Bubalus bubalis (water buffalo): 102404945
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Entry
102404945 CDS
T05912
Name
(RefSeq) histone deacetylase complex subunit SAP18-like
KO
K14324
histone deacetylase complex subunit SAP18
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03013
Nucleocytoplasmic transport
bbub03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102404945
03015 mRNA surveillance pathway
102404945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102404945
03036 Chromosome and associated proteins [BR:
bbub03036
]
102404945
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102404945
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
102404945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP18
Motif
Other DBs
NCBI-GeneID:
102404945
NCBI-ProteinID:
XP_044798405
LinkDB
All DBs
Position
4:6286181..6287067
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AA seq
171 aa
AA seq
DB search
MLAAGVRGQSECLEGRRRKMVVQLGITQEEIKKEPEKPMDLEKTCPLLLRVFTTNNSRHH
CMDEFSRRNVPSSELQIYTWMDATLKESTSLVKVYPEARKKATHFNFAIVFTDLKRPGYR
VKEIGSTMSGRKGPDDSTTLQSQKFQIGDYLDTVVTPPKRAPPPSGRMRTY
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgcttgctgctggggtcagaggtcagagtgagtgtctcgaaggccggagaagaaagatg
gtggtgcagttgggcattacccaggaggaaattaagaaggagccagagaagcccatggat
ctggagaagacctgcccactgctcctgcgcgtcttcaccaccaacaacagccgccaccac
tgcatggacgagttctcccgcagaaacgtgccatccagcgagctgcagatctacacttgg
atggatgcaaccttgaaagaatcgactagtttagtaaaagtctacccagaagccagaaaa
aaagccacacacttcaattttgcaattgtttttacagatcttaaaaggcctggctatcga
gtaaaggagattggcagcaccatgtctgggagaaaggggcctgatgactccacgaccctg
cagtcacagaagttccaaataggagactatctggacacagtggtcactcctccaaaacgg
gcaccacctccttcagggcgcatgagaacgtattaa
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