Bubalus bubalis (water buffalo): 102404417
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Entry
102404417 CDS
T05912
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A isoform X2
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03030
DNA replication
bbub03410
Base excision repair
bbub03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102404417 (POLE)
03410 Base excision repair
102404417 (POLE)
03420 Nucleotide excision repair
102404417 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbub03032
]
102404417 (POLE)
03400 DNA repair and recombination proteins [BR:
bbub03400
]
102404417 (POLE)
Enzymes [BR:
bbub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
102404417 (POLE)
DNA replication proteins [BR:
bbub03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
102404417 (POLE)
DNA repair and recombination proteins [BR:
bbub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
102404417 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
GARP
Motif
Other DBs
NCBI-GeneID:
102404417
NCBI-ProteinID:
XP_006078316
LinkDB
All DBs
Position
17:complement(28000494..28058063)
Genome browser
AA seq
2287 aa
AA seq
DB search
MVLRNTGRLRSDPGADGEPSRDDGSSSSVSALKRLERSQWTDKMDLRFGFERLKEPGEKT
GWLINMHPTEVLDEDKRLVSAVDYYFIQDDGSRFKVALPYKPYFYIATRKGCEREVSSFL
AKKFQGKIAKVETVPKEDLDLPNHLVGLKRNYIKLSFNTVEDLVKVRKEISPAVKKNRDQ
GHASDAYTTMLSSVLQGGSVIIDEEETSKKIADQLDNIVDMREYDVPYHIRLSIDLKIHV
AHWYNVRYRGSAFPVEIARRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMI
DGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEVHLIQRWFEHIQEAKPTIMV
TYNGDFFDWPFVEARAAVHGLSMYQEIGFQKDSQGEYKSPQCIHMDCLRWVKRDSYLPVG
SHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDAETYV
GGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTMHHAIEEEEKVPMEQVINFQEVC
DQIKTKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPG
ANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLTPEGPARAFHELSREEQAKYEK
RRLADYCRKAYKKIHVTKVEERLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS
AAVEVGDAAEVKRCRNMEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA
NIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKTTNVKKPKVTISYPGAMLNIM
VKEGFTNDQYQELAEPSSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSK
AANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYII
SRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSA
IQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDVYKQKKISELFVLEGKRQVGMAQA
SEGTQSLGSPDMEDFGLTKPLHSAVPIATKRKRIHCERQEGSQDLELTMPWQEVLGQPPA
LGTTQEEWLVWLQFHKKKWQLQAQQRLAHKKRRRLEGAEGAPRPGAIREGPSTGLGGFFR
RTARSILDLPWQIVQISETSQAGLFRVWAVIGSDLYCIKLNIPRVFYVNQRVAKAEEGPS
YRKVNRVLPRSNMVYNLYEYSVPEDMYQEHINEINTELAAPDIEGVYETQVPLVFRALVQ
