Bubalus bubalis (water buffalo): 102404980
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Entry
102404980 CDS
T05912
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
102404980 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbub03036
]
102404980 (ERCC6)
03400 DNA repair and recombination proteins [BR:
bbub03400
]
102404980 (ERCC6)
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
102404980 (ERCC6)
DNA repair and recombination proteins [BR:
bbub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
102404980 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
102404980
NCBI-ProteinID:
XP_006061922
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All DBs
Position
4:complement(162752759..162824567)
Genome browser
AA seq
1481 aa
AA seq
DB search
MPNERIPYSSQTQEPDCSRSQDVSGSEEGTIKQEEDGDMDLGQSLPSCSSANGPSTSTEG
CLLELPRRGPALLHIDRHQIQAVEPSAQALELQGLGVDVYDQDVLEQGVLQQVDSAIHEA
NCVAQLAEAEKEYRSVLDDLTSCTTSLRQIDKIIEQLGPQAATNKDINRKLDSVKRQKYN
KEQQLKKITAKQKRLQAILGGAEVKVELGHGSLEEEDAEAAPSCLGSMLMPAQETAWEEL
VRTGQMTPFGTKIPQKQEKKPRKLMLNEASGFEKYLADQAKLSFERKKQACNKRTAKKAS
ASATSELSSALNENKPGERGKVVSKTDKRLKKQIKKLQKRALQLQGQVGLLKGKKPWDCD
VRPKAQGDSEGEESEYLPTEDELEETVGADLPGEGADCEQRLALNCRKRQKKVTVQEVDD
DFFPSSGEEAEATGGGRKVVRCRDDGDEDYYKQRLRRWNKRRLKDKEKSLRLEDDSEESD
AEFDEGFKMPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLS
YSKIRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAVLHETGSFTHKKEKL
VRDIAHCHGILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAITLACKQFRTPHR
IILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKC
ACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILN
GEMQIFSGLVALRKICNHPDLFSGGPKNLKGIPDEELEEDQFGYWKRSGKMIVVESLLKI
WHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLITRYNEDTSIFVF
LLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEE
KIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLSSPDTSQSTETSAIFAGTGSDVQ
TPKRHLKRRLQQACGTDQNVPVDKQFPDCKTSANAAMSSEEVSAALVNDVNAVTSDQGIP
LNDAIQTPHSLTSSERLGEEADTVSRPRESSVIHENGDSSDSPRISRMCGMSGEESINEK
ESLSDKRESCQVQREALWENEQMENNFYKHKSKMKHHVAEEPMEKHLRPNQKPKSSKHRR
DAKFEGTRIPHLVKKRQYRRRDPETESEAKERSHDDYVLEKLFRKSVGVHSVMKHDAIMD
GASPDHVLVEAEANRVAQDALRALRLSRQQCLGAASGVPTWTGHRGLAGAPAGKKSRFGQ
KRNSSFSVQRPSSTSPKEKCQDSTVKKEGKDHVSEHFSGKAEDTESSSGALTSSSLLAKM
RARNHLILPERLESESGRLPEATAPLPCSTEHDDLLVEMRNFIAFQAQADGQASTREILQ
EFESKLSASQSCVFRELLRSLCTFHRTSAGEGIWKLKPEYC
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatgaaagaatcccctactcaagtcaaactcaggagccagactgttcacggagc
caggatgtcagtggcagtgaagaggggacaattaagcaggaggaggatggcgacatggat
ctggggcagagcctcccctcttgttcctctgctaatggaccctccacttccaccgaaggg
tgtctcttggaacttcccaggagagggccagccctgctgcacatcgacagacatcagatc
caggcggtggagcccagtgcacaggccctggagctgcaggggttgggtgtagatgtctac
gaccaggatgtgttggagcaaggggtgcttcagcaggtggacagcgccatccatgaggcc
aactgtgtggcccagctcgccgaggcggagaaggagtatcggtcagtcctggacgacctc
acgtcatgtacgacatccttaagacagattgataaaattattgaacaacttggccctcaa
gctgccaccaacaaagatatcaacaggaaactagattctgtaaaacgacagaagtataac
aaggaacaacagctgaagaagatcacggcaaaacagaagcgactccaggccatccttgga
ggagcagaggtgaaagtggaactaggtcacggcagtctggaggaggaggatgcagaagca
gcgccgtcctgccttggcagcatgctcatgcccgctcaggagaccgcttgggaagagctc
gtccgcactggtcagatgacaccttttggtaccaagatccctcagaagcaggagaaaaag
cccagaaaactaatgctcaatgaagcatcaggctttgaaaagtatttggcagatcaagcg
aaactgtcctttgaaagaaagaagcaagcttgtaataaaagaacagctaaaaaagcttcg
gcctcggccacttctgaactgagctcagcactcaatgaaaacaaaccaggcgagagaggc
aaagttgtatcgaaaacagataaacgcctgaaaaaacaaatcaagaaactccagaagagg
gctcttcagctccaggggcaggtcggattgctaaagggaaagaaaccctgggattgtgat
