Bubalus bubalis (water buffalo): 102405070
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Entry
102405070 CDS
T05912
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X8
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03013
Nucleocytoplasmic transport
bbub03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102405070 (SRRM1)
03015 mRNA surveillance pathway
102405070 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102405070 (SRRM1)
03041 Spliceosome [BR:
bbub03041
]
102405070 (SRRM1)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102405070 (SRRM1)
Spliceosome [BR:
bbub03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
102405070 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
BAF1_ABF1
Motif
Other DBs
NCBI-GeneID:
102405070
NCBI-ProteinID:
XP_044794046
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All DBs
Position
2:complement(180319613..180348702)
Genome browser
AA seq
898 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATS
TSDILKVPKTEPVLEPKEPSPEKNSKKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRH
RSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSS
SSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNR
TRKSRVSVSPGRTSVTKHKGTEKRESPSPAPKPRKVELSESEDKGGKMAAADSVQQRRQY
RRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKEASPRGR
RRRSPSPPPARRRRSPSPAPPPRRRRSPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYS
PSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSS
PSRSAREARSPQPNKRHSPSPRPRAPQTSSPPPARRGASSSPQRRQSPSPSSRPIRRVSR
TPEPKKIKKVASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPV
KKAKSPTPSPSPARNSDPEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAVAAAAAAAVA
PAAAAAPTTTSAQEEPEAEPEPKKETESEAEDNLDDLEKHLREKALRSMRKAQVSPQS
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcagaacaggataatcggttcagcaacaaa
cagaagaagctactgaagcagctgaaattcgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaacgagtaacggaaatcctt
gggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gattcgaaaatgatgcaaatcaacctgaccgggtttttgaatggaaaaaatgctagagaa
tttatgggagaactgtggcccctactcttaagtgcacaagaaaacatcgctggaatccct
tctgctttcctagaactgaagaaggaagaaataaaacagagacagattgaacaagaaaag
ttggcatctatgaaaaagcaagatgaggacaaggataagagggataaagaagaaaaagaa
agcagcagagaaaaaagggagcggtctcgaagcccaagaagacgcaaatccagatctcct
tcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtcattctcgatct
ccccgtcacagaaccaaaagccggagtccttcccctgctccagagaagaaggaaaaaact
ccagagctcccagagccatcagtgaaagtaaaagaaccttcagtacaagaggccacttct
acaagtgacatcctgaaagttcccaagactgaaccagtactagagcctaaagaaccttct
ccagagaaaaactccaaaaaggaaaaggaaaagacccgaccaagatctcggtcacgttcc
aagtcaagatcccggacacgttctcgctcaccttctcatactagaccaagaaggcgccat
agatctcgatcaagatcatactcacctagaaggcggccaagcccaagaagacggccatct
cctcgaagaagaaccccgccgagacgaatgcctcctccaccaaggcacaggaggagtaga
tctccagtgagacgaagaaggcgttcatcggcatccttgtctgggagtagttcatcatca
tcatcatctcgttcccggtcaccgccaaagaagcctccaaagaggacatccagccctcct
cgaaaaactcgtaggttatctccttctgcaagtcctccgaggcgaaggcataggccatca
cctccagctactccaccgccaaaaactcgtcattccccaacaccccagcagtcaaaccgt
acaaggaaaagtcgtgtttctgtctctccagggagaacttcagtgacaaaacataaaggt
actgagaaaagagaatccccttcaccagcaccgaagcctcggaaagtggagttatctgaa
tcggaagataaaggtggcaaaatggctgcagcagattctgtgcagcagagacgccagtat
agacgacagaaccagcagtcttcatctgattctggctcctcctcttcctcagaagatgaa
cgacccaaaaggtcccatgtgaagaatggtgaggtaggcaggcgacggagacattcccct
tcccggagtgcctctccatcacctcgaaagcgccagaaagaggcttcccctcgtggtaga
cggaggagaagtccctccccacctcccgccagaaggcgacgttctccttctcctgctcct
ccacctcgtcgacgcaggtctcccacaccaccaccacgacgaaggactccgtctcctcct
ccacgtcgtcgctcaccttccccaagaagatactctcctccaatacagaggagatactct
ccttctccacctccaaagagaagaacggcttcgccccctccccctcctaaacgaagggca
tcaccatctccaccaccaaagcgtcgggtctcccattcaccaccccccaaacaaagaagc
tccccagtcaccaagagacgttcgccttcattgtcatcaaaacataggaaagggtcttcc
ccgagccgatctgcccgggaggcccggtcaccacagccaaacaaacggcattcgccctca
ccacggcctcgcgctcctcagacctcaagtcctccacctgctcgaagaggagcatcatca
tcaccccaaagaaggcagtccccatctccaagttctaggcccattaggagagtctccagg
actccggaacccaaaaagataaaaaaagttgcctcaccaagccctcagtcggtaaggagg
gtctcatcttcccgatctgtctcgggatctcctgagccagcagctaaaaagcccccagca
cctccatcacctgtccagtctcagtcaccctccaccaactggtcaccagcggtaccggtt
aaaaaggctaaaagcccaacaccaagcccatcaccggcaaggaattcagacccagaagga
ggtggaaagaaaaagaagaaaaagaaggacaagaaacacaaaaaggataagaagcacaag
aagcacaaaaaacacaagaaggagaaggctgtagctgccgctgctgccgctgctgtggcc
cctgcagccgcagctgctcccacaaccacatcagcacaggaagaaccggaggcagagcca
gagcctaagaaggagactgaaagtgaggctgaagataaccttgatgacttagaaaagcac
ctgcgtgaaaaggccctgagatcaatgcggaaggctcaagtgtccccacagtcctag
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