Bubalus bubalis (water buffalo): 102403157
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Entry
102403157 CDS
T05912
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X2
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04612
Antigen processing and presentation
bbub05145
Toxoplasmosis
bbub05152
Tuberculosis
bbub05164
Influenza A
bbub05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
102403157 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
102403157 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
102403157 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
102403157 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
102403157 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bbub01001
]
102403157 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
bbub04054
]
102403157 (CIITA)
Enzymes [BR:
bbub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
102403157 (CIITA)
Protein kinases [BR:
bbub01001
]
Serine/threonine kinases: Other
TAF1 family
102403157 (CIITA)
Pattern recognition receptors [BR:
bbub04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
102403157 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
LRR_9
AAA_22
CARD
Motif
Other DBs
NCBI-GeneID:
102403157
NCBI-ProteinID:
XP_006041169
EnsemblRapid:
ENSBBUG00015025671
LinkDB
All DBs
Position
24:complement(32621174..32680760)
Genome browser
AA seq
1191 aa
AA seq
DB search
MNHFQTILSQVRMLLSSHRPNQVQELLDNLLAEELLSREYHYALLHESDGEALARKISLT
LLEKGDPDLALLGWIWSGLQAPTAERDPSYKDPGGSGQCPTMELGPLEGSYLELLNSSAD
PLQLYHLYDRMDLTGEEEIELCSEPDTDTINCEQFSRLLCDMEGDEETREAYANIAELDQ
YVFQDTQLEGLSKDIFIEHIGLEEIISESVEVLEEAGQKSQKRPEPLTMPVVTGTFLVGP
VSDSLVQPCPPPPALFNTEPASSQTRLKDAAPPSSSLLSCLSLPAGPIQIIPTLPTLPQG
LWPISGTGTGVSSILIYQSEMPPASQTPPSSGPAVQSLPKSPDRPGSASPFAPSAADLPS
MPEPALTSRAGLTEDEMSPSKCPAAGGASSKLPKWPESVEQFYQSLRDKYQAQPTSPEGT
LVETDLVRVRLEKSSGKSQERELATLDWAERQPARGGLAEVLLAASDCQQPRETRVIAVL
GKAGHGKSHWARAVSRAWAHGQLPQYDFVFCVPCHRLDRPGTSYRLQDLLSSLGPQPLPV
DDEVLSYIARRPNRILLILDGFEDLEAHDGSLHSAGGPGSAEPRSLRGLLGGLLQRKLLR
GCTLLLTAWPRGRLAQSLSKVDALFEVAGFSVQQAEAYVRRYFELEGTAEHQERALALLQ
AQPFLLSHSHSPTVCRAVCQLAEALLQRSDGAQLPSTLTGLYVGLLGPAARDGPPGALAE
LARLAWELGRAHQRALKAGCLLSAEARAWAAAQGWLRPTPGAPETELAFSSFLLQCFLGA
VWLALSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLVGLVFQPRAGCLGALAGPAAA
TSADRKQKVLTRYLKRLQPGTLQAGRLLELLHCAHEALDPGLWQHVLQGLPAHLSFLGTR
LTPPDTHVLGSALEAAGQDFSLDLRSTGVDASGLGSLVGLSCVTRFRAALSDTVELWESL
QQRGEAKLLRAVEEKFTIEPFKAKSMKDVEDLGNLVQIQRTRSSSEAAAGELPAVRDLKK
LEFALGPVLGPQVFPKLVKILEAFTSLQHLDLDSLSENKIGDEGVAQLSATFPQLKALET
LNLSQNNITDVGACKLAEALPALAASLLRLSLYNNCICDAGAESLAHALPDMVSLRVLDV
QYNKFTAAGAQQLAAGLRKCPQVKTLAMWTPTIPFGVQEHLQQLDPRIILR
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacttccagaccatcctgtctcaggtccggatgttgctctctagccatcggccg
aaccaagtgcaggagcttctggacaaccttctggcggaagagctcctctccagggagtac
cactatgccctgctccatgagtctgatggtgaggctctggccaggaagatctccttgacc
ctgctggagaaaggagacccagacttggccctcttggggtggatctggagtgggctgcag
gcccccacagcagagagggaccccagctacaaggaccctggtggcagtggacagtgccca
accatggagctggggcctctagaaggcagttacttagaacttctcaacagcagtgctgac
cctttgcagctctaccacctctacgaccggatggatctgacaggagaagaagaaatagag
ctctgctcagagcctgacacagacaccatcaactgcgaacagttcagcaggctgttgtgt
gacatggaaggtgatgaagagaccagggaagcttatgccaatatcgcggaattggaccag
