Bubalus bubalis (water buffalo): 102404858
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Entry
102404858 CDS
T05912
Name
(RefSeq) protocadherin beta-13
KO
K16494
protocadherin beta
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bbub04515
]
102404858
Cell adhesion molecules [BR:
bbub04515
]
Cadherins
Protocadherins
102404858
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Peptidase_S55
Motif
Other DBs
NCBI-GeneID:
102404858
NCBI-ProteinID:
XP_025148328
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Position
9:complement(58840638..58845460)
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AA seq
788 aa
AA seq
DB search
MEASRKLVCRQRQVLFFFLFLRLALAGFESRRYSVVEEAEGSSFVTNLAKDLGLGQGELS
RRGARVISKGNKLYLQLDQESGDLLLNKKLDREELCGQTEPCVLRFQVLLENPLEFFQAE
LQVIDINDHTPVFMDGDMLLKISENSLPGTTFPLKNAQDMDVGQNNIENYIISPNSYFRV
LTRKRSDGRKYPELVLDKVLDREEEAEFRLTLTAQDGGSPPRSGTAHVYIEVVDINDNAP
EFEQPFYRVKIPEDSPKGFLVVKVSATDVDTGVNGEISYSLSQASEDISKTFAINAMTGE
IRLKKQLDFETTQSYEVNIEAIDTGSLSGKCTVLIQVVDVNDNAPEVTLSALTGQIPENS
PEIVVAVFSVSDLDSEENGKVSCSIQYDLPFLLKSSMENFYTLVTERPLDRETRAEYNIV
IAVTDLGTPRLKTEHNITVLVSDVNDNAPTFTQTSYTLWVRENNSPALHIGSVSATDTDA
GANAQVTYSLLPPPDPLVPLASLVSINPDNGHLFALTSLDYEALRAFEFRVGASDHGSPA
LSSQALVRVLVADANDNAPFVLYPLQNASAPCTELVPRAAEPGYLVTKVVAVDGDAGQNA
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAPKQRLVVLVKDNGEPPLSASVTLHV
LLVDGFSQPYLPAPEAEAAAAAPADPLTVYLVVALASVSSLFLFSVLVFVAVRLCRRGGA
ASAGRCPVVEGHFPGQLVDVSGTGTLSQSYQYEVCLMGGTGTGEFKFLKPVVPKFQSHFP
GPEINPPF
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggaggccagcaggaagcttgtttgcagacaaaggcaagtccttttcttctttctcttc
ttacgcttagctctggcgggctttgaatctaggcgttattctgtcgtggaggaagctgag
gggagctcttttgtaaccaatttagcaaaagacctgggtctggggcagggggaactctcc
aggcggggagcaagggtcatttccaaagggaacaaactgtatttgcagctggatcaggag
tctggggatttactgctaaataagaaactggaccgcgaggaactgtgtggtcagacagag
ccatgtgtgctgcgtttccaggttttactagagaatcccttagagttttttcaagctgag
ctacaggtaatagacataaatgaccatactccagtgttcatggatggagatatgttgtta
aaaatatcagagaacagtcttcctggcactacatttcctctaaagaatgctcaggacatg
gatgtaggccaaaataatattgaaaattatataatcagtcccaactcctattttcgggtc
ctcactcgcaaacgcagcgatggcagaaaatatccggaacttgtgctggacaaagtactg
gatcgcgaggaggaagctgagttcaggttaaccctcactgctcaggatggtggttctcca
ccacggtctggcaccgctcacgtctacatagaagtcgtggacatcaatgataacgcccct
gaatttgaacagcctttctacagagtaaagatccctgaggacagtcccaaaggcttcctt
gttgtcaaagtctctgctaccgatgtagacacaggagtcaatggagagatttcctattca
ctttcccaggcttcagaagacattagcaaaacctttgcgatcaatgccatgactggagaa
attcgactgaaaaaacaacttgatttcgaaacaactcagtcatatgaggtcaatatcgag
gccatcgatactggaagcctttctggaaaatgcaccgttctgattcaagtcgtggatgtg
aacgacaatgccccagaagtcaccctgtctgcacttactggacagatccctgagaactcg
cctgagattgtggttgcagttttcagtgtttcagatcttgactctgaagagaatgggaaa
gtaagttgctccattcagtacgatctaccgtttttgctgaaatcttccatggaaaatttt
tacactctagtaacagaacgaccgctagacagagagaccagagccgaatacaacatcgtc
atcgctgtcacggacttggggacacccaggctgaaaaccgagcacaacataaccgtgctg
gtgtccgacgtcaacgataacgcccccaccttcacccagacctcctacaccctctgggtc
cgcgagaacaacagtcccgccctgcacatcggcagcgtcagcgccacagacacagacgcg
ggcgccaacgcccaggtcacctactcgctgctgccgccgcccgacccgctcgtgcccctc
gcctccctcgtgtccatcaaccccgacaacggccacctcttcgccctcacgtccctggac
tacgaggccctgcgagccttcgagttccgcgtgggcgcctccgaccacggctcgcccgcg
ctcagcagccaggcgctggtgcgcgtgctcgtggcggacgccaacgacaacgcgcccttc
gtgctctacccgctgcagaacgcctcggcgccctgcaccgagctggtgcccagggcggcc
gagccgggctacctggtgaccaaggtggtggcggtggacggcgacgcgggccagaacgcc
tggctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcac
aacggcgaggtgcgcacggcgcggctgctgagcgagcgcgacgcgcccaagcagcggctg
gtggtgctggtcaaggacaacggcgagccgccgctgtcggccagcgtcacgctgcacgtg
ctgctggtggacggcttctcgcagccctacctgccggccccggaagcggaagcggcggcc
gcggcgccggccgacccgctcaccgtctacctggtggtggccttggcgtcggtgtcgtcg
ctcttcctcttctcggtgctggtgttcgtggcggtgcggctgtgcaggaggggcggggcg
gcctcggcgggtcgctgcccggttgtcgagggccacttccctggccagctggtggacgtc
agcggcacggggaccctgtcccagagctaccagtacgaggtgtgcctgatgggaggtacc
gggacgggcgagttcaaattcctaaagccagttgtacccaagtttcagagccatttcccg
gggccagaaataaatcccccattttag
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