Bubalus bubalis (water buffalo): 102403346
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Entry
102403346 CDS
T05912
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03015
mRNA surveillance pathway
bbub05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102403346 (HBS1L)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
102403346 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102403346 (HBS1L)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102403346 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
102403346
NCBI-ProteinID:
XP_006059338
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All DBs
Position
10:30988523..31075677
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AA seq
686 aa
AA seq
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MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSAVEPVEEYDYE
DLKEFSSSLVNHQLSGIDQARLYSCLDHMREVLGDAVPDDILIEAVLKNKFDVQKALSVV
LEQDKVQNLKVRSEGAISTGKIAKGKSIDSQSSQSESEIVPKVTKMTVSGKKQTMGFEVP
RVTAEENGHSFHTPQKGHSSEDTSLVSSDVLESASKSALPSHTIQASEEQSSTPTPVKKS
GKLRQQIDIKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGDVNKRTMHKYEQE
SKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITG
AAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERF
QEITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFK
PPQRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLHD
EPVDWAAAGDHVSLTLVGMDIIKINVGCIFCVPKEPIKVCTRFRARILIFNIEIPITKGF
PVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKD
FKELGRFMLRYSGSTIAAGVVTEIKD
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcatcggaatgtccgaggttataactacgatgaagattttgaagatgatgac
ctctatggccagtctgtagaggatgattattgtatttcgccatcaacagctgctcagttt
atttactcacgacgtgacaaaccttcagctgttgaacccgtagaagaatatgattatgaa
gatttgaaagaattctccagttctcttgtgaatcatcagctaagtggaattgatcaagct
cgtctttattcatgccttgatcacatgagagaggtacttggagatgctgtgccagatgac
atattgattgaagcagttctgaagaacaagtttgatgtgcagaaggctttgtcagtggtt
ctggagcaagataaagtgcagaatttgaaagtcaggagtgagggagcaatatctacagga
aagatagcaaaaggaaaatcaatagattcccagtcatctcaaagtgaatctgaaattgtg
ccaaaagttactaagatgactgtatctggaaagaagcaaactatgggatttgaagtgccc
agagtaactgctgaagaaaatggtcatagtttccatacacctcaaaaaggacattctagt
gaagataccagccttgtttcttctgatgtacttgagagtgcttctaaatcagctcttcca
tcccacaccattcaagcatcagaagagcagagttcaacaccaacaccagtgaaaaagtct
ggcaagctgaggcaacaaatagatatcaaagcggaactggagaagcggcaaggaggaaag
cagctcctcaacctagtggtcattggtcacgttgatgctgggaaaagtactctgatggga
catttgctttatcttctgggtgacgtaaacaaaagaactatgcataagtatgaacaagag
tctaaaaaggctggcaaagcttcgtttgcatatgcatgggtcttggatgagaccggcgaa
gaaagggaaaggggggtaacaatggatgttggtatgacaaagtttgagaccaaaaccaaa
gttattacattaatggatgctccaggccataaggatttcattccaaatatgattacagga
gcagcccaggcagatgtagctgttttagttgtagatgccagcaggggagagtttgaagct
ggatttgagactgggggacaaacacgagagcatggactcttggttcgttctcttggagtg
acccaactcgcagttgcagtcaataaaatggatcaggttaattggcaacaagaaaggttt
caagagattactggaaaacttgggcactttcttaagcaagcaggttttaaggaaagtgat
gtagcttttatccctacaagtggtctcagtggtgaaaatctaatcacaagatctcaatca
agtgaattaacaaaatggtataaaggactatgtttattagaacaaattgattccttcaag
cctcctcaaagatctatagataagccttttagactatgtgtatctgatgttttcaaagat
caaggatctggattttgtgtaactggtaaaattgaagctggttatatccaaactggtgac
cgactcctagcaatgcctcctaatgaaacttgtactgcaaaaggaatcactttgcacgat
gaacctgtcgactgggcggcagcaggagatcatgttagtcttacgttggttggaatggat
atcatcaaaatcaatgttggctgcatattttgtgtccccaaagaacccattaaggtttgc
actcgtttcagagcccgaatcctcatctttaatattgaaattcctatcactaaaggattt
cccgtgctgttacactaccaaaccgtcagtgaacccgctgttattaaaagattgattagt
gtcttaaacaaaagcactggtgaagtcacaaagaaaaagcctaaattgttgaccaaaggc
cagaatgcattagtggagctacagacacaaagaccagtggctcttgagctgtacaaagac
tttaaagagctggggagatttatgctgcgctacagcggttctaccatagctgctggtgta
gtgactgagataaaagattga
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