Bubalus bubalis (water buffalo): 102404803
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Entry
102404803 CDS
T05912
Symbol
SOX9
Name
(RefSeq) transcription factor SOX-9
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04024
cAMP signaling pathway
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
102404803 (SOX9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbub03000
]
102404803 (SOX9)
Transcription factors [BR:
bbub03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102404803 (SOX9)
SSDB
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GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
102404803
NCBI-ProteinID:
XP_025135172
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All DBs
Position
3:4493353..4498743
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AA seq
525 aa
AA seq
DB search
MNLLDPFMKMTDEQEKGLSAAPSPTMSEDSAGSPCPSGSGSDTENTRPQENTFPKGEPDL
KKESEEDKFPVCIREAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAAR
RKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRK
SVKNGQAEAEEAPEQTHISPNAIFKALQADSPHSSSGMSEVHSPGEHSGQSQGPPTPPTT
PKTDVQPGKADLKREGRPLPEGGRQPPIDFRDVDIGELSSDVISNMETFDVHEFDQYLPP
NGHPGVPATHGQVTYTGSYGVSSTAASPAGAGHVWMSKQQAPPPPPPQQPPPPPPQPAPP
QAPPQPPPAPQPAQPQPAPPQAPPQQQQPPPPPPAHALGALGSEPGPAQRTHIKTEQLSP
SHYSEPQQHSPQQIAYSPFSLPHYGPSYPPITRAQYDYNDPQNSGAYYSHAAGQGSGLYS
TFSYMSPAQRPMYTPIADTSGVPSIPQTHSPQHWEQPVYTQLTRP
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcctggaccccttcatgaagatgaccgacgagcaggagaagggcctgtccgcc
gcccccagccccaccatgtccgaggactcggcgggctcgccctgtccttcgggctccggc
tccgacaccgagaacacgcggccccaggagaacacgttccccaagggcgagccggacctg
aagaaggagagcgaggaggacaagttccccgtgtgcatccgcgaggccgtcagccaggtg
ctcaagggctacgactggacgctggtgcccatgccggtgcgcgtcaacggctcgagcaag
aacaagccgcacgtcaagcggcccatgaacgccttcatggtgtgggcgcaggcggcgcgc
aggaagctggccgaccagtacccgcacctgcacaacgccgagctcagcaagactctgggc
aagctctggagactgctgaacgagagcgagaagcggccgttcgtggaggaggcggagcgg
ctgcgcgtgcagcacaagaaggaccacccggactacaagtaccagccgcgccggaggaag
tcggtgaagaacggccaggccgaggccgaggaggccccggagcagacgcacatctcgccc
aacgccatcttcaaggcgctgcaagccgactcgccgcactcctcctccggcatgagcgag
gtgcactcccctggcgagcactcggggcaatcccagggtccgccgacgccccccaccacc
cccaaaaccgacgtgcagccgggcaaggccgacctgaagcgcgaggggcgccccctgcca
gaggggggtcggcagccccccatcgacttccgcgacgtggacatcggcgagctgagcagc
gacgtcatctccaacatggagaccttcgacgtccacgagttcgaccagtacctgccgccc
aacgggcacccgggggtgccggccacgcacggccaggtcacctacacgggcagctacggc
gtgagcagcacggcggccagcccggcgggcgcgggccacgtgtggatgtccaagcagcag
gcgccgccgccgccgcccccgcagcagccgccgccgcccccgccgcagccggccccgccg
caggcgcccccgcagccgccgccggcgccgcagcccgcccagccgcagcccgccccgccg
caggcgcccccgcagcagcagcagccgccgccgccgccgccggcgcacgcgctgggcgcg
ctgggcagcgagccgggccccgcgcagcgaacgcacatcaagacggagcagctgagcccg
agccactacagcgagccgcagcagcactcgccgcagcagatcgcctacagccccttcagc
ctcccgcactacggcccctcctacccgcccatcacgcgcgcgcagtacgactacaacgac
ccccagaactcgggcgcctactacagccacgcggcgggccagggctccggcctctactcc
accttcagctacatgagcccggcgcagcggcccatgtacacgcccatcgccgacacctcg
ggggtgccctccatcccccagacccacagcccgcagcactgggaacagccggtctacaca
cagctcaccagaccctga
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