Bubalus bubalis (water buffalo): 102404350
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Entry
102404350 CDS
T05912
Symbol
DCAF13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bbub03009
]
102404350 (DCAF13)
04121 Ubiquitin system [BR:
bbub04121
]
102404350 (DCAF13)
Ribosome biogenesis [BR:
bbub03009
]
Eukaryotic type
90S particles
Other 90S particles
102404350 (DCAF13)
Ubiquitin system [BR:
bbub04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
102404350 (DCAF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
WD40_RFWD3
eIF2A
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
MIOS_WD40
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_NUP159_NUP214
KNTC1_N
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
102404350
NCBI-ProteinID:
XP_006065140
LinkDB
All DBs
Position
15:21200121..21227802
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AA seq
445 aa
AA seq
DB search
MKVKMLSRNPDHYVRETKLDLQRVPRNYDPTLHPFEVPREYIRALNATKLERVFAKPFLA
SLDGHRDGVNCLAKNPKSLATVLSGACDGEVKIWNLTKRKCIRTIQAHEGFVRGICTRFC
GTSFFSVGDDKTVKQWKMDGPSCGEEEEPLHTILGKTVYTGIDHHWREAVFATCGQQVDI
WDEQRTSPICSMTWGFDSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKKVILDMR
TNTICWNPMEAFIFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTGREFVSA
SFDKSIRIFPVDKSRSREVYHTKRMQHVICVKWTADSKYIMCGSDEMNIRLWKANASEKL
GVLTSREKAATDYNQKLKEKFQHHPHIKRISRHRHLPKSIYSQIQEQRIMKEARRRKELN
RIKHSKPGSVQMVSEKNKHVVAVVK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaagatgctgagtcggaaccccgaccactatgtccgcgaaaccaaattggac
ttacagcgagttccaagaaactatgatcctaccttacatccttttgaggtcccacgagaa
tatataagagctttaaatgctaccaaactggaacgggtatttgcaaaaccattccttgcc
tccctggatggtcaccgagatggagtcaattgcttggcaaagaatccaaagagcctggct
actgtcctttctggggcatgtgatggagaggttaaaatttggaacttgaccaaacgaaaa
tgtattcgtacgatacaagcacatgaaggttttgtacgaggaatatgtacccgcttttgt
gggacatctttttttagtgttggtgatgacaaaactgtgaagcaatggaaaatggacggg
ccaagctgtggagaggaggaggagccattgcatacaatattaggaaagacagtgtataca
ggaattgatcatcactggagagaagctgtttttgccacatgtggacagcaagtagacatt
tgggatgaacaaagaaccagtcctatatgttcaatgacttggggatttgacagtataagc
agtgttaaatttaacccaattgagacatttctcttgggaagttgtgcttctgacaggaat
atagtactatatgatatgagacaagctactcctctgaaaaaggtcatcttagatatgaga
acaaatacaatttgctggaaccctatggaagcattcatttttactgcagcaaacgaggat
tacaacttgtatactttcgatatgcgtgccctggacactcctgtaatggtgcatatggat
catgtatctgcagtgcttgatgtggattactctcccactgggagagagtttgtgtcagct
agttttgataaatctattcgaatctttcctgtggacaaaagtagaagcagggaagtctat
cacacaaagagaatgcagcatgttatctgtgtaaaatggactgctgacagcaagtacatt
atgtgtggatctgatgaaatgaacattcgtctatggaaagctaatgcttctgaaaagttg
ggtgtgcttacatcacgagaaaaagcagccacagattataaccagaagttaaaggagaaa
tttcaacatcatcctcatataaaacgtatctctcgtcaccgacatctaccaaaatctatc
tacagccagattcaggaacagcgcatcatgaaagaagctcgtcgacgaaaggaactgaat
cgtatcaaacatagcaagcctggatctgtgcagatggtgtcagagaagaataaacacgta
gtggcagttgtgaaataa
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