LGCVCVVNKQLVRHLSGWEAETFTLEHLEMRSLAQFNYLEPGSIRHIYLYHHAQGHKALF
GIFVPSQRKAAVFVLDTVRSNQMPSLNALYSTEHSLLLEKVGPELLPPQKHAFEVRAETD
LKIVCRAIQRFLLTYKEERRGPTLIAVQSNWDLKRLTGEIPVLEEFPLVPVRVADKISYG
VLDWQRHGARRMIRHYLNLDTCLSQAFEMSRYFHVPVGNLPEDISTFGSDLFFARHLQRH
NHLLWLSPTSRPDLGGKEADDNRLVMEFDDQAPVEINSSGCYSTVCVELDIQNLAVNTIL
QSHHVNDMEGADSIGISFDVIQQASLEEMITGNQAASAPASYDETALCSNTFRILKSMVV
GWVKEITQYRNVYADNQVMHFYRWLRSPSSLLHDPALHRTLHSMMKKLFLQLIAEFKRLG
SSVVYANFNRIILCTKKRRVEDALAYVEYITKSIHSKEIFHSLTISFSRCWEFLLWMDPS
NYGGIKGTVPSRIHCGQDSPEEGRAEQGEPEEEEDEDEEEEEEDEGGAQELDVEDLLENN
WNILQFLPQAASCQSYFLMIVSAYIVAVYHSMKEELRRSTPGSTPVRRRGASQLSQEAQG
EAGALPGMITFSQDYVANELTQNFFTITQKIQKKVTGSRNSTEPSEMFPVLPGSHLLLNN
PALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVLPEVICH
NCNFCRDLDLCKDPSFSQDGTVLPQWLCSNCQVAYDSSVIEMALVEALQKKLMAFTLQDL
VCLKCRGVKETNMAVYCSCAGGFSLTIHTKVFMEQIRIFQNIAQHYGMSYLKETLDWLQL
QNPQVGH
NT seq
6864 nt
NT seq
+upstream
nt +downstream
nt
atggttctgaggaataccgggcgactgcgctcggacccgggcgcggacggggagcccagc
cgggatgatggctcctcttcctctgtctcggcactcaagcgcctggagcgcagtcagtgg
acagataagatggatctgcggtttggttttgagagactcaaggagcctggtgagaagact
ggctggctcatcaacatgcaccctactgaggtattagatgaagataaacgcttagttagt
gctgtggattactactttattcaagacgatgggagcagatttaaggtggccttgccctac
aagccatatttctacattgcgaccagaaagggttgtgagcgagaagtttcgtcttttctt
gctaagaagtttcagggtaaaattgccaaagtagagactgtccctaaggaggatctggac
ttgccaaatcacttggttggtttgaaacgaaattacattaagctgtccttcaacaccgtt
gaggacctcgtcaaagtgaggaaggagatctccccagctgtgaagaaaaaccgggaccag
ggtcatgccagtgatgcctacacaactatgctctccagtgttctgcaagggggcagtgta
attattgatgaagaggaaacctctaagaagattgccgaccagttggacaacattgtggac
atgagagagtatgatgtgccttaccatatccgtctctccatcgacctgaagatccacgtg
gctcactggtacaatgtccggtaccgaggaagtgcctttccagtggaaattgcccgccgc
gatgacctcgttgaacgacctgaccccgtggttttagcatttgacattgagacaaccaaa
ctgcccctcaagtttccagatgctgagaccgaccagattatgatgatttcctatatgatt
gatggtcagggctacctcatcaccaacagggagattgtctcagaggatatagaagatttc
gaattcacccccaagccagaatatgaaggacccttctgtgtcttcaatgagcctgatgag
gttcatctaatccaaagatggtttgaacacatccaggaggccaaacccaccatcatggtc
acctataatggggacttttttgactggccgtttgtggaggccagagcagcggtccatgga
ctgagcatgtaccaggagatagggttccagaaggacagccagggggagtacaaatcaccc
cagtgtatccacatggactgtctcaggtgggtgaagagggacagttacctgcccgtgggc
agccacaacctcaaggcggcagccaaagccaagctgggctacgacccagtggaactggac
cctgaagacatgtgccggatggccactgagcagccccagactctggcgacctactcggtg
tcggatgcagtggccacatactacctgtacatgaagtatgtccacccgtttatattcgcc
ctgtgtaccatcatccccatggagcccgatgaggtgctgcggaaaggctctgggacgctg
tgcgaggccttgctaatggtgcaggccttccatgccaacatcatcttccccaacaagcag
gagcaggagttcaacaagctgacagatgacggccacgtgctggatgctgagacctacgtg
ggtggccacgtagaagccctggagtccggcgtgttccgcagtgacatcccctgccggttc
