Bubalus bubalis (water buffalo): 102404196
Help
Entry
102404196 CDS
T05912
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04080
Neuroactive ligand-receptor interaction
bbub04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102404196 (TRPV1)
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
102404196 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bbub04040
]
102404196 (TRPV1)
Ion channels [BR:
bbub04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102404196 (TRPV1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
102404196
NCBI-ProteinID:
XP_006079769
EnsemblRapid:
ENSBBUG00015006194
LinkDB
All DBs
Position
3:38792107..38815044
Genome browser
AA seq
843 aa
AA seq
DB search
MENLARMKKWGSSESRESQDLPQEDSCSDPLDGDPNYRPAPSKPHSFPTAKSRSRLFGKG
DSEDTSLMDCSYEEGQLASCPAITISPVVIIQRPGDGPTCVRQLSQDSAATENLKLYDRR
KIFEAVAQNNCEELESLLLFLQKSKKHLMDSEFKDPETGKTCLLKAMLNLHNGQNDTIPL
LLEIARQTDSLKELVNASYTDSYYKGQTALHIAIERRNMALVTLLVENGADVQAAANGDF
FKKTKGRPGFYFGELPLSLAACTNQLGIVRFLLQNSWQPADISARDSVGNTVLHALVEVA
DNTADNTKFVTSMYNEILILGAKIHPTLKLEELTNKKGLTPLALAARSGKIGVLAYILQR
EIQEPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEVIAYSSSETPNRHDMLLV
EPLNRLLQDKWDRFVKRIFYFNFFVYCLYMIIFTTVAYYRPAGGRPPFKPKHTVGDYFRI
TGEIISVAGGIYFFSRGIQYFLQRRPSLKTLFVDSYSEMLFFMQSLFMLATVVLYFCHRK
EYVASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYLVFLFGFSTAV
VTLIEDERNDSVSVESSPHRWRGHGCRSADSYNSLYSTCLELFKFTIGMGDLEFTENYDF
KAVFVILLLAYVILTYILLLNMLIALMGETVNKIAQESKNIWKLQRAITILDTEKSFLKC
MRKAFRSGKLLQVGYTPDGKDDYRWCFRVDEVNWTTWNTNVGIINEDPGNCEGIKRTLSF
SLRSSRVAGRNWKNFALVPLLRDASTRERHPAQPEEVHLRHFTGSLKPEDAEIINDSAAL
GEK
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggagaatctggcacggatgaagaaatgggggagctcagaatcacgggaatctcaggac
ctgcctcaagaggactcctgctcagaccccctagatggagaccctaactacaggccagct
ccatccaagccccacagcttccccacagccaagagccgcagccgactctttggcaagggt
gactcagaggacacatccctcatggactgctcttatgaggaaggccagctggcatcctgc
ccagccatcaccatcagccctgtagtcatcatccagaggcctggggatggccccacctgt
gtcaggcagctgtcccaggactctgctgccactgagaacctcaagctctacgatcgcagg
aagatctttgaagcagttgctcagaataactgtgaggagctggagagcctgctgctcttc
ctgcagaagagcaagaagcatctcatggacagcgagttcaaagacccagagacagggaag
acctgcctgctgaaagccatgctcaaccttcacaacgggcagaacgacaccatccccctg
ctcctggagatagcccggcagacggacagcctgaaggagctcgtcaacgccagctacacg
gacagctactacaagggccagacagcgctgcacatagccatcgagaggcggaacatggcg
ctggtgaccctgctggtggagaacggggccgatgtccaggctgcagccaacggggacttc
tttaagaaaaccaaagggcgacctggcttctattttggtgagctgcccctctccctggcc
gcgtgcaccaaccagctgggcatcgtgaggttcctgctgcagaactcctggcagccagct
gacatcagtgccagggactcagtgggcaacacggttctgcacgcgctggtggaggtggcc
gacaacacggctgacaacaccaagttcgtgacgagcatgtacaatgagattctgatcctg
ggggccaaaatccaccctacactgaagctggaggagctcaccaacaagaaggggctgacg
ccgctggctctggccgcccggagtgggaagatcggggtcttggcttatattcttcagagg
gagatccaggagcctgagtgtaggcacctgtccagaaagttcaccgagtgggcttacggg
cctgtgcactcctcactctacgacctgtcctgtatcgacacctgtgagaagaactcggtg
ctggaggtgatcgcctacagtagcagcgagacccctaatcgccatgacatgctcttggtg
gagccgctgaaccgcctcctgcaggacaagtgggacagattcgtcaagcgcatcttctac
ttcaacttcttcgtctactgcttgtatatgatcatcttcaccacggtcgcctactacaga
cctgcgggaggccggcctccctttaagccaaaacacactgtaggggactatttccgaatc
actggagagattatttctgtggcaggtggtatctactttttttcccgagggattcagtat
ttcctgcaaaggcggccgtcgctgaagaccttgtttgtggacagctatagtgagatgctt
ttcttcatgcagtcgctgttcatgctggcgaccgtggtgttgtacttctgccaccgcaag
gagtacgtggcctccatggtgttctccctggccatgggctggaccaacatgctctactac
acccgcggcttccagcagatgggcatctatgccgtcatgatcgagaagatgatcctcaga
gacctgtgtcgcttcatgtttgtgtacctcgtgttcctgttcgggttttccacagcggtg
gtgacgctgattgaggatgaaaggaatgactctgtgtcggtcgagtcgtcgccacacagg
tggcgagggcacggctgccggtcggccgacagctacaacagcctgtactccacgtgtctg
gagctgttcaagttcaccatcggcatgggggacctggaattcaccgagaactatgacttc
aaggctgtctttgtcatcctgttgctggcctacgtgattctcacgtacatcctcctgctc
aacatgctgatcgccctcatgggcgagacggtcaacaagattgcgcaggagagcaagaac
atctggaagctgcagagagccatcaccatcctagacacggagaagagcttcctcaagtgt
atgaggaaggcctttcgctcaggcaagctgctgcaggtggggtacacacctgatggcaag
gacgactacaggtggtgtttcagggtggacgaggtgaactggaccacctggaacaccaac
gtgggcatcatcaacgaagacccgggcaactgtgagggcatcaagcgcaccctgagcttc
tccctgcggtcaagccgagttgcagggaggaactggaagaactttgccctggttcccctc
ttaagagatgcaagtactcgagaaaggcaccctgcccagcctgaagaagttcacctgagg
cacttcacagggtccctcaagcccgaagatgctgagatcatcaacgattctgcggcttta
ggggagaagtga
DBGET
integrated database retrieval system
