKTFARTIRGGCSEYRFNDNPMSRSAYITE
LEKIGIIVKARNCLVFQGTVESISMKKPKERTQFFEEISSSGELIGEYEEKKRKLQKAEE
DAQFNFNKKKNVAAERKQAKLEKEEADRYQNLLEELKINKIQLQLFRLYHNEKKINFLYT
ELERVNKNLSVTRESLSHHESIVKAKKKEHGMLSRQLQQTQKELKSLEALLNQKRPQYIK
AKENTSHHLKKLDMAKKSIKDSEKQCSKQEDDIKALETELADLDGAWRSFEKQIEEEMLH
KGREIELEAGQLVQYKELKEQVRKKVAIMTQQLEKLQWEQRSDEERWAFEKRRHGEVQEN
IKQIKEQIEDHKKRIEKLEEYTKTCTNCLKEKKEQEENLVNEIEKTKSRMSEVNEELNLI
RSELQSAGIDTHEGKRQQKRAEILEHLKRLYPDSVFGRLLDLCHPIHKKYQLAVTKLFGR
YMVAIVVASEKVAKDCIRFLKEERAEPETFLALDYLDIKPINERLREIKGCKMMIDVIKT
QFPQLKKVIQFVCGNGLVCETLEEARHIAFAGPERRKTVALDGTLFLKSGVISGGSSDLK
SKARCWDEKELKNLRDRRTQLIQELKDLMKVVRKEADLKQIQALIQGTTTRLKYAQSELE
IIKKKHLAAFYREQSQLQSELLNIESQCAMLSEGIKERQQRIKEFQRKIDKVEDDIFQHF
CEEIGVENIREFENKHIKQQQEADQKRLEFEKQKTRLNIQLEYSRNHLKKKLNKINTLKE
TIEKGREDTDHLKKVEKNCLKIVDELMEKQQQLKDEFFTQNTNVEKVQAQIEEERKKFLA
IDREVGKWQKEVVILQSSLEQNRLEKHNMLLDCKVQDIEIVLLLGSLDDIIEVELGTEAE
GTQATTDIYEKEAAIEVDYSSLREDLKALQSDKEIEDQLRLLLQQVASQEDILLKTAAPN
LRAVENLKTVRDKFQESIDAFEASRKEARICRQEFEHVKKRRYDLFNQCFEHISISIDQI
YKKLCRNNSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAV
HSFRPAPFFVLDEVDAALDNTNIGKVSSYIKEQTREQFQMIIISLKEEFYSKADALIGIY
PEHDDCMFSRVLTLDLSQYPDTEGRESGRRQRKPH
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtttggaagtgctgtttgtggagaactttaagtcgtggcggggccgccaggtc
ataggccccttcaagaggttcacctgcatcatcggccccaacggctccgggaaatctaat
gtaatggatgcacttagttttgtaatgggagaaaaaatagctaatttaagagtgaaaaat
attcaagaactcattcatggagcacacattggaaaacctgtttcttcttctgcaagtgtg
aaaattgtatatttggaagaaagtggagaagagaagacatttgcaaggactatacgagga
ggatgctcagaatatcgttttaatgataatcctatgagtcgttctgcttatatcacagag
ctggaaaagataggcataatagtcaaagcacggaactgtttagtttttcagggaactgtg
gagtcaatttcaatgaaaaaacccaaagaaagaacccagttttttgaggaaatcagcagt
tcaggagagcttataggagaatatgaggaaaagaaaagaaagttacagaaagccgaagaa
gatgcacaatttaattttaataagaaaaaaaatgtagctgcagagcgcaaacaagcaaaa
ttagagaaagaagaggcagaccgttaccagaatctccttgaagaactgaaaattaacaag
atacaactgcagcttttccgactgtatcacaatgagaaaaaaattaattttttatacact
gagttagagcgtgtgaataagaatttgagtgtcacaagagagtctctttctcatcatgaa
agcatagttaaagccaagaaaaaggaacatggaatgttgagcagacaactacaacaaaca
caaaaagaattaaaatctcttgaagcactgttaaatcagaagaggcctcaatacattaaa
gctaaagaaaacacttctcaccacctcaagaaattagatatggctaaaaaatcaataaag
gacagtgaaaaacaatgttctaaacaggaagatgacataaaagccttagagacagagctg
gctgatttagatggtgcatggagaagttttgaaaagcagattgaggaagaaatgttacat
aaagggcgagagattgaactagaagctggtcagctggttcaatataaagaacttaaggaa
caggtaagaaagaaagtggctataatgacccaacagttggaaaagctgcagtgggaacag
aggtctgatgaagaaagatgggcatttgaaaagaggagacatggagaagttcaggaaaat