cggatgaatcctgctgcctttgacttcctgctgcagcgggtggagaaaaccatgcatcac
gccatcgaggaagaggagaaggtgcccatggagcaggtcatcaacttccaagaggtgtgt
gatcagattaagaccaagctcacctccctgaaagatgttcctaaccgaattgagtgtccc
ctcatctaccacctggacgtgggggccatgtaccccaacatcatcttgacaaatcgcctg
cagccctctgccatggtggacgaggccacctgtgcagcctgtgacttcaacaagcctgga
gcgaactgccagaggaagatggcctggcagtggaggggagagttcatgccagccagtcgc
agtgagtatcatcggatccagcaccaactggagtcagagaagttccctcccttgaccccc
gagggcccagcccgggcctttcacgagctgtcccgtgaggagcaggctaaatatgagaag
cggaggctggcagattactgccggaaggcatacaagaaaatccacgtgaccaaggtggaa
gagcgtctcaccaccatctgccagcgggagaactccttctatgtggacactgtacgcgct
tttcgggacaggcgctatgagttcaaaggtctccacaaggtgtggaaaaagaagctctcc
gcagccgtggaggtgggggacgcggcggaggtgaagcgttgcaggaacatggaggtcctg
tacgactccctgcagctggcgcacaagtgcatcctcaactccttctatggctacgtcatg
cgcaagggggcccgctggtactccatggagatggctggcattgtctgcttcacaggggcc
aacatcatcacccaggcacgggagctgatcgagcaaatcgggaggcccttagagctggac
acagatggaatatggtgtgtcctgcccaacagcttccccgaaaactttgtcatcaagacc
accaatgtgaaaaagcccaaggtgaccatctcttaccctggggctatgttaaacatcatg
gtcaaggaaggcttcaccaatgatcagtaccaggagctggctgagccttcttcactaacc
tacgtcactcgctcagagaacagcatctttttcgaggttgatgggccctaccttgccatg
atccttccagcctccaaggaagaaggcaagaaactgaagaagaggtatgccgtgttcaat
gaggatggttccctggctgaactcaagggctttgaggtcaaacgccgtggggagctgcag
ctgattaaaatcttccagtcctcagtgtttgaggcctttcttaagggcagcaccctagaa
gaagtgtatggctctgtcgccaaggtggctgattactggctggacgtactatacagcaag
gcagctaacatgcctgattccgaactgttcgagctgatctccgagaaccgttccatgtct
cggaagctggaagattatggggagcagaagtcgacatccatcagcacggccaagcgcctg
gctgagttcctgggagatcagatggtgaaggatgcagggctgagctgccgctacatcatc
tcccggaagcctgaggggtctccagtcacagagagggccattccactggccattttccag
gcagagcccacagtgaggaagcactttctccggaaatggctaaagagttcttctcttcag
gactttgatattcggacaattctggattgggactactacattgagcggctggggagtgcc
atacagaagatcatcacaatccctgcggccctgcagcaggtgaagaacccagtaccgcgt
gtcaaacaccctgactggctgcacaaaaaactgctagagaagaatgatgtctacaagcag
aagaagatcagtgagctcttcgtccttgagggcaagagacaggtgggcatggcccaagct
tcagaaggtacgcaaagccttggctcccctgacatggaggactttggcctcacaaagcca
cttcactcggcagtgcccattgctaccaagagaaagcgtatccactgtgagaggcaagag
gggtcgcaggacctggagctgacgatgccctggcaggaggttttggggcagcctccagca
cttggaaccacccaggaagagtggctggtctggctccagttccacaagaagaagtggcag
ctgcaggctcaacagcgccttgctcacaagaagaggcggcgtctggagggggcagagggc
gcaccaaggcctggggccatccgagaggggccctccacaggactggggggcttctttcga
agaacggctcgcagcattctggaccttccatggcagattgtgcagatcagtgagaccagc
caggctggcttgttcagggtatgggctgtcatcggcagtgacctgtactgcatcaagctg
aacattccccgggtgttctacgtgaaccagcgggtggccaaagcggaggagggcccttcc
tatcggaaggtgaatcgagtccttcctcgctccaatatggtctacaacctctacgaatac
tcggtgccagaggacatgtaccaagaacatatcaacgagatcaacactgagctggcggca
ccagacatcgagggcgtgtatgagactcaggttccgttagtgtttcgggccctggtgcag
