Bubalus bubalis (water buffalo): 102402970
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Entry
102402970 CDS
T05912
Name
(RefSeq) helicase SRCAP isoform X2
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102402970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbub03036
]
102402970
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
102402970
SWR1 complex
102402970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
102402970
NCBI-ProteinID:
XP_044792308
LinkDB
All DBs
Position
24:complement(15425929..15456762)
Genome browser
AA seq
3185 aa
AA seq
DB search
MQSCPSPAHPQLPILQTQMVSDGMTGSNPVSPASSSSPASSGAGGISPQHIAQDSSLDGP
PGPPDGATVPLEGLSLPQPTDLANRGPKWEKSHAEIAEQAKHEAEIETRIAELRKEGFWS
LKRLPKVPEPPRPKGHWDYLCEEMQWLSADFAQERRWKRGVARKVVRMVIRHHEEQRQKE
ERARREEQAKLRRIASAMAKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQT
EKYSDLLSQSLNQPLASSKAGSSPCLGSSSAASSPPPPGSRMDDEDGDFQPQEEEEEDDE
ETIEVEEQQEGNDAETQRREIELLRREGELPLEELLRSLPPQLLGGPSSPSGTPSSHESD
TRDGPEEGGEEEPSQVLKVKPPPSVTQRNKQPWHPDEDDEEFTANEDEAEDEEDTIAAEE
QLEGEVDHAMELSELAREGELSMEELLQRYAGAYASDASAPGSGSSEEEDEDEVEANSSD
GEPEGATEAEEAPQEDSSSQSDSAEEQSEDEDEEHSEEEETSESSESEESESEESEESRS
QSQADEEEEEDDDFGVEYLLARDEEQSEADGGSGPPTPGPTTTLGPKKEITDIAAAAESL
QPKGYTLATTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTI
SLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTK
PNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLT
GTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLR
PFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFMSVINIL
MQLRKVCNHPNLFDPRPVTSPFITPGICFSTASLVLRATDVHPLQRIDMGRFDLIGLEGR
VSRYEADTFLPQYRLSRRVLLEVATAPDPPPRPKPVKMKVNRMLQPVPKQEGRTVVVVNS
PRTPLGPVPVRPPPGPELSAQPSPGPTPPVLPAPLLVSASPSGPPLIPASRPPGPVLLPP
LQPNSGPLPQVLPSPLGVLSGTSRPPTPTLSLKPAPPAPVRLSPAPPPGSSNLLKPLTVP
PAYAFPNAAATTTSTSTVTAPTTAAPAPAPAPQRLILSPDMQARLPSGEVVSIGQLASLT
QRPVASTGGSKPLTFQIQGNKLTLTGAQVRQLAVGQPRPLQMPPTMVNNTGVVKIVVRQA
PRDGLTPVPPLAPAPRPPSSGLPAVLTPRPTLPPGRLPTPSLGTARASIPTSTLVRPLLK
LVHSPSPEVSASAPGAAPLTISSPLPVPSSLPGPASSPVPVPNSSPLASPVSSTVSIPVS
SSLPISVSATLPSPASAPLTIPISAPLPVSASGPTLLTNVTPTLTPVVSAAPGPPSLAPV
GASPSASALTLGLASTPSLSPSQAPGHPLLLAPASSHVPGLNSAVAPACSPVLVPASALA
NPFPATPNPAPAQASLLAPAPTASQALATSLAPMVAPQTAILAPSPAPPLAPLPVLAPSP
GPTSVLASSQTSVPVLASSSTPGTPLASASSLGPAPAAALAPSSAQTMVPAPVPSPLPSP
ASTQTLALPPALASTLGGSSPSQTLSLGTGNPQSPFSAQTLSLTPASSLVPAPAQTLSLA
PGPPLGPSQTLSLAPAPTLAPVSPMGPAPAHTLTLAPVSSSASLLAPASVQTLTLSPAQV
PVPTLGPAAAQTLALAPASTQSPASQASSLVVSSSGAAPLPVTMVSRLPVSKDEPETLTL
RSGPPSPPSTATSFSGPRPRRQPPPPPRSPFYLDSLEEKRKRQRSERLERIFQLSEAHGA
LAPVYGTEVLDFCTLPQPVASPIGPRSPGPSHPTFWTYTEAARQAVLFPQQRLDQLSEII
ERFIFVMPPVEAPPPSLHACHPPPWLAPRQAAFQEQLAHELWPRARPLHRIVCNMRTQFP
DLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGST
RVEQRQALMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCH
RIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTIRELFDMP
LEEPSGSSVPSAPDDEEETVASKQTHILEQALCRAEDEEDIRAATQAKAEQVAELAEFNE
NDGFTAGEGEEAGRPGAEDEEMSRAEQEIAALVEQLTPIERYAMKFLEASLEEVSREELK
QAEEQVEAARKDLDQAKEEVFRLPQEEEEGPGAGDEVSCGTGGGSHRRSKKAKAPERPGT
RVSERLRGARAETQGPNHTPVTSTHHTRSTSTPPRCSPARERVPRPAPRPRPPPASAPAA
IPAPIPVPISAPIPISAPNPVTMLPVHILPSPPLPSAQIPPPSCSSACTPPPACTPPPAQ
TPPPAQTSLLTPSSPLLLGLPSVPMSPPVTNLPLGLGPEAELCAQAMASTESLELADTAS
SETSPITLVPPKDLLPVAVEILPVSEKNLSLTSSAPSPTLAAGSVPNGQEQEVPEPAEAT
ILSVLPDGEEMPMCLSESNRLELPPSAASDEPLPEPLETDKNSEELVEAQIPTSTPEKPQ
ELVSAEATAPSTSSSATSTPEGSSPARPPRRRTSADVEIRGQGAGRPGQPPGPKVLRKLP
GRLVTVVEEKELVRRRRQQRGTASTLVPGVSETGTSPGSPSARSMSGPESSPPTSGPCEV
APPSTLPTPTHQPFIARRRIELGLTGGGSSENGEGALLAITPPAVKRRRGRPPKKNRSPA
DAGRGVDEAPLSTSKGKTNGADPVPGAETLIVAEPVLAPQLIPGPQPLGPQPLGPQPVHR
PEPIILSPVEKRRRGRPPKARDLPLPGTTSSPGDGNLESRTQPLPLPPPLPPLPSLLSCP
TAAAASTITTLTISTSPPKRKRGRPPKNPPSPRPSQLPVLDRDSSSVLESCGLGKQRQPQ
GQGESEGSSSDEDGSRPLTRLARLRLEAEGMRGRKSEGSMVVAVIQDDLDLADSGPGGLE
LTSPVVSLAPKLRSTRLRPGSLVPPLETEKVPRKRAGAPVSSGPGLAKRTRLQPPSPLGP
EGSVEESEAEASGEEEEGDGTPRRRPGPRRLGGATTQGDQRILRSSAPPHLAGPTISHRG
RKAKT
NT seq
9558 nt
NT seq
+upstream
nt +downstream
nt
atgcagagctgcccctcccctgctcaccctcagctcccaatcttgcaaacacagatggtg
tcggacggcatgacaggcagcaatcccgtgtcccctgcctcatccagttccccagcctct
agtggggcaggcggcatctccccccagcatatagctcaagattcctctttggatggacct
ccagggcccccagatggtgccacagtgcccttggaggggctcagcttaccccagcctact
gacctggctaacaggggcccaaagtgggagaagagccatgctgaaattgcagagcaggcc
aagcatgaggctgagattgagactcgaattgctgagctgcggaaggagggtttctggtca
ctgaagaggctccctaaagtgcctgaacctccccgccccaagggccactgggactatttg
tgtgaggagatgcagtggctctctgctgactttgctcaggagcgccgttggaaacggggt
gttgcccgtaaggtggtgcgaatggtgatccggcaccacgaggagcagcggcagaaagag
gaacgggcccggagggaggagcaggccaaactgcgccgaatcgcctctgccatggccaag
gatgttaggcagttttggagcaatgtggagaaggtggtacaattcaagcaacagtcccgg
cttgaggaaaagaggaaaaaagccctggacctgcacctggacttcatcgtggggcaaact
gagaagtactcagaccttctgtcgcagagcctcaaccagccgctagcctccagcaaggct
ggttcttccccttgccttggctcttcctcggctgcctctagtcctccacccccaggttcc
cggatggatgatgaagatggggacttccaaccccaagaggaggaggaagaggatgatgag
gagacgattgaggttgaagaacagcaggaaggcaatgatgcagagacccagaggcgtgag
attgagctacttcgtcgtgagggtgaactgccactggaagagctgctccgttccctcccc
cctcagctgctaggagggccttccagcccctcaggaactccctcgtctcatgagagtgac
acccgagatggtcctgaagaagggggtgaagaagaaccctctcaggtgttgaaggtaaag
cccccaccctctgtcacacagcgcaacaaacagccttggcatccagatgaggatgatgaa
gagtttactgccaatgaggatgaagcggaggatgaagaggataccatagcagctgaagag
cagttggaaggggaggtggatcatgccatggagctgagcgagttggctcgagaaggtgag
ctgtctatggaggagttactgcagcggtatgcaggagcctatgcgtctgatgcctctgcc
ccaggttctgggagtagtgaagaggaagatgaggatgaagttgaggctaacagctctgac
ggtgaaccagagggggccacagaagctgaagaggctcctcaggaggatagtagcagtcaa
tcagactctgctgaggaacagagtgaggatgaggatgaggaacattcggaagaggaagaa
