Bubalus bubalis (water buffalo): 102403177
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Entry
102403177 CDS
T05912
Symbol
ACIN1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X7
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03013
Nucleocytoplasmic transport
bbub03015
mRNA surveillance pathway
bbub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102403177 (ACIN1)
09122 Translation
03013 Nucleocytoplasmic transport
102403177 (ACIN1)
03015 mRNA surveillance pathway
102403177 (ACIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102403177 (ACIN1)
03041 Spliceosome [BR:
bbub03041
]
102403177 (ACIN1)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102403177 (ACIN1)
Spliceosome [BR:
bbub03041
]
Complex C
Other components
EJC/TREX
102403177 (ACIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
102403177
NCBI-ProteinID:
XP_044781242
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Position
11:complement(81213646..81252123)
Genome browser
AA seq
1273 aa
AA seq
DB search
MCRRKHPSTSGGTRGALSGNRGVDYGSGRGQLGTFEGRWRKLPKMPEAVGTDPSTSRKMA
ELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKGIGEEMSQNSFIKQYLE
KQQELLRQRLEREAREAAELEGKSTSISEEKGESDDEKPRKGERRSSRVRQARAAKLSEC
SQAAEEEEDQETPSRNLRVRADRNLKTEEEEEEEEEEEEEEEEEEDDDEGQKSRDAPVLK
QFKEEGEEIPIVKVEEVTDERPQTIRSQEQEGLERGGRVTRSQEEARRSHLARHQQEKEM
KTASLEEEERERKSSKGLEEKSKSPSPPQLTEDVAKAPVVLQPELTASEEETPPPLLTKE
ASSPPPNTQLQSEEEIEPMEGPAPPVLIQLSPPNADGEARELLLSQHTVQLVGSLSPLSG
RADTKVESPVEKVPEESVLPLVQKSAQAESSAQKGLETESEKSTQPLPLKIEEFTLAKGI
TEESLEQKEGRRASHALLPSHRLKQSADSSSSRSSSSSSSSSRSRSRSPDSSGSQSHSPP
RSKQRDGSGARAHANPHDRSKVGSRSTSESRSRSRSRSRSASSNSRKSLSPGVSRASSTS
YTETKDPSSGQEVAAPPLPQLQVLEPKERTSTPSSIQVRLVSQPEPAAKHVTQRLQPDRG
SPKKCEAEEAEPPAATQPQTSETPTSHLPESERIHHAVEEKEEVTMDTSENRPENEVPEP
PMPIADQVSNDDRPEGNAEDEEKKESLLPKSFKRKISVVSATKGVPAGNSDTEGGQPSRK
RRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEAVVDLHADDSRISEDETERNGDD
GTHDKGLKICRTVTQVVPAEGQENGQREEEEEEKEPEAEAPVPPQVSVEVALPPPVEHEV
KKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKISNIVHISNLVRPFTLGQL
KELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHGVKWPQSNPKFLCADYAE
QDELDYHRGLLVDRPSETKTEEQGMPRPLHPPPPPPAQPPQHPRAEQREQERAVREQWAE
REREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKEKAQEEPPA
KLLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAKEREKRRKEQEEEEQKEREKEAE
RERTRQLEREKRREHSRERDRERERDRERDRGDRDRERDRERERGRERDRRDTKRHSRSR
SRSTPVRDRGGRR
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgtgtagacggaaacacccgagcacttccggaggaacccggggagcgctgagtggtaat
cgaggggttgactatggcagtgggcggggccaactcggtacgttcgaagggcgttggcgg
aaattaccgaagatgcccgaagccgtcgggacggacccgagtacctcacgcaagatggcg
gagctggaggaggtgactctggacgggaagcctcttcaggcgctgcgggtgaccgacctg
aaggccgcattggagcagcgaggcctagccaagagcgggcagaagagtgccctggtcaag
cggctcaaagggattggcgaggaaatgagccagaacagtttcattaagcagtatctggaa
aagcagcaggagctgcttaggcagcgtttggaacgtgaagctcgagaagctgcagaactt
gaaggaaaaagcacctctatttctgaagagaaaggtgaatctgatgatgagaaaccaagg
aaaggagaaagacgatcatccagagtcagacaggcaagagcagctaaactctccgagtgt
agccaggctgcagaggaggaagaggatcaagaaacaccttctagaaatctgagggtcaga
gcagatcgaaatttgaaaacagaggaggaagaagaagaggaggaggaagaggaagaagag
gaggaagaggaggaagatgatgatgagggacaaaaatctagagatgcaccagtcctgaaa
