Bubalus bubalis (water buffalo): 102404361
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Entry
102404361 CDS
T05912
Symbol
ZEB1
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub05202
Transcriptional misregulation in cancer
bbub05206
MicroRNAs in cancer
bbub05215
Prostate cancer
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
102404361 (ZEB1)
05206 MicroRNAs in cancer
102404361 (ZEB1)
09162 Cancer: specific types
05215 Prostate cancer
102404361 (ZEB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbub03000
]
102404361 (ZEB1)
Transcription factors [BR:
bbub03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
102404361 (ZEB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_15
zf-C2H2_6
Zf-C2H2_ZNF451_C
zf-C2HE
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
102404361
NCBI-ProteinID:
XP_025120081
LinkDB
All DBs
Position
14:49872542..50070955
Genome browser
AA seq
1123 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYNTVVETNSDSDDEDKLHIVEEESITDAADCEGGVPDE
DLPSDQTVLPGSSAREGSAKSCWEDDAGKEGQEILGPEARADEVGCAVKDDECDSDAENE
QNHDPNVEEFLQQQDTAVIYPEAPEDDQRQGTPEASGHDENGTPDAFSQLLTCPYCDRGY
KRFTSLKEHIKYRHEKNEDNFSCSLCSYTFAYRTQLERHMTSHKSGREQRHVTQSGGNRK
FKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCISLMPVN
GRPRTGLKTSQCSSPSLSASPGSPTRPQMRQKIENKPLQEQLPVNQIKTEPVDYEFKPIV
VASGINCSAPLQNGVFSGGGPLQATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVA
VDGNVIRQVLENNQANLASKEQETINASSIQQGGHSVISAISLPLVDQDGTTKIIINYSL
EQPSQLQVVPQNLKKETPVPTNNCKSEKLPEDLTVKSEKDKSFEGGGNDSTCLLCDDCPG
DLNALPELKHYDLKQPAQPPPPPTPEAAKPEASAPSGSGDGSLSPSQPPLKNLLSLLKAY
YALNAQPSAEELSKIADSVNLPLDVVKKWFEKMQAGQISVQSSEPSSPEPGKANTPAKSD
DQPQAADADEAQDGTGNCQSPLKRASSPVLPGGSAVNGSRSSASSPSPLNLSSSRSAQGY
SYPTEGAQEEPQVEPLDLSLPKQQGELLERPTITSVYQNSVYSVQEEPLNLSCAKKEPQK
DSCVTDSEPVVNVIPPSANPINIAIPTVTAQLPTIVAITDQNSVPCLRALAANKQTILIP
QVAYTYSTAVSPAVQETPLKVIQPSGNQDERQDTSSEGVSNVEDQNDSDSTPPKKKMRKT
ENGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHLIEHMRLHSGEKP
YQCDKCGKRFSHSGSYSQHMNHRYSYCKREAEEREPPEPGAAGPGVPPEQHAGQGDSDER
ESSTREEDEDSEKEEEEEEEERELEELEEEKGSGVARGEEEVEDGEEEMDDEEDEDEEAE
DEGESAETEGVGQGAGAGGQAHSLEHKVSEGSEQVSEEKTNEA
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgcggcgcaataacgtt
acaaattataatactgtggtagaaacaaactcagattcagacgatgaagacaaactccac
attgtggaagaagaaagcatcacagatgcagccgactgtgaaggcggcgtgccagacgaa
gacctgccctcagaccagacagtgttgcccgggagcagcgcgcgagaagggagcgcaaag
agctgctgggaggacgatgcaggaaaggaaggacaagaaatcctggggccggaagctcgg
gcagatgaagtgggatgtgcagtaaaagatgatgaatgcgactcagatgcagaaaatgaa
caaaaccatgatcctaacgttgaagagttcctgcaacaacaagacactgcagtcatctac
cccgaggcacccgaggatgaccagaggcagggcacgccggaggccagcgggcatgatgaa
aacggaacaccagatgcattttcccagttgctcacctgtccgtactgtgacagaggatat
aaacgctttacctctctgaaagaacacattaagtatcgccacgagaagaatgaagacaac
ttcagctgctccctgtgcagttacacgtttgcatacagaacccagctcgagcgccacatg