acaagtgagagctcggaatcagaggaatccgagtctgaggaatctgaggagtcccgatca
cagagccaagcagatgaggaagaggaggaagatgatgactttggggtggagtacttgctt
gcccgggatgaagagcagagtgaggcagatgggggcagtggacctcccaccccagggccc
accaccactctaggccctaagaaagaaattactgacatcgctgcagcagctgaaagtctc
cagcccaagggttataccttggccactacccaggtgaagacacccatccccttgctcctg
cggggccagctccgagagtaccaacacattgggctggactggctggttactatgtatgag
aagaagcttaatggcattcttgctgatgagatggggttaggcaagaccatccagaccatt
tccctgcttgcccacttggcctgtgagaaaggtaactggggtccccatttgatcattgtc
cccaccagcgtgatgttgaactgggagatggagctgaaacgttggtgccccagctttaaa
atccttacttactatggagcccagaaagagaggaagctcaagcggcagggctggaccaag
cccaatgccttccatgtgtgtatcacatcttacaagctggtgctgcaggaccaccaggcc
ttccgccgcaagaactggcgctatcttatattggatgaggctcagaacatcaagaacttc
aagtcacagcgctggcagtcactgctcaacttcaacagccagagacgcctgctcctgaca
ggaacacccttgcaaaacagcctcatggaactgtggtccttgatgcactttttgatgccc
catgtcttccagtctcatcgcgagttcaaagaatggttctctaaccccctaactggcatg
attgagggcagccaagaatacaatgaaggtctagtcaagcgtcttcacaaggttttgcgg
ccttttttgctgcgccgagttaaggtggatgttgagaagcagatgcctaaaaagtatgag
catgttatccgctgccggctctccaagcgccagcgctgtctttatgatgacttcatggcc
cagaccacaactaaggagacgctagccacaggccacttcatgagcgtcatcaacattctg
atgcagctgcgaaaagtctgcaatcatccaaacctatttgatcctcgacctgttacctcc
cccttcatcactccaggcatctgtttcagcaccgcctctttggtgctaagggccactgat
gtgcaccctctccagcggatagacatgggtcggtttgacctcattggcctggagggtcgt
gtctctagatatgaggctgacacatttctaccccaataccgcctttcccgtcgggttctt
ctagaagtggctactgctcctgaccccccaccccggcccaagccagtcaagatgaaagtc
aacaggatgctgcagccagtgcccaagcaagaaggccggacagtggtggttgtgaacagt
ccacggacccccctgggccctgtcccagtccgaccccctccaggccctgaactctcagcc
cagcccagccctggcccaacccccccagtgctgccagcaccactgctggtgtcagcctcg
ccttccgggcccccacttattccagcatcccggcctcctggccctgttcttttgccccca
ctgcagccaaacagtgggcctctcccccaggtgttaccatcccctctgggggtcttaagt
gggacctcacggcctcccacaccaaccctgtccttgaagccggccccacctgcccctgtt
cgcctgagccctgccccaccaccaggctcctccaacctgttgaagccgcttacagtgccc
ccagcctatgcgttcccgaatgctgctgccaccaccacctccaccagcacggtcactgct
cccactacggcagcgccagctcctgctcctgcgccacagcgcctcatcctgtctcccgac
atgcaagctcgcctgccctcaggtgaagtggtcagcatcgggcagttggcctcactaaca
caacgtccagtggctagtacagggggaagcaaacctctcaccttccaaatccagggcaac
aagctgactttgactggtgcccaggtgcgccagcttgctgtggggcagccccgcccgctg
caaatgccaccaaccatggtgaataatacaggcgtggtgaagattgtagtgagacaggcc
cctcgggatggactgactcctgttcctccgttggccccagcaccccgacctccaagctct
gggcttccagctgtgttgactccacgccccacattaccccctggccgtctacccacacct
agtctgggtactgcccgggcttccatacccacatccactctcgtgaggccacttctcaag
ctggtccacagtccttcgcctgaagtcagtgcttcagcacccggagctgctcccttgacc
atctcttctcctctccctgtgccatcttcactccctggaccagcctcttctccagtgcca
gtccccaactcctctccccttgctagtcctgtgtcttctacagtctcaattccggtgtca
tcttcacttcccatctctgtctccgcaactcttccttccccagcctcagctccactcacc