tacgtcttccaggacacccagctggagggcctgagcaaagacattttcatcgagcacata
ggattggaagaaataatcagcgagagtgtggaggtgctggaggaagcagggcagaaaagt
cagaaaagacccgagcccctcaccatgcctgtggtgactggcactttcctggtggggcca
gtgagcgactccttggttcagccctgcccgccacctcctgctctgttcaacacggagcca
gcatccagccagacccggctgaaggacgcggcgcctccttccagttccttgttgagctgc
ctgagtcttcctgcgggacccattcagattatccccactctccccactctgcctcagggg
ctctggccgatctcagggactgggacgggggtctccagtatactcatctaccaaagtgag
atgcccccagccagccaaacacccccctccagcgggcctgctgtccagagccttcccaag
tccccagaccggcctggctccgccagcccctttgccccatctgccgctgacctccccagc
atgcccgaaccggccctgacctcccgtgcaggcctgacagaggatgagatgtcccccagc
aaatgcccagcagctggcggggcctccagcaaacttcccaagtggcctgagagcgtggag
cagttctaccagtcactacgggacaagtaccaggcccagcccaccagcccggaaggcacc
ctggtggagacggacctggtgagggtgaggctggagaagagcagcgggaagagccaggag
agagagctggccaccctggactgggcagagcggcagccggcccgagggggtctggccgag
gtgctgctggctgccagcgactgccagcagccccgagagacgcgggtgatcgctgtgctg
ggcaaagcgggacacgggaagagtcactgggcacgggccgtgagccgggcctgggcccac
ggccagctgccacagtacgactttgtcttctgtgtcccctgccatcgtttggaccgtccg
gggacctcctaccgcctgcaggatctgctgtcctccctgggcccgcagccgttgccagtg
gacgatgaagtcctcagttacatcgcgaggaggcccaaccgcatcctgctcatcctggat
ggcttcgaggacctggaagcccacgatggctccctgcacagcgcagggggccccgggtcg
gcagagccccgctccctccgggggctgctggggggcctcctccagcgcaagctgctgcgg
ggctgcaccctgctgctcacggcctggccccggggccgcctggcccagagcctgagcaag
gtggacgccctgtttgaggtggccggcttctcggtccagcaggctgaggcctacgtgagg
cgttactttgagttggaggggaccgctgagcaccaagagagggccctggcgctcctgcag
gcccagccgttcctcctgagccatagccacagccccaccgtgtgccgggccgtgtgccag
ctcgcagaggccctcctgcagcggagcgatggagcccagctgccctccacgctcacgggc
ctctacgtgggcctgctaggcccagcagctcgcgacggacccccgggggccctggcggaa
ttggccaggctggcctgggagctgggccgtgcgcaccagagggccctgaaggcgggctgt
ttactgtcggcagaggcgagggcctgggctgcggcccaaggctggttgcggcccaccccg
ggggccccggagacggagctggccttttccagcttcctcctgcagtgcttcctgggggcc
gtgtggctggctctgagcggcgaaatcaaggacaaggagctgccgcagtatctggccttg
accccgaggaagaagcggccctatgacaactggctggagggcgtgccgcgcttcttggtg
ggactggtcttccagcctcgcgccggctgcctgggggccctggcaggcccggcggcagcc
acgtcggcggacaggaagcagaaggtgctcacgaggtacctgaagcgtctgcagcccggg
acgctgcaggcggggcggctgctggagctgctgcactgtgcccacgaggcgctggacccc
gggctctggcagcacgtgctgcaggggctccctgcccacctctccttcctgggcacgcgg
ctcacgcctcccgacacccacgtgctgggcagcgccctggaggctgcgggccaagacttt
tccctggacctccgcagcactggcgtcgacgcctccggactggggagcctcgtgggactc
agctgtgtcacccgtttcagggctgcattgagtgacactgtggagctgtgggagtccctg
cagcagcgtggggaggccaagctactccgggcagtggaggagaagttcaccattgagcct
ttcaaggccaagtccatgaaggatgtggaagaccttggcaatctcgtgcagatccagagg
acaagaagctcctctgaagcagcagctggggagctccctgctgtccgagacttaaagaag
ctggagtttgcgctgggccctgtcttgggcccacaggtttttcctaaactggtgaagatc
cttgaggcctttacttcccttcagcatctggacctggactcactgagcgagaacaagatt
ggggacgagggtgtcgcccagctctcagccaccttccctcagctgaaggccctggagaca
ctcaacttgtcccagaacaacattaccgacgtgggtgcctgcaagctggccgaggctctg
cccgcgctggccgcgtccctcctcaggctgagcttgtacaataactgtatctgcgacgcg
ggagccgagagcctggcacacgcgcttccagacatggtgtccctccgcgtgctggacgtc
cagtacaacaagttcacagccgctggggctcagcagcttgccgctggcctgagaaagtgc
cctcaggtgaagacactggcgatgtggacgcccaccatcccctttggcgtccaggaacac
ctgcagcagctggacccacgaatcattctgagatga
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integrated database retrieval system