caatttaaggaagagggagaagagatacccatagtaaaagtggaggaggtgacagatgag
agaccccaaactataagatcccaggaacaggaagggttagagagaggagggagagttaca
aggtcccaggaagaggcccgaagaagtcatctagccagacatcagcaggagaaagagatg
aaaacagcttctcttgaagaagaagaaagagaaagaaaatcttcaaaaggcttggaggaa
aaatccaagtctccttcccctcctcaattgactgaagatgtggcgaaggccccggttgtg
ctacaaccagaactaactgccagtgaggaggagactcccccacctttacttaccaaggaa
gcatcttctccaccacctaatacacagctccagagtgaagaagaaatagagcccatggaa
ggcccggcccctcctgtccttattcagttatctcctcctaatgcagatggtgaggccagg
gagctattactatctcagcatactgtgcagttggtgggaagtttgtctcctttgtcaggt
cgtgcagacaccaaagttgaatctccagtagagaaagtgccagaggagagtgtcctgcct
ctagttcagaaaagcgcacaagctgaatcctcagcccagaaaggtcttgaaactgaatca
gaaaaatccactcaaccactccctctaaaaattgaggaattcacactggccaaagggatc
actgaggaatctttggaacagaaagaaggcaggagggcttctcatgcccttcttccaagc
cacagattgaaacagtcagctgactcctcctctagccgatcctcctcatcttcatcctcc
agttctaggtcaagatctcgctctcctgacagttcaggctctcagtctcactcacctcca
agatccaagcagagagatgggtctggggcacgtgctcatgccaaccctcatgataggtcc
aaggtgggctccagatcaacatcagagtccaggtcacgttcccgttctcgttcccggtca
gcatcaagcaacagcagaaaatctttgagccctggagtctctagggccagcagcaccagc
tacactgaaaccaaagacccctcttctggtcaggaggttgcagctccaccattgccacaa
ctgcaggtccttgagccaaaggagaggacttccaccccatcctctatccaagtgaggctt
gtgagccaacctgagccagctgcaaagcatgtgacccagaggttacagcctgatcggggg
agcccaaagaagtgtgaagctgaagaggcagagccaccggctgccacacagccccaaacc
tcagagactccgacctctcacctaccagaatcagaaaggattcatcacgctgttgaggag
aaggaggaagtgaccatggacacaagtgaaaacagacctgaaaatgaggttccagagccc
cccatgcctattgcagaccaagtcagcaatgatgatcgcccagagggcaatgctgaggat
gaggagaagaaagagagcttgctgcccaaatcattcaagaggaagatctccgttgtctca
gctaccaagggggtgccggctggaaacagtgacacggaggggggccagcctagtcggaag
cggcgctggggagccagcacagccaccacccagaagaaaccctccatcagtatcaccacc
gagtcactcaagagcctcatccccgacatcaaacccctggcggggcaggaggctgttgtg
gatcttcatgctgacgactcccgaatctctgaggatgagacagagcgtaatggtgatgat
gggacccatgacaaggggctgaaaatatgccggactgtcactcaggtggtacctgccgag
ggccaggagaatgggcagagggaagaggaggaagaagagaaggagcctgaagcagaagcc
cctgtgcctccccaggtctcagtagaggtggccttgcccccccctgtggaacatgaagtc
aagaaagtgactttaggagataccttaactcgacgttccattagccagcagaagtcagga
gtttccattacgattgatgatccagtccggactgctcaggtgccctccccaccccggggc
aagatcagtaacatcgtccacatctccaatttggttcgtcccttcactttaggccaactg
aaggagttgttgggacgtacaggaactctggtagaagaggctttttggattgacaagatc
aaatctcactgctttgtaacgtactcaacagtagaggaagcagttgccacccgcacagct
ctccatggggtcaaatggccccagtccaaccccaaattcctttgtgctgactatgctgag
caagatgagctggactatcaccgaggcctcttggtggaccgtccctctgaaactaagaca
gaggagcaggggatgccacggccactgcaccccccacccccacccccagcccagccacca
cagcaccccagagcagagcagcgggagcaggagcgggcggtacgggagcagtgggcagaa
cgggaacgggaaatggagcggcgggagcggactcgatccgagcgcgaatgggatcgggac
aaagttcgagaagggccccgttcccgatcccggtcccgtgatcgccgccggaaggaacgc
gcaaagtctaaagaaaagaagagtgagaagaaagagaaagctcaggaggaaccacctgcc
aagctgctggacgaccttttccgcaagaccaaggcagctccctgcatctattggctccca
ctgactgacagccagattgttcagaaggaggcagagcgggctgaacgggccaaggagcgg
gagaagcggcgaaaggagcaagaagaagaagagcagaaggagagggagaaggaggcagag
cgggaacggacccggcagctggagcgagagaagcggcgagaacacagccgagagagggac
agggagagagagagggaccgggagcgggacaggggggatcgagatcgggagcgggacagg
gagcgggaacgaggcagggagagggaccgcagagacaccaagcgccacagcaggagccgg
agcaggagcacacctgtgcgggaccggggcgggcgccgctag
DBGET
integrated database retrieval system