attcccatctcagcccccttgcctgtttcggcttcgggccccactcttttgactaatgtg
actccaacactgacaccggttgtctcagcagcccctggacctccttctttggcaccagtt
ggggcttctccatcagcgtcagccttgactctaggtttggcctcaactccatccctgtcc
ccatctcaggcacctggtcaccctctattgttggctccggcctcttcacatgttccaggg
ttgaactcagccgtggccccagcatgttcacctgtcctggtgccggcttctgctctggcc
aatccttttccggcaacaccaaatccagctccagctcaggcttcccttttggctccagca
cctactgcatctcaggctctggccacctctctggctcccatggtggctccacagacagca
atcctggctccttctccagctcctcctctggctcctcttccagtcctggctccatcacca
ggtcctacttctgtcctggcttcatcgcagacttcggttccagttctggcttcatcgtct
actccaggaacgcctttagcctcagcctcctcattggggccagccccagctgctgcgttg
gctccatcatcagctcaaactatggtaccagccccagttccatcacctcttccgagtccg
gcttctacgcagacattggctttaccccccgctttagcatccactcttggcggctcgtct
ccatctcagacactgtctttgggaactgggaatcctcaaagtcccttttcagctcagacg
ttgtcattgactccagcatcatccttagtaccagctccagcccaaacactgtctttagca
ccaggaccaccattgggtccatctcagacgctgtctttggctccagcacccactctggct
ccagtttctcctatgggcccagccccagctcacacgctgactttggctccagtatcatca
tctgcttcactcctggccccagcttcagtgcagacactgactttgagccctgcccaagtt
ccggtgcccaccttgggcccagcagcagctcagactctggcattggccccagcctcaaca
cagagcccagcttcccaggcatcttcccttgtggtttcgtcatctggcgccgctcccttg
cctgtcaccatggtatcccggctacctgtttccaaggatgagcctgaaacactgacatta
cgctctggtccccccagccctccctccactgctacctcgttcagtggtccccgacctcga
cgacagcccccaccaccacctcgttcccctttctatctggactctctggaggaaaagagg
aagcggcagcggtctgaacgcctggaacggattttccaacttagtgaggctcatggggcc
ctggcacctgtgtatgggactgaagtcttggatttctgtaccctgccccaacctgttgcc
agccccatcggccctcgttctcctggccccagccaccccaccttttggacttataccgag
gctgcccgccaggctgtactgtttccccagcaacgactagaccagctgtcagaaatcatt
gagaggttcatctttgtcatgcctcctgtggaggcacctcccccttccttgcacgcctgc
cacccacctccttggctggccccacgtcaggcagccttccaggagcaattggctcatgag
ctctggcctcgggctcgtcctctgcaccgtattgtatgtaacatgcgtacccagtttcct
gacttgaggctcatccagtatgattgtggaaagttgcaaacgttggcagtgctgttgcga
cagctcaaggcagagggccaccgggtgctcattttcacccagatgacccgaatgctggat
gtattggagcagtttctcacctaccatgggcacctctacttgcgtctggatgggtcgact
agagttgaacagagacaggctttgatggaacgattcaatgcagacaaacgcatattctgc
ttcatcctttcaactcggagtgggggtgtgggcgtgaacctgacgggggcagacactgtt
gttttttatgacagcgactggaatcctaccatggatgctcaggcccaggatcgctgtcac
cgaattggccagacccgagatgtccacatatataggcttatcagtgaacggacagtggaa
gagaacatcctaaaaaaggcaaatcagaagagaatgttgggagatatggctattgaggga
ggcaacttcaccacagcctattttaaacagcagaccatccgagagttgtttgatatgcct
ctggaggagccatctggctcatctgtaccctctgcccctgacgatgaggaggagactgtg
gccagcaagcagacccatatcctggagcaggcattgtgtcgagcagaggatgaagaggat
attcgtgcggccacccaggccaaggctgagcaggtggctgagcttgcagaattcaatgag
aatgatgggtttactgctggtgagggagaggaggctggtcggcctggggctgaagatgag
gaaatgtcacgggctgagcaggaaattgctgcccttgtagaacagctgacccccattgag
cgctatgccatgaaattcctggaagcctccctggaggaggtgagccgagaggagctcaag
caggcagaagagcaagtggaagctgcccgcaaggacctggaccaagccaaggaggaggtg
