Bubalus bubalis (water buffalo): 102404313
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Entry
102404313 CDS
T05912
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04082
Neuroactive ligand signaling
bbub04721
Synaptic vesicle cycle
bbub04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
102404313 (SLC6A4)
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
102404313 (SLC6A4)
04721 Synaptic vesicle cycle
102404313 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bbub02000
]
102404313 (SLC6A4)
Transporters [BR:
bbub02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
102404313 (SLC6A4)
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GFIT
Motif
Pfam:
SNF
5HT_transport_N
DUF8005
Motif
Other DBs
NCBI-GeneID:
102404313
NCBI-ProteinID:
XP_025136725
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Position
3:41789739..41822823
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AA seq
630 aa
AA seq
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METTPLNSQKELSAYKDGEDCQENGVLQKGVPAPGDKTESGQISNGYSAVPNPGAGDDTQ
HSIPAATTALVAEVHPAERETWGKKVDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWTKICPIFKGIGCAICLIAFYIASYYNTIM
AWALYYLISSFTEQLPWTSCENSWNTGNCTNYFSEDNITWMLHSTSPAEEFYTRQVLQIH
RSKGLQDLGGLSWQLVLCIMFIFTVIYFSIWKGVKTSGKVVWVTATFPYIILLILLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFHNNCYQD
ALVTSAVNCMTSFVSGFVIFTVLGYMAEMRKEDVSEVARDAGPSLLFITYAEAIANMPAS
TFFAIVFFLMLITLGLDSTFAGLEGVITAVLDEFPHVWAKRREWFVLGVVITCFFGSLVT
LTFGGAYVVKLLEEFATGPAVLTVALIEAVAVFWFYGINQFCSDVKEMLGFSPGWFWKIC
WVAISPLFLLFIICSFLMSPPQLRLFQYDYPRWSIILGYCIGTSSFICIPTYITYRLIVT
PGTLKERIIKGITPETPTEIPCGDIRLNAV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacccccttaaattcccagaaggagctatcagcgtataaggatggagaagat
tgtcaggaaaatggggttctacagaagggtgtccccgcccctggggataagacagagtcc
ggccagatctccaacgggtactcagcggttccgaaccctggcgcaggagacgacactcag
cactccatcccagctgccaccactgccctagtggctgaggttcatccagcagagcgggag
acctggggcaagaaggtggatttcctcctctctgtcatcggctatgctgtggacctgggc
aacgtctggcgctttccctacatttgttaccagaatggagggggggcgttcctccttccc
tacactatcatggccatttttggggggatcccgctcttctacatggagcttgcactgggg
cagtaccatcgaaatggatgcatttcgatatggacgaaaatctgcccaattttcaaaggg
ataggttgcgccatctgcctcatcgccttctacatcgcctcctactacaacaccatcatg
gcctgggccctctactacctcatctcctccttcacggagcaactgccctggaccagctgt
gagaactcctggaacactggtaactgcaccaactacttctccgaggataacatcacctgg
atgctccactcaacgtcccctgcagaagaattttacacgcggcaggtcctgcagatccac
cggtcgaaggggctccaggacctggggggcctcagttggcagcttgtcctgtgcatcatg
ttcatcttcactgttatctactttagcatctggaaaggcgtcaaaacatctggcaaggtg
gtttgggtgacagccaccttcccttacatcattcttttgatcctgctggtgaggggggcc
accctccctggagcctggaggggagttctcttctatttgaaacccaactggcagaaactc
ctagagacgggggtgtgggtggatgcggccgcccagatcttcttctctctcggccctggc
tttggggtcctactggcttttgcgagctacaacaaattccacaacaactgttaccaagac
gccctggtgaccagtgcggtgaattgcatgacgagcttcgtttcaggatttgtcatcttc
acggtgctggggtatatggctgagatgaggaaagaagatgtgtctgaggtggccagagat
gcaggccccagcctcctgttcatcacatacgcagaagccatagccaacatgccagcatcc
acattctttgccatcgtcttcttcctgatgttaatcaccctgggcttggacagcacgttt
gcaggcttggagggggtgatcacagctgtgctggatgagtttccacatgtctgggccaag
cgccgggagtggtttgtgcttggagtggtcattacctgcttctttggatccctggtcacc
ttgactttcggtggggcctacgtggtgaagctgttggaggagttcgccacgggacctgca
gtgctcactgtggccctgattgaagctgttgctgtgttttggttctacggcatcaatcag
ttctgcagtgatgtgaaggaaatgcttggtttcagccctggatggttctggaagatctgc
tgggtagccatcagtcctctgtttctcctgttcatcatctgcagttttttgatgagccca
ccacagctacgacttttccagtatgattatcctcggtggagcatcatcctgggttactgc
ataggaacctcatctttcatctgcatccccacatatataacctatcggctgattgtcact
ccagggacacttaaggagcgtattattaaaggtatcaccccagaaacaccgacagaaatt
ccctgtggggacatccgcctgaatgctgtgtaa
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