Bubalus bubalis (water buffalo): 102403793
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Entry
102403793 CDS
T05912
Symbol
SMC1A
Name
(RefSeq) structural maintenance of chromosomes protein 1A isoform X3
KO
K06636
structural maintenance of chromosome 1
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04110
Cell cycle
bbub04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102403793 (SMC1A)
04114 Oocyte meiosis
102403793 (SMC1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbub03036
]
102403793 (SMC1A)
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
102403793 (SMC1A)
Meiosis-specific proteins
Cohesin complex and associated proteins
102403793 (SMC1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_hinge
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
ABC_tran
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
102403793
NCBI-ProteinID:
XP_044793223
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All DBs
Position
X:51984415..52031256
Genome browser
AA seq
1224 aa
AA seq
DB search
MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT
LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK
ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS
QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV
MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY
EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF
CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ
TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG
ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGE
DSVSGSQRTSNIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI
AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN
IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHRYLPPGALRLPAPIWTGCSVGLQHSCHPGTSLHYSSGLDPIFPGPYIFLFVSLLL
CSDLCSCSPPSIPLLPHCINSCAI
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atggggttcctgaagctgattgagatcgagaactttaaatcgtacaagggtcggcagatt
atcggaccatttcagaggttcaccgccatcattggacccaatggctctggtaagtcaaat
ctcatggatgccatcagctttgtgttgggtgagaaaaccagcaacctgcgggtaaagacc
ctaagggacctgatccacggagctcctgtgggcaaaccagcagccaaccgagcctttgtc
agcatggtctactctgaagagggtgctgaggaccgcacgtttgcccgtgtcattgttgga
ggttcctccgagtacaagatcaacaacaaagtggtccagctacatgagtacagtgaggaa
ttagagaagttgggcatacttatcaaagctcgtaacttcctcgtctttcagggtgctgtg
gaatctattgccatgaagaaccccaaagagaggacagctctttttgaagagatcagtcgc
tctggggagctggcccaggaatatgacaagcgaaaaaaggaaatggtaaaagcggaagag
gacacacagtttaattaccatcgcaaaaaaaacattgcagctgaacgcaaggaggccaaa
caggaaaaagaagaggctgaccgctaccagcgcctgaaggatgaggtggtgcgagctcag
gtacagttgcagcttttcaaactttatcataacgaagtggaaattgagaagctcaacaaa
gaactggcctctaagaacaaggagatagagaaggacaaaaagcggatggacaaggtagag
gatgagctgaaggagaagaagaaggagctgggcaaaatgatgcgggaacaacagcagatt
gagaaggagatcaaggagaaggactcagagctgaaccagaagcggcctcagtacatcaaa
gccaaggaaaatacttcccacaaaatcaagaagttggaagcagccaaaaagtcactacag
aatgctcagaagcattataagaagcgtaaaggtgacatggatgagctggaaaaggagatg
ctgtcagtggagaaagctcggcaggagtttgaggaacggatggaagaggaaagtcagagt
cagggcagagatttgaccttggaggagaatcaggtgaagaaatatcaccggttgaaagaa
gaagccagcaagagagcagctaccctggcccaggagctggagaagttcaatcgagaccag
aaggctgaccaggaccggctggatctggaagaacggaagaaagtagagacagaggccaag
atcaagcaaaagctgcgggagattgaagagaatcagaaacggattgagaaactagaggaa
tacatcacaaccagcaagcagtctctagaggaacagaagaaactagagggggagctgaca
gaggaggtggagatggccaagcggcgtattgatgagattaataaggagctgaaccaggta
atggagcagctgggggatgcccgcattgaccgccaggagagcagccgccaacagcgaaag
gcagaaattatggaaagcatcaagcgcctgtaccctggttctgtgtacggccgcctcatt
gacctctgccagcccacacaaaagaagtatcagattgcagtaaccaaggttttgggcaag
aacatggatgctattattgtggactcagagaagacaggccgggactgcattcagtatatc
aaggagcagcggggggagcctgagaccttcttgcctcttgattacctggaggtaaaacct
acagatgagaaactccgggagctgaagggggcaaaactggtgattgatgtgattcgctat
gagccacctcacatcaaaaaggccctgcagtatgcttgtggcaatgcccttgtctgtgac
aatgtggaggatgcccgccgcattgcctttggaggccaccagcgccacaagacagtggcg
ctggatgggaccctgttccagaagtcaggggtgatctctggcggggccagtgacctgaag
gccaaggcccgacgctgggatgagaaagcagtagacaagttgaaagagaaaaaggagcgg
ttgacagaagagctgaaggagcagatgaaggcaaagcgaaaagaggcagaactacgtcag
gtgcagtctcaggcccacggactgcagatgcggctcaagtactcacagagtgacctagaa
cagaccaagacacggcatctggcccttaatctgcaggaaaagtccaagctggagagtgag
ctagccaactttgggcctcgaatcaatgatatcaagaggatcatccagagccgagagagg
gaaatgaaagacttaaaggagaagatgaaccaggtagaggatgaagtatttgaagagttt
tgtcgggagattggtgtgcgcaatatccgggagtttgaggaagagaaggtgaagcggcag
aatgaaattgccaagaagcgtttggagtttgagaatcagaagactcgtttgggtatccag
ttggattttgaaaagaaccaactgaaggaggaccaggataaagtgcacatgtgggagcag
acagtgaaaaaagatgaaaatgagatagaaaagctcaagaaggaggagcaaagacatatg
aagatcatagatgagaccatggcccagctacaagacctgaagaaccagcacctggccaag
aagtcagaggtgaatgacaagaaccacgagatggaggagattcgtaagaaactggggggc
gccaacaaggaaatgacccatttacagaaggaagtgacagccattgagaccaagcttgaa
cagaagcgcagtgaccgccacaacctgctacaggcctgcaagatgcaggacatcaagttg
ccactgtctaagggcaccatggatgatatcagtcaggaagagggtagctcccaaggggag
gattcagtgagtggctcccaacggacttccaatatctatgcacgagaggccctcattgag
attgactacggtgacctgtgtgaagatctgaaggatgcccaggctgaggaggagatcaag
caggagatgaacacgctgcagcagaagctgaatgagcagcagagtgtgctccagcgtatt
gctgcccccaacatgaaggccatggaaaagctggaaagtgtccgagacaagttccaagag
acctcagacgaatttgaggcagcccgaaagcgagccaagaaggccaagcaggcatttgaa
cagatcaagaaggaacgctttgaccgcttcaatgcctgttttgaatcggtggccaccaac
attgatgagatctacaaggccctgtctcgtaacagcagtgctcaggcgttcctgggccct
gagaaccctgaggagccctacttggatggcataaactacaactgtgtggctcctggcaaa
cgcttccgacccatggacaacttgtcagggggggagaaaacagttgcagctctggccctg
ctctttgccatccacagataccttcctcctggagccctccgtcttcctgctccaatttgg
actggttgctctgtaggcctgcagcacagctgtcatcctgggacgtcccttcattactct
tctgggttggacccaatctttcctggaccttatatcttcctctttgttagtttactcctt
tgtagtgacctttgtagttgttctccaccatccattcctctcctcccccattgtattaat
agctgtgcaatttga
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