acgtcccacaaatcaggacgagagcagagacatgtgacgcagtctgggggtaatcgtaaa
ttcaagtgcactgaatgtggaaaagctttcaaatacaaacaccatctaaaagagcactta
agaatccacagtggagagaagccatatgaatgcccaaactgcaagaaacgtttttcccat
tctggttcctacagctcacacataagcagtaagaaatgtatcagcctgatgcctgtgaac
gggcgaccaagaacagggctcaagacctcgcagtgctcctcaccctcgctctcggcctct
ccaggcagccccacgcgaccacagatgcggcagaagatagagaacaagcccctgcaggag
cagctccctgtaaaccagattaaaactgaacctgtggattatgagttcaaacccatagtg
gttgcttcaggaatcaactgttcagcccctctacagaacggggttttcagtggtggtggc
cccttacaggcaaccagttctcctcagggtgtggtgcaggccgtcgttctgccaacggtg
ggtttggtgtcccccatcagtatcaatttaagtgatattcagaatgtacttaaagtggcg
gtagatggtaacgtcatcaggcaagttttggagaataatcaagccaatcttgcatccaaa
gaacaagaaacaatcaatgcttcatccatccagcagggcggccattctgttatttcagcc
atcagtcttcctctggttgatcaagatggaacaaccaaaatcatcattaactacagtctt
gaacaacctagccaacttcaagttgttcctcagaatttaaaaaaagaaaccccagtcccc
accaacaattgcaaaagcgaaaagttaccagaagatcttactgtcaagtctgagaaggac
aaaagctttgaagggggagggaatgacagcacgtgcctcctgtgtgacgactgtcccggg
gacctcaatgcacttccggagctaaagcactatgacctgaagcagcccgcccagccccct
ccgccccccaccccagaagctgccaagcccgaggcctccgctccatcggggtccggagat
ggcagtttgtctcccagtcagccacctttaaagaacctcttgtctcttctgaaagcgtat
tatgctttgaacgcacaaccaagtgcagaagagctctcaaaaattgctgattccgtgaac
ctaccactggatgtagtgaaaaagtggtttgaaaagatgcaagcgggacagatctcagtg
cagtcttctgaaccatcttccccggaaccaggcaaagccaacacccctgccaagagcgac
gatcagcctcaggctgcagatgcagatgaagcccaggacggcacagggaactgccagagc
cctctgaagagagctagctctcccgtcttaccagggggctcggctgtcaatggttccaga
agcagcgcctcctccccttcccccttgaacctctcttcctccagaagcgcacagggttac
tcatacccgacagaaggggcgcaggaagagccgcaggtcgaacctcttgatctttcacta
ccaaagcagcagggcgagttattggaaaggccaactatcactagtgtttaccagaacagt
gtttattctgtccaggaagaacccttgaacttgtcttgtgcaaaaaaggagccacaaaag
gacagttgtgttacagactcagaaccagttgtaaatgtaatcccaccaagtgccaacccc
ataaatattgctatacctaccgtcactgcccagttacccacgatcgtggccatcactgac
cagaacagtgttccatgcttgcgagcactggctgccaacaagcagaccatcctgatcccc
caggtcgcctacacatactcgactgcagtcagcccggcggtccaggaaacacccttgaag
gtgatccagcccagtggaaatcaggatgaaaggcaagacactagctcagaaggcgtatcc
aacgtagaggatcagaacgactccgattccacgccccccaaaaagaaaatgcggaagaca
gaaaacggaatgtatgcttgtgatttgtgtgataagatattccaaaagagtagctcactg
ttgagacataaatacgaacacacaggtaaaaggccccacgagtgtggcatctgcaaaaag
gcgtttaaacacaagcatcacctgatcgagcacatgcgcctgcactccggggagaagccc
taccagtgcgacaagtgcgggaagcgcttctcccactcgggctcctactcccaacacatg
aaccaccgctactcctactgcaagagggaggccgaggaacgggagccccctgagccgggg
gctgcaggcccaggggtcccgcccgagcagcatgcggggcagggcgactcggacgagagg
gagagctcgacgcgggaggaggatgaggacagcgaaaaggaggaggaagaggaggaggag
gagcgggagctggaggagctggaggaggagaagggaagtggagtggcgcgaggggaggag
gaggtggaggacggagaggaggagatggacgacgaggaggacgaggacgaggaggcggag
gatgagggggagagcgcagaaacggaaggtgtggggcagggggcgggggctggaggccag
gcccacagcttagaacacaaagtcagtgagggcagcgagcaggtgtccgaagagaaaaca
aatgaagcctaa
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integrated database retrieval system
