KEGG   Bubalus bubalis (water buffalo): 102404979
Entry
102404979         CDS       T05912                                 
Symbol
TRIM42
Name
(RefSeq) tripartite motif-containing protein 42
  KO
K12018  tripartite motif-containing protein 42
Organism
bbub  Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:bbub00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:bbub01009]
    102404979 (TRIM42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bbub04121]
    102404979 (TRIM42)
Protein phosphatases and associated proteins [BR:bbub01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102404979 (TRIM42)
Ubiquitin system [BR:bbub04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    102404979 (TRIM42)
SSDB
Motif
Pfam: zf-B_box fn3 Pur_ac_phosph_N Ig_DSCAM-DSCAML_C CHDCT2
Other DBs
NCBI-GeneID: 102404979
NCBI-ProteinID: XP_006061669
LinkDB
Position
1:complement(173149108..173180171)
AA seq 725 aa
MDTAMCVCSPCCTWQRCCPRLCSCLCCKFLFTSERNCTCFPCPYKDERNCQFCHCTCSEN
PNCHWCCCSWANDPNCKCCCTASSNLKCYYYESRCCRNATITFRKGRLRSIRTSSKTALR
IGSSDTQLEEVKMMPTANSNLVSHLSCPICGRLRLHSFMLPCHHSLCEKCLRRLQKHAEV
TENFFILICPVCNRSHCMPYSHKMQLPENYLRGRLTKRYMQQHGYLKWRFDRSSGPIVCQ
VCRSQRIAYKRCLTCRLNLCNECLKTFHSDVAMQDHVFVDTSTEDQDEKICIHHPSSRII
EYCRNDNELLCGFCKTSLHNGHDTISLIDACSERAAALFSAIAKFKAVRYEIDNDLMEFN
ILKNSFKADKEVKRKEIRNGFLKLRSILQEKEKTIMEQIENMEVSRQKEIEKYVYVTTMK
VNEMDGLIAYSKEALKETGQVAFLQSAKILVDQIEDGIQSTYRPDPQLRLHSLNCMPLDF
AELSSAIHELFPTGPKKVCSSGDSLPSPYPLQSEMMIARKVTFSTHSFNNQQIYQRSSSL
LSFNAPACEKTKIGLEAYGRAQSAAPAKPTDGLYTYWSAGVENQPVQNSNSFHNWYSFND
SSVQTPGPIIIYQTLVYPRAAKVYWTCPTEDVDSFEMEFYELITSPPNNVRTELCGQIRD
IMQQNLELHNLTPNTEYLFKVRAINDNGPGQWSDICKVVTPDGRGKNRAKWGLLKNIQTA
LQKRF
NT seq 2178 nt   +upstreamnt  +downstreamnt
atggataccgctatgtgtgtttgttctccatgttgtacatggcagagatgttgtccgcgg
ctatgctcctgcctgtgctgcaagttcctcttcacctcggagcggaactgcacctgcttc
ccctgcccttacaaagatgagcgcaactgccagttctgccactgcacctgctccgagaac
cccaactgccactggtgctgctgctcctgggccaatgaccccaactgtaagtgctgctgc
acggccagcagcaacctcaagtgctactactacgagagccgctgctgccgcaatgccacc
atcaccttccgcaagggccgcctccggagcatccgcacctcctccaagacggcgctgcgc
atcgggagcagcgacacgcagctggaggaggtgaagatgatgccgacggccaacagcaat
ctggtcagccacctgtcgtgccccatctgcggccgcctgcgcctgcactccttcatgcta
ccctgccaccacagcctgtgtgagaagtgcctgcggcggctgcagaagcatgccgaggtc
accgagaacttcttcatcctcatctgcccggtgtgcaaccgctcgcactgcatgccctac
agccacaagatgcagctacccgagaactatctgcgcggccgcctcaccaagcgctacatg
cagcagcatggctacctcaagtggcgcttcgaccgctccagcgggcccattgtctgccag
gtctgccgcagccagcgcattgcctacaagcgttgcctcacctgccgcctcaacctgtgc
aacgagtgcctcaagactttccactcggacgtggccatgcaggaccacgtgttcgtggat
accagcacggaggaccaggacgagaagatctgcatccaccacccgtccagccgcatcata
gagtactgccgcaacgacaacgagctgctctgcggcttctgtaagacctccctccacaac
ggccacgacaccatcagcctcatcgacgcctgctcggagagggctgccgcgctcttcagc
gccatcgccaagttcaaagcagtccgctatgaaattgataatgacctcatggaattcaat
attttaaaaaacagctttaaagctgacaaggaggtaaagcgaaaagagatcagaaatgga
tttctcaagctgcgcagtattctccaggagaaagagaaaaccatcatggagcagatagag
aatatggaggtgtccaggcagaaggaaattgaaaagtatgtgtacgtcactaccatgaag
gtgaacgaaatggatggtctgattgcctactccaaggaggcgctgaaggagacaggccaa
gtggcattcctgcagtcagccaagatcctggtggaccagatcgaggatggcatccagagc
acttacaggcccgacccacagctccggctacactccttgaactgcatgcccttggacttc
gctgagctctccagtgccattcacgagctcttccccacaggacccaagaaggtgtgttcc
tctggggactccctgccatccccctatcccctgcagtcagaaatgatgattgccaggaag
gtcactttcagcacccacagcttcaacaaccagcagatataccagcgaagctcctcctta
ttgtccttcaatgcccctgcctgtgagaagaccaagataggtctggaagcctatgggcga
gcccagtcagctgcacctgccaagcccacagatggcctctatacctactggagcgcaggg
gtagaaaaccagcctgtgcagaatagcaatagcttccataactggtactcattcaacgat
agctctgtgcagactccaggcccaattattatctaccagactctggtgtatccaagagct
gccaaggtttactggacatgcccaacagaagacgtggactcttttgagatggaattctac
gaactcattacttcccctcctaacaatgtgcggacagagctctgtggacaaattcgggac
ataatgcagcagaatctggagctacacaacctgacccccaacaccgagtatctgtttaaa
gtgcgagccatcaatgataatggtcctgggcagtggagtgacatttgcaaggtggtaaca
ccagatgggcgcggaaagaaccgagctaagtggggcctgctgaagaatatccagactgcc
ctccagaaacgcttctga

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