Bubalus bubalis (water buffalo): 102404585
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Entry
102404585 CDS
T05912
Symbol
SMC4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbub03036
]
102404585 (SMC4)
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
102404585 (SMC4)
Condensin II
102404585 (SMC4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
Mce4_CUP1
ATG17_like
Motif
Other DBs
NCBI-GeneID:
102404585
NCBI-ProteinID:
XP_006072902
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All DBs
Position
1:complement(152075511..152108216)
Genome browser
AA seq
1288 aa
AA seq
DB search
MPRKGTQPSTAHRREEGPPRSPDGTSSDAEPDPPPGRARSQALATAETPSEEIDNRSLEE
ILNSIPPPPPPAMTNEPGAPRLMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKS
NVIDSMLFVFGYRAQKIRSKKLSVLIHNSDEHKDIQSCTVAVHFQKIIDKEGDDYEVIPN
SNFYVSRTAYRDNTSVYHVSGKKTTFKDVGILLRSHGIDLDHNRFLILQGEVEQIAMMKP
KGQTEHDEGMLEYLEDIIGSGRLNEPIKVLCRRVEILNEHRGEKLNRVKMVEKEKDALEG
EKNIAIEFLTLENEIFRKKNHVCQYYIYDLQKRIAEMETQKEKINEDTKEINEKSNILSN
EMKAKNKAVKDVEKKLNKITKFIEENKEKFTKLDLEDVQVREKLKHATSKAKKLEKQLQK
DKEKVEEFKSIPAKSENIIRETTTKNNALEKEKEKEEEKLKEVMDSLKQETQGLQKEKES
REKELMDFSKSVNEARSKMDVAQSELDIYLSRHNTAVSQLGKAKEALMAASETLKERKAA
IGDIEAKLPQTEHELKEKEKELQKLTQEEINFKSLVRDLFQKVEEAKSSLAMNRSRGKVL
DAIIQEKKSGRIPGIYGRLGDLGTIDEKYDVAISSCCHALDYIVVDSIDTAQECVNFLKR
QNIGVATFIGLDKMAVWAKKMTKIQTPENTPRLFDLVKVKDGAIRQAFYFALRDTLVADS
LDQATRVAYQKDRRWRVVTLQGQIIEQSGTMTGGGSKVMKGRMGSSVVVEISEEEVNKME
SQLQRDSQKAVQIQEQKVQLEEAILRLRHSEREMRNTLEKFSASIQRLSEQEEYLNVQVK
ELEANVLATVPDKKQQKLLEENVNTFKTEYNSVAERAGKVEAEVKRLHNIIVEINNHKLK
AQQDKLDKINKQLDECASAITKAQVAIKTADRNLKKAQDSVLRTEKEIKDTEKEVDDLTT
ELKSLEDKAAEVVKNTNDAEASLPEIQKEHRNLLQELKVIQENEHALQKDALSIKLKLEQ
IDGHIGEHNSKIKYWQREISKISLHPIEDNHVEKIPVLSPEELEAIKNPDSITNQIAVLE
AQCHEMKPNLGAIADYKKKEELYLQRVAELDKITNERDNFRQAYEDLRKQRLNEFMAGFY
IITNKLKENYQMLTLGGDAELDLVDSMDPFSEGITFSVRPPKKSWKKIFNLSGGEKTLSS
LALVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISD
RLIGIYKTYNITKSVAVNPKEIASKGLC
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtaaaggcacccagccctccactgcccatcgcagagaggaagggccgccgcgg
tccccggacggcaccagcagcgacgcggagcccgatccaccgcccggccgcgcgaggagc
caggcgctggccaccgcagaaactccaagtgaggaaattgataatagaagtttagaagag
attttgaatagcatccctcctcccccacctcctgcaatgaccaatgaacctggagctcct
cgtcttatgataactcatattgtaaaccagaacttcaaatcttacgctggggaaaaaatt
ctgggacctttccataagcgattttcctgtattattgggccaaatggcagtggcaaatcc
aatgttattgattctatgctttttgtgtttggctatcgagcacaaaaaataagatctaaa
aaactctcagttctaatacacaattctgatgaacataaggatattcagagttgcactgta
gctgttcattttcaaaagataattgataaggaaggggatgattatgaagtcattcctaac
agtaacttctatgtatccagaacggcctacagagataatacttctgtttatcacgtaagt
gggaaaaagactacatttaaggatgttggaattcttcttcgaagtcatggaattgacttg
gaccataatagatttttaatcttacagggtgaagtggaacaaattgctatgatgaaacca
aaaggccagactgaacacgatgagggtatgcttgaatatttagaagatataattggttct
ggaagactaaatgaacctattaaagtcttgtgtcggagagttgaaatattaaatgaacac
agaggagagaagttaaacagagttaagatggtagaaaaggaaaaggatgccttagaagga
gagaaaaacatagccattgaatttcttaccttggaaaatgaaatatttagaaaaaagaat
