Bubalus bubalis (water buffalo): 102403173
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Entry
102403173 CDS
T05912
Symbol
VLDLR
Name
(RefSeq) very low-density lipoprotein receptor isoform X2
KO
K20053
very low-density lipoprotein receptor
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub05017
Spinocerebellar ataxia
bbub05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
102403173 (VLDLR)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
102403173 (VLDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbub04131
]
102403173 (VLDLR)
Membrane trafficking [BR:
bbub04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
102403173 (VLDLR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
EGF_LRP2
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
102403173
NCBI-ProteinID:
XP_025137351
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All DBs
Position
3:complement(104349145..104381320)
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AA seq
804 aa
AA seq
DB search
MGTSARWALWLLLALCWAPRESGASGAGRKAKCEANQFQCTNGRCITLLWKCDGDEDCAD
GSDEKNCVKKTCAESDFVCNNGQCVPNRWQCDGDPDCEDGSDESPEQCRNVTCSSDEFTC
SSGRCISRNFMCNGQDDCSDGSDELDCAPPTCGPHEFQCSTSSCIPISWVCDDDADCSDQ
SDESLEQCGRQPVIHTRCPASEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPD
QFECEDGNCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQK
QDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQ
NPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEY
IQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHVKMIDNVYNPAAIAVD
WVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKI
EKAGMNGFDRRALVTADIQWPNGITLDLIKGRLYWLDSKLHMLSSVDLNGQDRRIVLKSL
EFLAHPLALTIFEDRVYWIDGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPS
GKNWCEEDMENGGCEYLCLPAPQINDHSPKYTCSCPNGYNLEDNGRECHRINVTTAVSEV
SVPPKGTSAAWAILPLLLLAMAAVGGYLMWRNWQHKNMKSMNFDNPVYLKTTEEDLSIDI
GRHSASVGHTYPAISVVSTDDDLA
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgtccgcgcgctgggcgctctggctgctgctcgcgctgtgctgggcgccccgg
gagagcggcgccagcggagccggaagaaaagccaaatgtgaagccaaccagttccagtgc
acgaatggccgatgcatcacactgctgtggaaatgtgatggggatgaagactgcgctgat
ggcagtgacgagaagaactgtgtgaagaagacatgcgccgagtctgactttgtatgcaac
aatggccagtgtgttcctaatcgatggcagtgtgacggggatcctgactgtgaagatggt
tctgatgaaagcccagaacagtgccgcaacgtaacgtgtagctctgatgagttcacctgc
tccagcggccgctgcatctccaggaacttcatgtgcaacggccaggatgactgcagcgat
ggcagcgatgagctggactgcgccccaccaacctgcgggccccacgagttccagtgcagc
acctcctcctgcatccccatcagctgggtgtgcgacgatgacgcagactgctcggaccag
tcggatgagtccctggagcagtgtggccgccagccagtgatccacaccaggtgcccggcc
agcgagatccagtgtggctctggcgagtgcatccacaagaaatggcgatgcgacggggat
cccgactgcaaggacggcagcgatgaggtcaactgtccttcccgaacctgccgacccgac
cagtttgagtgtgaggacggcaactgtatccacggcagcaggcaatgtaacggcatccga
gactgcgtggacggttctgatgaagtcaactgcaagaatgtcaatcagtgcttgggtccc
gggaagttcaagtgcagaagtggggaatgcattgatatcagtaaagtgtgcaaccagaag
caggactgcagggactggagtgacgagcccctgaaagaatgccatgtaaatgaatgcttg
gttaataatggcggatgctcccatatctgcaaagacctagttataggctatgaatgtgac
tgtgcagctgggtttgaactcatagataggaaaacctgtggagatattgatgaatgccaa
aatccgggaatctgcagccaaatttgtatcaacttaaaaggcggttacaagtgtgaatgt
agtcgtggctatcaaatggatcttgccacgggcgtgtgcaaggcagtaggcaaagagcca
agtttgatcttcaccaatagacgagacatcaggaagattggcttggagaggaaagaatat
atccaactagttgaacagctgagaaacactgtggctctcgacgctgacatcgctgctcag
aaactgttctgggctgatctaagccaaaaggccatcttcagtgcctcaattgatgacaaa
gttggtagacatgttaaaatgatcgacaatgtctataatcctgcagccattgctgttgat
tgggtgtacaagaccatctactggactgacgcggcttctaagactatttcagtagctacc
ctagacggaaccaagaggaagttcctgtttaactctgacttgcgagagcctgcctccata
gctgtggacccgttgtctggctttgtttactggtcagactggggtgaaccagctaaaatt
gaaaaagcaggaatgaatgggtttgacagacgggcgctggtgacagcggacatccagtgg
cctaatggaattacacttgaccttataaagggccgcctctattggctggattccaaattg
cacatgttatccagtgtggacttgaatggccaagatcgcaggatagtcctgaagtctctg
gaattcctagctcatcccctggcactcacaatatttgaggatcgtgtctactggatagat
ggggaaaatgaagcagtctatggtgccaataaattcactggctcggagctggccactcta
gttaacaaccttaatgatgcccaggacatcattgtctatcacgaacttgtacaaccatca
ggtaaaaactggtgtgaagaagatatggagaatggaggatgtgaatacctctgcctgcca
gccccacagattaatgaccactctccaaaatacacctgttcctgtcccaatggatacaat
ctagaggacaatggccgagagtgccacaggatcaacgtgaccacagcagtatcggaggtc
agtgttccccctaaagggacttctgctgcctgggccatccttcccctcttgctcttagca
atggcagcagtaggtggctacttgatgtggcggaattggcaacataagaacatgaaaagc
atgaactttgacaatcctgtgtacttgaagaccactgaagaggacctgtcaatagacatt
ggtagacacagtgcttctgttggacacacgtacccagcaatatcagttgtaagcacagac
gatgatctagcctga
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