gtgagaccaaaggcacagggggactctgagggtgaagagtctgagtacttgcccacggag
gacgagctggaagagacggtgggtgctgacctgcccggggaaggtgctgactgcgagcag
aggctggcgctcaattgccggaaacggcagaagaaagtcactgtgcaggaggtcgatgat
gacttttttccaagttctggggaagaagctgaagccacgggaggaggccggaaagtagtg
agatgccgagacgatggagatgaagattattataagcagcgattaaggagatggaataaa
cggagactgaaggacaaagagaagagtttgagacttgaagatgattctgaggaaagcgat
gctgaatttgacgaaggttttaaaatgccgggttttctgttcaaaaagctttttaagtac
cagcagacaggtgttaggtggctgtgggaattgcactgccagcaggcaggaggaattctg
ggagacgaaatgggattgggcaagaccatccagataattgccttcttggcaggtctgagc
tacagcaagatcaggactcgtggttcaaattacaggttcgaggggttgggtccgaccata
attgtctgtccgacgacggtgatgcatcagtgggtgaaggaatttcacacgtggtggcct
ccattcagagtggcagttctgcacgaaaccgggtcctttacccacaaaaaggagaaacta
gttcgagacattgctcattgtcacgggattttgatcacttcttactcctacattcgactg
atgcaagatgacattagcaggcatgactggcactatgtgatcttggacgagggacacaaa
attcgaaatccaaatgctgccatcacccttgcttgcaaacagttccgcacgcctcatcgc
atcatcctgtctggctcaccgatgcagaataacctccgagagctgtggtctctctttgac
ttcatcttcccgggaaagctgggtacattgcctgtatttatggagcagttctcagtcccc
atcaccatgggggggtattcaaacgcttccccggtacaggttaaaactgcttataagtgt
gcgtgtgtcttacgagataccataaatccatacctactgcggagaatgaagtcggatgtc
aaaatgagcctttctttgccagataaaaacgaacaggtcttattttgccgtcttacagat
gaacaacataaagtctaccaaaatttcattgattccaaagaagtttacaggattctcaat
ggagagatgcagattttctctggacttgtagccctaagaaaaatctgcaaccatcctgat
ctcttttccggaggccccaagaatcttaaaggcattccagatgaggaactagaagaagat
cagtttggatactggaaacgttctgggaaaatgatagtcgttgagtccttgctgaaaata
tggcacaagcagggccaacgagtgttgctgttttctcagtccagacagatgctggacatc
cttgaagtattcctcagagcccaaaagtattcttatctcaagatggatggcaccacggcg
atagcttccagacaaccactgattacaagatacaatgaggacacatccatatttgtgttt
cttctgaccactcgggtgggtggcctaggagtcaacctgacgggggcaaaccgcgtcatc
atctatgaccccgactggaacccaagcacagacacgcaggcccgggagcgagcgtggagg
attggccagaagaagcaggtgacggtgtacaggcttctgaccgcaggcaccattgaagaa
aagatctaccaccgacaaatcttcaagcagtttttgacaaatagagtgctaaaagatcca
aagcaaagacgatttttcaagtccaatgatctttatgagctgtttactctgagtagtcct
gatacatcccagagcactgaaacaagtgctatttttgcaggaactggttcagatgtgcag
acacccaaacgccatttaaaaagaagacttcaacaggcctgtggaacagaccagaatgtc
ccagtggacaaacagttccctgattgtaagacgtccgcaaatgctgccatgtcatctgaa
gaggtatctgcagcattggtcaatgacgtgaatgcagtaacttctgaccaaggcattcct
ctgaatgatgccattcagacacctcatagtctaaccagcagtgagaggcttggagaagag
gcagacacagtctccagaccacgggagtcctcagtgattcatgaaaatggggacagttca
gattccccaagaatcagcagaatgtgcgggatgtctggtgaggaaagcatcaatgaaaag
gagagtctttctgataaaagagaaagctgccaggttcagagagaagctctttgggagaat
gagcaaatggaaaataatttttataagcacaagtcgaaaatgaaacatcacgtggcagaa
gagcccatggagaaacacctgaggccgaatcagaagccgaagagctctaagcaccgcaga
gacgccaagtttgagggaactcgaattccacacctggtgaagaagaggcagtaccggagg
cgagaccctgaaactgagagcgaggccaaggagcgcagccacgacgactacgtcctggag
aagcttttcagaaagtcagtgggtgtgcacagcgtcatgaagcacgacgccatcatggac
ggagccagtccagaccacgtcctggtggaggcggaggccaaccgcgtggctcaggacgcc
ctcagagctctgagactgtctcggcagcagtgtctgggagcagcgtctggtgtccccacg
tggactggccacagagggcttgctggtgcaccagcaggaaaaaagagcagattcggtcag
aagaggaactccagtttctctgttcagcgtccctcttcaacatctccaaaggagaaatgc
caggacagcactgtgaagaaggagggaaaagatcatgtttcggagcattttagtggaaaa
gctgaagacacagagtcttcatccggggctctcacttcgtcctcactgttggcgaaaatg
agagctagaaaccacctgattttgccagagcgcttagaaagtgaaagtgggcgcctccca
gaagccactgctccgctgccctgcagcacagaacacgatgacctgctggtggaaatgaga
aacttcattgcctttcaggcccaagccgatggccaggccagcacccgggagattctgcag
gagtttgagtccaagttatcagcatcacagtcttgtgtctttagagaactcttgagaagt
ctgtgcacttttcatagaacttctgctggcgaaggcatttggaaactcaagccagaatac
tgctga
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integrated database retrieval system