catgtttgtcagtattacatttatgatctgcagaaacgaattgctgaaatggagactcaa
aaggaaaaaattaatgaagataccaaagaaattaatgagaagagcaatatactgtcaaat
gaaatgaaagctaagaataaagctgtaaaagatgtagagaagaagctgaataaaattaca
aaatttattgaggagaacaaagaaaaatttacaaaactagatttggaagatgttcaagtt
agggaaaaattgaaacatgctacaagtaaagccaaaaaactagagaaacaacttcaaaaa
gataaagaaaaggttgaagaatttaaaagtatacctgccaagagtgagaatatcataagg
gagacaacaactaaaaacaatgcccttgagaaagaaaaagaaaaagaagaagaaaaatta
aaggaagttatggatagccttaaacaggaaacacaaggccttcaaaaagaaaaagaaagt
cgagagaaagaacttatggacttcagcaaatcagtaaatgaagcacgttcaaagatggat
gtagctcaatcagaacttgatatctatctcagtcgtcataatactgcagtgtctcaatta
ggtaaagccaaagaagctctaatggcagcttctgagactctcaaagaaaggaaagctgca
attggagatatagaggcaaaactccctcaaactgaacatgagctaaaggagaaagaaaaa
gaacttcagaaacttacacaagaagaaataaatttcaaaagtttggttcgtgatcttttc
caaaaagttgaagaagcaaagagttccttagcaatgaatcgaagtaggggaaaagtcctt
gatgcaataattcaagaaaaaaaatctggcagaattccaggaatatatggacgactgggg
gacttaggaacaattgatgaaaaatacgatgttgctatttcatcttgttgtcatgcatta
gactacattgttgttgattctattgatacagcccaagaatgtgtaaacttccttaaaaga
caaaatattggagttgcaaccttcataggtttggataagatggcagtgtgggcaaagaaa
atgaccaaaattcaaactcctgagaatacgcctcggttatttgatttagtgaaagtaaaa
gatggggcaattcgccaagctttttactttgccttacgggataccttagtagctgacagc
ttagatcaagccacacgagtagcttaccaaaaagatagaagatggagagtggtaacatta
caagggcaaatcatagaacagtcaggtacaatgactggcggtggaagcaaagtaatgaaa
ggaaggatgggttcatcagttgttgttgaaatctcagaagaagaggtaaataaaatggaa
tcacagttgcagagagactctcaaaaagcagtgcagattcaggaacagaaagtacaactg
gaagaagcaatacttaggttaaggcatagtgaacgagaaatgaggaatacactagaaaag
ttttctgcaagcatccagcgtttatcagagcaagaagaatatttgaatgtccaagttaag
gaacttgaagctaatgtacttgctacagtccctgacaaaaaacagcaaaaactgcttgaa
gaaaatgttaatactttcaagacagagtataacagtgtggctgagagagctggtaaagtg
gaagctgaggttaaaaggttacacaatatcatcgtagaaatcaataaccataaactcaag
gcccaacaagacaaacttgataaaataaataagcaattagatgaatgtgcttctgctatt
actaaagcacaagtggcaatcaagactgctgacagaaatcttaaaaaggcacaagacagt
gtcttacgtacagagaaagaaataaaagatactgagaaagaagtagatgacttaacaaca
gagctaaaaagtcttgaagacaaagcagcagaggttgtaaagaatacaaatgatgcggag
gcatccttaccagaaatccagaaagaacatcgaaacctacttcaagaactaaaagtaatt
caggaaaatgaacatgctctccaaaaagatgcacttagtattaagttgaaacttgaacaa
atagatggtcacattggtgaacataattctaaaataaaatattggcaaagagagatttca
aaaatatcactgcatcccatagaagataatcatgttgaaaagattccagttctaagccca
gaagagcttgaagcaatcaagaacccagattctataacaaatcaaattgcagttttggaa
gcccagtgtcatgaaatgaaaccaaatcttggtgccattgcagattataaaaagaaggaa
gaattatatttacaacgggtagcagaattggacaaaattactaatgaaagagataatttt
agacaggcatatgaagatcttcgaaaacaaagacttaatgaattcatggcaggtttttat
ataataacaaataaattaaaggaaaattaccaaatgcttactttgggaggtgatgctgag
ctggaccttgtagacagcatggatcctttctctgaaggaatcacgttcagtgttcgacca
cctaaaaaaagttggaagaagatcttcaacctttcaggaggagagaaaacacttagttca
ttggctttagtgtttgctcttcatcactataaacccactcccctgtacttcatggatgag
attgatgcagcccttgatttcaaaaatgtttctattgttgcattttacatatatgaacaa
acaaaaaatgcccagttcataataatttctcttcgaaataatatgtttgagatttcagat
agacttattggaatttacaagacatacaatataacaaaaagcgttgcagtaaacccaaaa
gaaattgcatctaaaggactttgctaa
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