ataaaacaaattaaggaacaaatagaagatcataaaaagcgaatagagaagttggaggag
tatacaaaaacatgcacgaattgcttgaaagaaaaaaaagagcaagaggaaaacttagtg
aatgaaatagaaaaaacaaaatcaagaatgtctgaagttaatgaagagttgaatcttatt
agaagtgaattgcagagtgctggaattgatacccatgaaggaaaacgtcagcaaaagaga
gcagagattctagaacaccttaagagactttacccagattcagtgtttggaagactactt
gacctgtgtcatcctattcataagaaataccagctggctgttactaaactttttggtcgg
tacatggttgccattgttgtagcctctgaaaaggtagcaaaagattgtattcgatttctg
aaggaggaaagagctgaacctgagacgttccttgcactagattaccttgatatcaaacca
atcaatgaaagattgagggagattaaaggctgtaaaatgatgattgatgtcataaagact
cagtttcctcagctgaagaaagtaattcagtttgtgtgtggaaatggccttgtctgtgag
actctggaagaagcaaggcatattgccttcgctggacctgaaagacggaaaacagtagct
cttgatggaacattatttttaaaatctggagtgatctctggagggtcaagtgacttaaaa
tccaaggctagatgctgggatgagaaagagttaaagaatttaagagacaggagaacccaa
ctaatccaagaattaaaggatttaatgaaggtagtgcgcaaggaagcagatttgaaacaa
atacaggctctaatacaaggaactactacacgactcaaatatgcacaaagtgaactagaa
atcattaaaaagaagcaccttgctgctttttaccgggaacaatctcagctacaaagtgaa
ctactaaatattgaatctcaatgtgccatgttgagtgaaggaatcaaagaacgacaacaa
agaattaaagaatttcaacgaaagatagataaggttgaagatgatatttttcaacacttc
tgtgaagaaattggtgtagaaaatattcgtgaatttgagaacaagcatattaaacagcaa
caggaagctgatcaaaaaagattagaatttgagaaacaaaaaactcggcttaatattcaa
cttgaatatagtcgcaatcatctgaagaagaaactgaataagattaacacattaaaagaa
accatcgagaaaggtagagaagacactgatcacctaaagaaggttgaaaaaaattgtctc
aaaattgtggatgaactcatggaaaaacagcagcaacttaaggatgaatttttcactcag
aataccaacgttgagaaagtccaagctcaaattgaagaggaacgaaagaagtttttggcc
attgatagggaagtgggaaaatggcaaaaagaagttgtgatccttcagagttctctggaa
cagaatcggttagagaagcataacatgttgcttgactgcaaagttcaagacattgaaata
gttcttttgttggggtcgctggatgacatcattgaagtggagttgggaactgaagcagaa
ggtacccaggcaacaactgatatatatgaaaaagaagcagccattgaggtggactacagc
tctctaagagaggatttgaaggctctacaatctgataaagaaattgaggaccagcttaga
ctcctcctacaacaagtagcatcccaagaagatatcctgttgaagacagcagccccaaac
ctaagagccgtggagaacctgaagactgtcagagacaagtttcaggagtccatagatgct
tttgaggccagcagaaaggaagccagaatatgtaggcaagagtttgaacacgtgaaaaaa
aggagatatgatcttttcaaccagtgttttgagcacatctcaatctcaattgatcaaatc
tacaagaagctctgcagaaacaacagtgcccaagcatttcttagcccagagaacccagaa
gagccttacttggagggaattagctataactgtgtggccccaggcaaacggttcatgccg
atggataacttgtccgggggagagaagtgcgtggcagcgctggcgctcctgttcgctgtg
cacagttttcggcctgctccattctttgttttagatgaagtagatgcagccctggacaat
actaacattggcaaagtgtcaagttatattaaagagcagactcgggaacagtttcagatg
ataatcatttccctgaaagaggagttctattccaaagctgatgcactgataggcatctat
ccagagcacgatgactgcatgttcagccgagttttgaccctagatctttctcagtatcca
gatactgaaggcagagaaagcggcaggagacagcgcaagccccactag
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