KEGG   Bubalus bubalis (water buffalo): 102405523
Entry
102405523         CDS       T05912                                 
Symbol
HLTF
Name
(RefSeq) helicase-like transcription factor isoform X1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
bbub  Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:bbub00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bbub04121]
    102405523 (HLTF)
   03400 DNA repair and recombination proteins [BR:bbub03400]
    102405523 (HLTF)
Enzymes [BR:bbub01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102405523 (HLTF)
Ubiquitin system [BR:bbub04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    102405523 (HLTF)
DNA repair and recombination proteins [BR:bbub03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    102405523 (HLTF)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 DEAD zf-RING_2 zf-RING_UBOX RING_XB3-XBAT31 ResIII zf-RING_5 zf-C3HC4_4 zf-ANAPC11 HDA2-3 zf-Nse Prok-RING_4
Other DBs
NCBI-GeneID: 102405523
NCBI-ProteinID: XP_006063188
LinkDB
Position
1:164117064..164179674
AA seq 1009 aa
MSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPRFEFQDIIPPDDFLTSDEELDSVLF
GTLRGHVVGLRYYTGVVNNNEMVALQREPTNPYDKNAIKVNNVNGNQVGHIKKDLAAALA
YIMDNKLAQIEGVVPFGANNTFTMPLQMTFWGKEENRKAVLDELKKHGFKLGPAPKSLGF
SLESGWGSGRAGPSYSMPVHTAVQMTTEQLKTEFDKLFEDLKEDDKTQEMEPAEAIETPL
LPHQKQALAWMVSRENSEELPPFWEQRSDLYYNTITNFSEKDRPENVHGGILADDMGLGK
TLTAIAVILTNFHDGKSLPVERIKKNQLKKECNVYDESMELGGNNTSEKAAGLIKGSRCS
GEPSISDVKGKNKYPKSEFSSSRSKRRKPAAVQYTESSDSEEVEPSELPQKMKGKLKRTQ
SETKIRVKAGSSKVQEDAEFACALTSSTPVTKKKMLKRGASAVESSKKTDVEDKPRTTLI
ICPLSVLSNWMDQFGQHIKSDVHLNFYVYYGPDRVRDPTLLSKQDIVLTTYNILTHDYGT
KGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLEAERRWVLTGTPIQNSLKDLWSLL
SFLKLKPFVDREWWHRTIQRPVTMGDEAGLRRLQSLIKNITLRRTKTSKIKGKPVLELPE
RKVFIQHITLSDEERKIYQSVKNEGKATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTH
LLANAVSSSGPSGNDTPEELRKKLIKKMKLILSSGSDEECAICLDSLMAPVITHCAHVFC
KPCICQVIQNEQPHAKCPLCRNDIHGDSLIECPPEELACNTEKKSNMEWTSSSKINALMH
ALIDLRKKNPNIKSLVVSQFTTFLSLIETPLRSSGFVFTRLDGSMAQKKRVESIQCFQNT
EAGSPTIMLLSLKAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKF
IVKDSVEENMLKIQNTKRELAAGAFGTKKTNASEMKQAKINEIRTLIDL
NT seq 3030 nt   +upstreamnt  +downstreamnt
atgtcctggatgttcaagagagatcctgtttggaagtacttgcagactgtccagtatgga
gtccatggaaattttccacgcctctcatatccaactttctttcctcgttttgaatttcaa
gatattattcctccagatgacttcctaacaagtgatgaagagttagattcagttttattt
ggaactttgagaggccatgtcgttggactacgctattacacaggagtagttaataataat
gaaatggttgcattacaacgagagccgactaacccgtatgataagaatgcaattaaagta
aacaatgtgaatggaaatcaggttggtcatataaagaaagatcttgcagctgccttggcc
tatatcatggacaacaaattggcacaaattgaaggggtagttccttttggtgcaaacaat
acttttaccatgcctctgcaaatgacattttggggaaaagaagaaaatagaaaagcagtt
