Bubalus bubalis (water buffalo): 102403183
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Entry
102403183 CDS
T05912
Symbol
SLCO1C1
Name
(RefSeq) solute carrier organic anion transporter family member 1C1 isoform X1
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04081
Hormone signaling
bbub04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
102403183 (SLCO1C1)
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
102403183 (SLCO1C1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bbub02000
]
102403183 (SLCO1C1)
Transporters [BR:
bbub02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
102403183 (SLCO1C1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Kazal_1
Motif
Other DBs
NCBI-GeneID:
102403183
NCBI-ProteinID:
XP_006067684
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All DBs
Position
4:30750221..30833455
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AA seq
712 aa
AA seq
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MDTSSKENIQLFSKNSMQPVGRLSFKTEYPSPKEKPPCCGQLKVFLGALSFVYFAKALAE
GYLKSTITQIERRFDIPSSLVGIIDGSFEIGNLLVIAFVSYFGAKLHRPKIIGAGCLIMG
VGTLLIAMPQFFMEHYKYERYSPVSNSTLSISPCLLDSNNSLPIPVVEKSQSKINNECQI
DASSSMWVYVFLGNLLRGFGETPIQPLGIAYLDDFASQDNAAFYIGCVQTVAIIGPIFGF
LLGSLCAKLYVDIGFVNLDHITITPKDPQWVGAWWLGYLIAGSITLLAAVPFWCLPRTLP
RPRSREDSSSSSEKSKFIMDDHTDYQTPPGEKAKIMEMARDFLPSLKGLFGNPVYFLYLC
ASTVQFNSLFGMVTYKPKYIEQQYGQSASKANFVIGLINIPAVALGIFSGGIVMKKFRIS
IRGAAKLYLGSSVLGYLLFLSLFALGCENSDVAGLTISYQGTKPVSYHERALFSDCNSRC
KCSETKWEPICGENGITYASACLAGCQTTTGSGKTTIFNNCTCVGLAASKSGNSTGMVGR
CQKDNGCAKMFLYFLVIAVITSYTLSVGGIPGYILLLRCIKPQLKSFALGIYTLAVRVLA
GIPSPIYFGVLIDTSCLKWGFKRCGSKGSCRLYDSNAFRHIYLGLTMMLGIMSIFLTTAV
LFTLKKNYVSKHRSFRTKRERTMVSTRIRKEHCTTSDHLLQPNYWPGKETQL
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggacacttcatccaaagaaaatatccagttattcagcaaaaattccatgcaacctgtt
gggaggctttcttttaaaacagaatatccctccccaaaggagaaaccaccctgctgtggt
caactaaaggtgttcttgggtgccttgtctttcgtatactttgccaaagcactggcagaa
ggctatctgaaaagcaccatcactcagatagagagaaggtttgatatcccttcttcactg
gtgggcattattgatggtagttttgaaattgggaatctcttagttatagcatttgttagc
tactttggagccaagcttcacaggccaaaaataattggagctgggtgcctgatcatggga
gttggaacattgctcattgcaatgcctcagttcttcatggagcactacaaatatgaaagg
tattctcctgtctccaattccactctcagcatctctccatgtctcctggattcaaacaat
tcattaccaattccagttgtggaaaaatcacaatccaaaataaataatgaatgtcaaatt
gatgccagctcctccatgtgggtttacgtcttcctgggaaaccttcttcgtggatttgga
gaaactcccattcagcctctaggcattgcctaccttgatgattttgctagccaggacaac
gcagctttctatattggatgtgtgcagacggttgcaattataggaccaatctttggcttc
ctgttaggctcgttatgtgccaaactgtatgttgacattggctttgtaaatctagatcat
ataaccatcaccccaaaggacccacagtgggtaggtgcctggtggcttggctatctcata
gcaggaagcatcactcttctggcagctgtgcctttctggtgtttaccaaggactctacca
agacccaggagcagagaggactccagttcttcctctgagaaatctaagtttattatggat
gatcacacagactaccaaacacctcctggagaaaaagcaaaaatcatggaaatggcaaga
gattttctgccatcactgaagggtctttttggaaatccagtgtacttcttatatttgtgt
gcaagcaccgttcagttcaattctttatttggcatggtaacttacaaaccgaagtacatt
gagcaacagtatgggcagtcagcctctaaggccaactttgttatcgggctcatcaacata
cctgcagtggcccttggaatattctccgggggaatagttatgaaaaaattcagaatcagt
attcgtggtgctgcaaaactttacttgggatcatcggtccttgggtacctcctattcctt
tccctgtttgcactgggctgtgaaaactctgatgtggcaggattaactatctcctaccaa
ggaaccaaacccgtctcttatcatgaacgagctctcttttcagactgcaactcaagatgc
aaatgttcagagacaaaatgggaacccatatgtggtgagaatggaatcacctatgcatcg
gcttgtcttgctggttgtcaaaccaccaccgggagtggaaagactactatatttaataac
tgtacctgtgtggggcttgcagcctcaaaatcaggaaattccacaggcatggtgggcaga
tgtcaaaaagataatggatgtgccaaaatgtttctgtatttcctcgtaattgcagtcatc
acatcctatactttgtctgtaggcgggatacctggatacatattgcttctgaggtgcatt
aaaccacaacttaagtcttttgccctgggtatctacaccttagcagtaagagttcttgca
ggaatcccatctcccatatattttggagttctgattgatacttcatgcctcaagtgggga
tttaaaagatgtggaagtaaaggatcctgtagattgtatgattcaaatgctttcagacat
atatatctgggactaaccatgatgcttggcataatgtccattttcctaactactgcagtg
cttttcactttaaaaaaaaattatgtttcaaaacaccgaagcttcagaaccaagagagaa
agaacaatggtgtcaacaagaatcaggaaggagcattgtactacaagtgatcatttgcta
caacccaactattggccaggcaaggaaacacaactttag
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