Bubalus bubalis (water buffalo): 102404076
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Entry
102404076 CDS
T05912
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03030
DNA replication
bbub03410
Base excision repair
bbub03420
Nucleotide excision repair
bbub03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102404076 (RFC5)
03410 Base excision repair
102404076 (RFC5)
03420 Nucleotide excision repair
102404076 (RFC5)
03430 Mismatch repair
102404076 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbub03032
]
102404076 (RFC5)
03036 Chromosome and associated proteins [BR:
bbub03036
]
102404076 (RFC5)
03400 DNA repair and recombination proteins [BR:
bbub03400
]
102404076 (RFC5)
DNA replication proteins [BR:
bbub03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
102404076 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
102404076 (RFC5)
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
102404076 (RFC5)
DNA repair and recombination proteins [BR:
bbub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
102404076 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
102404076 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_24
AAA_16
AAA_11
AAA_22
AAA_assoc_2
RuvB_N
AAA_14
DUF815
DEAD
ResIII
AAA_5
ATPase_2
AAA_19
AAA_30
PhoH
TIP49
nSTAND3
TniB
AAA_7
DNAX_ATPase_lid
Mg_chelatase
Thioredoxin_6
bpMoxR
NPHP3_N
AAA_25
AAA_3
ABC_tran
AAA_28
Motif
Other DBs
NCBI-GeneID:
102404076
NCBI-ProteinID:
XP_006074293
LinkDB
All DBs
Position
17:15467212..15477961
Genome browser
AA seq
339 aa
AA seq
DB search
METSAHKQQQPEAAKIRNLPWVEKYRPQTLDDLISHQDILSTIQKFISEDRLPHLLLYGP
PGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKL
VILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPEL
MVPRLEHVVEEEKVDISEDGMKALITLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGH
PLKSDIANILDWMLNQDFTTAYRNIMELKTLKGLALHDILTEIHLFVHRVDFPSSVRIHL
LTKMADIEYRLSVGTSEKIQLSSLIAAFQVTRDLIVTEA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggaaacctcagcgcacaagcagcagcagcctgaggcggccaagatcagaaacctgccc
tgggttgaaaaataccggccacagacactggatgatctcatttctcatcaggacatcttg
agtactattcagaagtttatcagtgaggaccgcctgccgcacctccttctgtatggtcct
ccagggacaggaaagacatccaccatcctggcctgtgctaaacagctgtacaaagataag
gaatttggctccatggtcttggagctgaatgcttcagatgaccgaggaatagatatcgtt
cggggaccaatcctgagctttgctagcacaaggacaatatttaagaaaggctttaaactg
gtaatcttggatgaggccgatgccatgactcaggatgcccagaacgccctgcggagagtg
attgagaagtttactgaaaataccagattttgcctcatctgtaactatctgtcaaagatc
atccccgccttgcagtcccggtgtacaagattccgattcggaccactgactcccgaactc
atggttccccgcctggaacatgtcgtagaagaagagaaagttgatataagtgaagatggg
atgaaagcgctcataactctttccagtggagacatgcgaagggctttgaacatcttacag
agcaccaacatggcctttgggaaggtcacagaggagaccgtctacacctgcacagggcat
ccgctcaagtcagacatcgccaacattctggactggatgttgaatcaagacttcaccacg
gcctacaggaatatcatggagttaaaaactctgaaggggttggcgttacacgacatcctg
acggagatacacctgttcgtgcacagagttgactttccatcttcagttcgaatacattta
ttgaccaaaatggcagacattgagtacagactttctgttggcaccagtgagaagattcag
ctgagttccctcattgccgcttttcaagtcaccagagacctgattgtcactgaggcctag
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