ttagatgagttaaagaaacatggatttaaattgggacctgcaccaaaatctttagggttc
agtttggaaagtggttggggctctggaagagctggaccaagctacagtatgccagttcat
actgcagtacagatgacaactgaacagcttaagactgagtttgacaaattgtttgaagat
ttaaaagaagatgataaaactcaggaaatggaaccagctgaggctattgaaacaccattg
cttccacatcaaaaacaagctctagcttggatggtttcacgggaaaacagtgaagaactt
ccgccattctgggaacagcgaagtgacttatactataacacaataacaaatttttctgaa
aaggaccgaccagaaaatgttcatggaggaattttagctgatgatatgggtttgggcaaa
actctgacagccattgcagtgattctcaccaacttccatgatggcaagtctcttcctgtt
gaaagaattaagaaaaatcaactgaagaaggaatgtaatgtttacgatgaatctatggaa
cttggaggaaacaataccagtgaaaaggcagctggactaatcaaaggatctagatgtagt
ggagaacccagtatttcagatgtcaagggaaagaataaatatcccaagtcagaattctct
agctcccgctccaaaaggagaaaacctgctgctgtacagtacactgaaagtagtgattca
gaggaagttgaaccaagtgaattgccacagaaaatgaaaggcaaactgaaaagaacacaa
tcagagactaaaatcagagtaaaagcaggatcttctaaggttcaagaagatgcagaattt
gcatgtgcacttacttcatctacccctgtaacaaaaaagaaaatgttgaaaaggggggca
tctgcagtggagagttcaaagaaaactgatgttgaagataaaccaagaacaacactgatc
atctgtccactttctgtattaagcaactggatggaccagtttggacaacacataaaatca
gatgtgcacttgaatttttatgtttattatggtcctgatcgtgttagagacccaacattg
ctttcaaaacaggatattgttttgacgacatacaatattttaactcatgactatggtact
aagggtgatagtccattacatagcataaggtggctaagagtgatcctggatgaaggacat
gccatacggaatccaaatgctcagcaaacaaaagctgtacttgatttagaagcagaaaga
agatgggttttgacaggcactccaattcagaattctttaaaggacttgtggtctcttctt
tcctttttaaaacttaaaccatttgttgatagagaatggtggcatagaacaatacagcgt
cctgtcacaatgggagacgaagctggacttaggcgtttgcagtccctaattaaaaatatt
acacttagaagaacaaagacaagcaaaattaaaggaaaacctgttttggagttaccagaa
cgtaaagtatttattcagcacattacactttcagatgaagagagaaagatttaccagtct
gtgaaaaatgaaggcaaagctactattggaaggtattttaatgaagggactgtccttgca
cactatgcagatgtcctgggtcttttgcttagattgcggcagatttgttgtcatacacac
cttcttgcaaatgcagtgtcttccagtggtccctcagggaatgatacacctgaagaacta
cgaaagaagttaataaagaagatgaagttaattctaagctcaggttctgatgaagaatgt
gcaatttgcttggattctttaatggcccctgtcataacacattgtgcacatgtcttctgt
aaaccttgtatttgccaagtcattcagaatgagcagcctcatgctaaatgccctttatgc
agaaatgatatacatggagacagtttaatagaatgtcctccagaagaattggcatgcaac
actgagaaaaagtctaatatggaatggacatccagttcgaagattaatgctctaatgcat
gcattgattgatttaagaaagaagaaccccaacataaaaagtttagttgtttctcagttt
acaacatttctgtctttaatagaaacacccctcagatcctctggatttgtatttactcgt
ttggatggttccatggcccaaaaaaaaagagttgaatcaattcagtgttttcaaaacact
gaagcagggtctccaactataatgcttctatccttaaaagcaggtggagttggtttgaat
ctttctgcagcttctcgagtttttttaatggatccagcctggaatccagctgctgaagat
cagtgctttgacagatgccatagacttggccagaagcaagaagttattatcacaaaattc
attgtgaaggattctgttgaagaaaacatgctgaaaatacaaaacacgaagagagaactt
gcagctggagcctttggaactaagaaaacaaatgcgagtgaaatgaaacaagctaaaatc
aatgaaatcagaactttaattgatttataa

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