ctgggctgcgtgtgtgtggtcaataaacagctggtgaggcacctttcaggctgggaagca
gaaaccttcactcttgagcacctggagatgcgctccttggcccagttcaactacctggaa
ccagggagcatccgccacatctacctgtaccaccatgcacagggccacaaggctctcttt
ggcatcttcgtaccctcacagcgcaaggcggctgtgtttgtgctggataccgtgcgaagc
aaccagatgcccagcctcaatgccctgtactcaaccgagcacagcctcctgctggagaaa
gtgggccctgagcttctgcccccccaaaaacacgcttttgaagttcgtgctgaaacagac
ttgaagatcgtctgcagagccatccagcgcttcctgttgacctacaaagaggagcgccgt
gggccgactctcattgctgttcagtccaactgggacctgaagaggctgactggcgagatc
cctgtcctggaggaattcccactggtgcctgtccgtgtggctgacaagatcagctatggg
gtcctggactggcagcgccacggagcccggcgcatgatccggcactacctcaacctggac
acgtgtctgtcgcaggccttcgagatgagcaggtacttccacgtccccgttgggaatcta
cctgaggacatctctacctttggctccgacctcttctttgcccgccacctccagcgccac
aaccacctgctctggctctctcctacgtcacgccctgacctgggtgggaaggaggctgac
gacaacaggctcgtcatggagtttgatgaccaagcccctgtggagatcaacagttccggc
tgttactccacagtgtgcgtggaactggatattcagaacctggccgtcaacaccatcctg
cagtctcaccacgtcaatgatatggagggggccgacagcattggcatcagcttcgatgtg
atccagcaggcctccctggaggaaatgatcacgggcaatcaggctgccagcgcccctgcc
agctatgacgagacagccctctgctccaacaccttcaggatcctgaagagcatggtggtg
ggctgggtgaaggagatcacgcagtaccgcaacgtctacgccgacaaccaggtgatgcac
ttctaccgctggctccggtcgccgtcttcactgctgcacgaccctgccctgcaccgcacg
ctgcacagcatgatgaagaagctcttccttcagctcatcgctgagttcaagcgcctgggg
tcatcggtcgtctatgccaacttcaaccgcatcatcctctgcaccaagaagcggcgggtg
gaggacgccctggcctacgtggagtacatcaccaaaagcatccactctaaagagatcttc
cattctttgacaatttccttttctcgatgctgggaatttcttctctggatggatccctct
aattatggtggaatcaaaggaactgttccatctaggattcactgtggacaggactcccca
gaagagggcagagcagagcagggggaacctgaggaggaggaggatgaggacgaggaggag
gaggaggaggacgagggaggcgcacaggaactggatgtcgaggacttgctggaaaacaac
tggaacatcctgcagttcctgccccaggcagcctcctgccagagctacttcctcatgatc
gtttcagcatacatcgtggccgtgtaccacagcatgaaggaggaactgaggcgcagcacc
ccagggagcacccccgtgaggaggaggggagccagccagctctcccaggaggcccagggg
gaggccggagcccttcctggaatgatcaccttctcacaagattatgtggcaaacgaactc
actcagaacttcttcaccatcacgcagaagattcagaagaaagtcacaggctctcggaac
tctactgagccctcagaaatgtttcctgtcctccccggttctcacctgctgctcaataac
cctgctctggagttcatcaaatatgtgtgcaaggtcctgtctctggacaccaacatcaca
aaccaggtgaacaagctaaaccgagacctgctgcgcctggtagacgtaggcgagttctca
gaggaggcccagttccgagacccctgccgttcctacgtgctccctgaggtcatctgccac
aactgtaacttctgccgggacctggacctgtgcaaagacccctccttctctcaggatggg
accgtgctgcctcagtggctctgctccaactgtcaggttgcctacgactcatcagtcatt
gagatggccctggtggaagccctacagaagaagctgatggcctttaccctgcaggacctg
gtctgcctgaagtgccggggtgtgaaggagaccaacatggccgtgtactgcagctgtgcg
gggggcttctccctcaccatccacactaaggtcttcatggaacagatcagaatcttccag
aacatcgcccagcactatggcatgtcgtacctcaaggagaccctggattggctgcagctt
cagaacccccaagtgggccattag
DBGET
integrated database retrieval system
