Bubalus bubalis (water buffalo): 102403804
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Entry
102403804 CDS
T05912
Symbol
RTF1
Name
(RefSeq) RNA polymerase-associated protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbub03021
]
102403804 (RTF1)
Transcription machinery [BR:
bbub03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
102403804 (RTF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
102403804
NCBI-ProteinID:
XP_025151666
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All DBs
Position
11:complement(66380080..66427288)
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AA seq
714 aa
AA seq
DB search
MRGRLCVGRTAAAAAAATAAVAVPLAGGQEGSPGGVRRGSRGTTMVKKRKGRVVIDSDTE
DSGSDENLDQELLSLAKRKRSDSEEKEPPVSQPAASSDSETSNSDDEWTFGSNKNKKKGK
ARKIEKKGTMKKQANKTASSGSSDKDSSAESSAPEEGEVSDSDSNSSSSSSDSDSSSEDE
EFHDGYGEDLMGDEEDRARLEQMTEKEREQELFNRIEKREVLKKRFEIRKKLKTAKKKEK
KEKKKKQEEEQEKKKLTQIQESQVTSHNKERRSKRDEKLDKKSQAMEELKAEREKRKNRT
AELLAKKQPLKTSEVYSDDEEEEEDDKSSEKSDRSSRTTSSDEEEEKEEIPPKSQPVSLP
EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEITGVVETAKVYQ
LGGTRTNKGLQLRHGSDQRVFRLEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEINKKE
LSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAMAEDLGDQDKAKQIQ
DQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVAESHNMKNQQMDPFTR
RQCKPTIVSNSRDPAVQAAILAQLNAKYGSGVLPDAPKEMSKGQGKDKDLNSKSASDLSE
DLFKVHDFDVKIDLQVPSSESKALAITSKAPPAKDGAPRRSLNLEDYKKRRGLI
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggtcgcctttgtgtgggtcgaacagcagcagcggcggcggcggcgacggcggca
gtggcggtcccactggcaggcgggcaagaggggagtccgggcggcgtccggcgtgggagc
cgggggaccacgatggtaaagaagcggaaaggccgcgtcgtgattgactcagacacggag
gacagcggcagcgacgagaacctggatcaggaactcttgtccctggcaaagcggaagcga
agtgactctgaagagaaggagccgcccgtgagtcagcctgctgcctcctcagactcagag
acgtctaacagcgatgacgagtggacttttgggagcaataaaaataagaagaaaggaaaa
gccagaaaaatagagaagaaaggaaccatgaagaaacaggcaaataaaactgcttcctca
ggcagttcagacaaagacagttcagcggagagctcagctcctgaggaaggtgaggtgtca
gattctgacagcaacagctcctcctccagttcagattcagactcttcctcagaagatgag
gaattccatgatggctacggagaagacctcatgggagatgaggaagacagggcccgtctg
gaacagatgacagaaaaggagagagaacaagaactgttcaaccgcatagagaagagggag
gtgttgaaaaaaagatttgaaatcaggaaaaaactgaaaacagccaaaaagaaagaaaag
aaagaaaaaaagaaaaagcaagaagaagagcaggaaaagaaaaaactgacacagattcaa
gaatctcaggtaacatcccacaacaaggaacgacgttccaaacgggatgagaaactagat
aagaaatctcaagccatggaggaactaaaggcagagcgagaaaaacggaagaacagaaca
gctgagctcctcgccaagaaacagccattaaaaactagtgaggtgtactctgatgacgag
gaggaggaggaggatgacaagtccagtgaaaagtcagaccggtcatcccgaacaacatca
tccgatgaggaagaggaaaaagaagagatccctccaaaatcacaaccggtctccttacca
gaggaattgaatcgtgttcgattatcacggcataagctggaacgttggtgtcatatgccc
ttcttcgctaaaacagtcacaggatgctttgtacggattggcattggaaaccacaacagc
aaaccagtttaccgggttgctgagatcacgggtgttgtggaaaccgccaaagtttaccag
cttggtggcaccagaacaaacaaagggctacagctacggcacggcagtgaccagcgagtg
ttccgcctagagtttgtctcaaaccaagagttcactgagagcgaattcatgaagtggaaa
gaagcgatgttctctgctggcatgcagttgcccactctagatgaaatcaataagaaggaa
ttatctattaaagaagctcttaattataaattcaatgaccaggacattgaagagattgta
aaagagaaagaaagattcaggaaagctccacccaactatgctatgaagaaaacgcagctt
ctgaaggaaaaggccatggctgaggacctgggggatcaggacaaggccaaacaaatccaa
gaccagctgaacgagctggaggagcgagcagaggccttggaccgccagcggaccaagaac
atatctgctatcagttacatcaaccagcggaaccgggagtggaacattgtggagtctgag
aaggcccttgtggctgaaagtcacaacatgaaaaaccaacagatggatccctttaccagg
cgacagtgtaaacctaccatcgtttctaattccagagacccagctgttcaagctgccata
ttggcccagctgaacgcaaaatacggttctggagtgttaccagatgctccaaaggaaatg
agcaagggtcagggaaaggataaagatttgaattctaaatcagccagtgatctctcagaa
gacttgttcaaagtacatgacttcgacgtgaagattgatttacaagtccccagctcagaa
tcaaaggccttggccatcacctccaaggctccgccagccaaggatggagctccgaggaga
tctctgaacttggaagactacaaaaaacgacgagggcttatctga
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