ttccgcctaccccaagaggaggaggaggggccaggggctggggatgaggtttcctgtggg
actggtggaggcagccaccggcgcagtaagaaggccaaggcccctgaaaggccagggact
cgcgtcagtgagcgtcttcgtggagcccgggctgaaactcaagggccaaaccacactcct
gtcacatccacccatcatacccgcagcacctccacaccccctcgctgcagccctgctagg
gaacgagttcctcggccagcacctaggcctcgaccccctccagcttcagctcctgctgca
attcctgccccaatccctgtcccaatctctgccccaatccctatttcagccccaaaccca
gtaaccatgcttcctgtccatatcttgccttctccccctctcccttctgcacagattcct
cctccctcttgttcttctgcctgtacccctcctcctgcctgtactcctccaccagctcaa
accccacctccagcccaaacttctctcttaactccttcctctcctcttctgcttggccta
ccttctgtgcccatgtcgccaccagtcacgaacctccccttgggcctggggcctgaggca
gagctgtgtgcacaagcaatggcatctactgagtccctggagctggctgatacagccagt
tccgagacttccccaattactcttgtgccccctaaggatctgttgccagttgctgttgag
atcctgcctgtgtcagagaagaacctttctctcacctcttctgcacctagcccaaccctg
gcggctggcagcgtccccaacggtcaagagcaggaggtacccgagcctgccgaggcgacc
atcctctcagtgctgcctgatggtgaggaaatgcccatgtgtctgagtgagagcaatagg
ctggagctcccaccctcagcagcatctgatgagccacttccagagccactggagactgat
aagaactcggaagagctggtggaggcccagatcccaacctctactccagagaagccacag
gaacttgtttcagctgaggccacagccccatcaacttcatcctcggccacctctacacct
gagggttcttcgccagcccggccccctcggcgtcgtaccagtgcagatgtagaaattagg
ggtcaaggggctggtcggccagggcagcctccaggtcccaaagtgcttcgcaagctgcca
ggacggctagtgactgtggtagaggaaaaggaactggtgaggcgtcggcgacagcagcgg
ggtactgccagcacccttgtgcctggggtctctgagactggtaccagcccgggaagccca
tcagcccgcagcatgtcggggccagaatcctcacctcccaccagcggtccctgtgaagtt
gctcccccatccacactgcccactccaacccatcagcccttcatagctcgccgtcgcatt
gagctggggttaactggtgggggcagctcagaaaatggagaaggggcactgcttgccatc
acccctcctgctgtgaaacgtcggagggggaggccccccaagaagaacaggtctccagcg
gatgctggacgaggggtggatgaggcacctttatccacctctaagggaaaaaccaatggg
gccgatccagtccctggggctgagacccttattgttgcggagcctgtccttgcaccccag
cttattcctgggccccagcctctcgggccccagcctctcggaccccagccagttcacaga
cccgagcccatcatcctatcacctgtggagaaaagaaggcgtgggcggccccctaaggcc
cgagatctgccccttcctgggaccacttcctctccaggggatggcaacttagagagccgg
acacagccactcccgctgccgccacccctgccgccactcccgtccctcctgtcctgtccc
accgctgctgccgccagcactatcaccactctcaccatttcaacgtccccacccaagcgg
aagcggggccgacctcccaagaatccaccatcacctcggcccagccagctccctgtcttg
gaccgtgacagctcttctgtcctcgagagctgtggattggggaagcagcggcaaccccag
ggccagggggagagtgagggtagttcatctgatgaggatggaagccgccccctcacccgc
ctggcccgcttacgtctggaagcagagggaatgcggggacgaaagagtgaagggtccatg
gtggtggctgtaattcaggatgacctggatttagcggatagtgggccaggcgggttagaa
ttgacatctcccgtggtctcattagctccaaaactgcgctcgactcggctgcgtccaggg
tctctagttccccctctagagactgagaaggtgcctcgcaaacgggcaggggccccagtc
agcagtggtcctgggctggcaaagcggacccgcctacagcccccaagtcccctggggcct
gagggctcagtagaggagtctgaggccgaagcctcaggtgaggaggaggaaggggatggg
accccacggcgccggcctggcccccgccggcttggtggggccaccacccaaggggaccag
cgtatcttgcgcagcagtgcccctccccacttggctggccctaccattagtcacagaggc
cgcaaggccaagacgtga
DBGET
integrated database retrieval system
