Bubalus bubalis (water buffalo): 102404923
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Entry
102404923 CDS
T05912
Symbol
SNX13
Name
(RefSeq) sorting nexin-13 isoform X4
KO
K17925
sorting nexin-13
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bbub04990
]
102404923 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
bbub04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
102404923 (SNX13)
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Calpain_inhib
Motif
Other DBs
NCBI-GeneID:
102404923
NCBI-ProteinID:
XP_006054134
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Position
8:complement(25974250..26120317)
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AA seq
957 aa
AA seq
DB search
MLTETSLSIWGWGSLGIVLSLITFGPFVIFYLAFYILCFVGGGFVVTLLFGKTNSEKYLE
QCEHSFLPPTSTGIPKCLEEMKREARTIKIDRRLTGANIIDEPLQQVIQFSLRDYVQYWY
YTLSDDESFLLEIRQTLQNALIQFATRSKEIDWQPYFTTRLVDDFGTHLRVFRKAQQKIT
EKDDQVKGTAEDLVDTFFEVEVEMEKDVCRDLVCTSPKDEEGFLRDLCEVLLYLLLPPGD
FQNKIMRYFVREILARGVLLPLINQLSDPDYINQYIIWMIRDSNCNYEAFMNIIKLSDNI
GELEAVRDKAAEELQYLRSLDTAGDDINTIKNQINSLLFVKKVCDSRIQRLQSGKEINTV
KLAANFGKLCTVPLDSILVDNVALQFFMDYMQQTGGQAHLFFWMTVEGYRVTAQQQLEVL
SSRQKDGKHQTNQTKGLLRAAAVGIYEQYLSEKASPRVTVDDYLVAKLADTLNHEDPTPE
IFDDIQRKVYELMLRDERFYPSFRQNALYVRMLAELDMLKDPSFRGSDDGDGESFNGSPT
GSINLSLDDLSNVSSDDSVQLHAYISDTGVCNDHGKTYALYAITVHRRNVNTEEMWKTYR
RYSDFHDFHMRITEQFENLSSILKLPGKKTFNNMDRDFLEKRKKDLNAYLQLLLTPEMMK
ASPALAHYVYDFLENKAYSKGKGDFARKMDTFVNPLRNSMRNVSNAVKSLPDSLAEGMTK
MSDNMGKMSERLGQDIRQSFFKVPPLIPKTDSDPEHCRVSAQLDDTVDDNIPLRVMLLLM
DEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDWMTSPEQVADLVKRFRDA
FWPNGILAETVPCRDKGIRMRTRVAGKTKLLSIMPDELKHIIGAETTRKGILRVFEMFQH
NQLNRRMVYVFLEGFLETLFPQYKFRELFNKLHSRSKQMQKYKQKLQTTQAPSLQKR
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgttaacagagaccagtctatccatatggggatggggaagccttggcattgtcctttct
ctaataacatttggaccctttgtaatattttatttggcattttatatcctctgctttgtg
ggtgggggttttgttgttactctcctgtttggaaaaacaaactcagagaagtacctagag
cagtgtgaacattcatttctccctccaacatcaactgggattcctaagtgcttagaagaa
atgaaacgggaagccagaactataaagattgatagaagattgacaggtgccaatataatt
gatgaacctctccagcaagttatccagttttccttgagggattatgtccagtattggtat
tatacactaagtgatgatgaatcttttcttcttgaaattaggcagactcttcagaatgca
ctcattcagtttgctactaggtctaaagaaatagactggcaaccttattttactacacgc
cttgtagatgattttggcacacacctacgagtattcagaaaggcccaacaaaagataaca
gagaaagatgatcaagtgaaaggtacagcagaagatcttgtagataccttctttgaagtt
gaagttgaaatggaaaaggacgtttgccgtgacctagtgtgcacttctcccaaagatgaa
gaaggattcctaagggatttgtgtgaggtcttattatatttattgctacctcctggagat
ttccagaacaagatcatgcgatactttgtcagggaaatccttgcacgtggagttcttctt
ccattgataaatcaactcagtgatcctgattatattaatcaatatatcatatggatgatc
cgtgattctaattgcaactatgaggcctttatgaacattattaaattgagtgacaatatt
ggagagctcgaagcagtcagagataaagcagcagaagaattacagtatcttcgatctcta
gatacagctggtgatgatattaacaccatcaaaaatcaaataaatagcttattatttgtg
aagaaagtatgtgactcaagaatacaacggttgcagtcaggcaaagagataaatactgtg
aaactggcagcaaactttgggaaactttgcacagtccccctggacagcattcttgtagac
aatgttgcactgcagttttttatggactacatgcagcaaactggaggtcaggcacatctc
ttcttttggatgacagtggaaggataccgggttacagcccaacagcagctagaagtttta
tcaagtcgtcagaaagatggaaaacatcaaaccaaccaaaccaaaggtcttttaagagca
gctgctgttggaatttatgaacagtatttatcagaaaaggcatctccgagagttactgtt
gatgattatttggtagcaaaattagcagatactttgaatcatgaagatccaacccctgaa
atctttgatgacattcaaaggaaggtgtatgaattgatgcttcgagatgaaagattttat
ccttccttcagacagaatgcactttatgtgcgcatgttagctgagctggatatgttaaaa
gatcctagtttcagaggatcagatgacggtgatggagaatcttttaatgggtctcctaca
ggaagcataaatttgtctttagatgacctttcaaatgtatcttctgatgactcagtacaa
cttcacgcctacatttcagacactggcgtctgtaacgatcatggcaagacatacgcgttg
tacgccatcactgtgcaccggcgcaacgtgaacactgaggagatgtggaagacctaccgt
cgctacagtgacttccacgacttccacatgaggatcactgaacagtttgaaaatctgtca
agcatattaaagcttcctggtaaaaagacttttaataatatggatagagattttttagaa
aagagaaaaaaagatctaaatgcatatttgcagttactgttaactcctgaaatgatgaaa
gcgtctccagccttggctcactatgtgtatgatttccttgagaacaaagcctacagtaaa
gggaaaggggatttcgctcgcaagatggacacttttgtaaatccacttcgaaattctatg
aggaatgtttcaaatgcagtcaaatcccttcctgatagcttggcagagggaatgactaaa
atgtcagacaacatgggcaaaatgtcagaaagattaggtcaagatataaggcaatcattt
ttcaaggttcctcctttaattccaaagactgattcagatcctgaacattgtcgagtttca
gctcaacttgatgatactgtggatgataatattccacttagggtaatgctgcttctcatg
gatgaagtattcgacttaaaagagagaaatcagtggttgcgaaggaatatcaaaaaccta
cttcaacaacttataagagctacatatggtgatactattaatagaaaaatagttgaccat
gttgattggatgacctcaccggagcaagtagctgacttagtgaaacgtttcagagatgcc
ttttggccaaatggcattttagccgagactgtcccgtgcagagataaaggtattcgaatg
agaacaagagtcgcaggaaaaactaaattactttcaattatgccagatgaacttaagcac
attattggagctgagacaacacggaaaggtattcttcgtgtttttgaaatgtttcagcac
aaccagttaaataggagaatggtttatgtctttttggaaggctttttggaaaccttattt
ccacagtataaattccgtgaacttttcaacaaactgcattcacggtcaaagcagatgcaa
aaatataaacagaaacttcaaactactcaagcgccttctttacagaaaaggtga
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