Bubalus bubalis (water buffalo): 102405525 Help Entry 102405525         CDS       T05912                                  Symbol DCHS1 Name (RefSeq) protocadherin-16   KO K16507   protocadherin-16/23 Organism bbub  Bubalus bubalis (water buffalo) Pathway bbub04392   Hippo signaling pathway - multiple species Brite KEGG Orthology (KO) [BR:bbub00001]  09130 Environmental Information Processing   09132 Signal transduction    04392 Hippo signaling pathway - multiple species     102405525 (DCHS1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:bbub04515]     102405525 (DCHS1) Cell adhesion molecules [BR:bbub04515]  Cadherins   Cadherin related    102405525 (DCHS1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_CELSR2_9th Cadherin_4 Cadherin_pro Motif Other DBs NCBI-GeneID:  102405525 NCBI-ProteinID:  XP_025122335 LinkDB All DBs Position 16:complement(38826967..38863554) Genome browser AA seq 3296 aa AA seqDB search MQKEWATAPSCPGMQIPRPLPLLSLLMLLLLGAGAPGAWGQAGSLDLQIDEEQPAGTLIG DISAGLPAGTAAPPMYFISAQEGSGVGTDLAIDEHSGVVRTARVLDRERRDRYRFTAVTP DGATVEVTVRVADINDHAPAFPQARAVLQIPEHTALGTRYPLEPARDADAGRLGTQGYAL SGDGAGETFRLETRPGPDGAPVPELVVTGELDRENRSHYMLQLEAYDGGSPPRRAQALLD VTLLDINDHAPAFNQSRYHAAVSESLAPGSPVLQVYASDADAGANGAVTYEINRRQSEGD GPFSIDAHTGLLRLERPLDFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSM TVIFLSADGSPRVSEAAPPGQLVARISVSDPDDGDFAHVNVSLEGGEGHFALSTQDSVIY LVCVARRLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYRPEPL PEVALPGSFVVRVTARDPDQGTNGQVTYSLAPGAHTRWFSIDPASGIVTTAALLDYELEP QPQLIVVATDGGLPPLSSSATVSVVLQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTA TDADSGPFGLLSYSLGAGLGTSGSPPFRIDAHSGDVCTTRTLDRDQGPSSFDFTVTAVDG GGLKSMVYVKVFVSDENDNPPQFYPREYAASLSAQSAPGTAVLRVRAHDPDQGPHGRLSY HILAGNSPPLFALDEHSGLLTVAWPLARRASSMVQLEIGARDGGGLQAEPSARVNISIVP GTPVPPVFEQLQYVFSVPEDVAPGTSVGAVQAHNPPGRLGPVTLALSGGDPRGLFSLDGA TGLLQTLRPLDRELLGPVLELEVRAGSGVPPAFAVARVRVLLDDVNDNSPAFPAPEDTVL LPSSTAPGTLIYTLRALDPDSGVNSRVTFTLLAGGGGAFTVDPTTGHIRLMGPLGPPGGP AHELELEARDGGSPPRTSHFRLRVVVQDLGTRGLAPHFDSPTYRVDLPSGTTPGTQVLQV QARAPDGGPVTYHLAADGPGSPFGLEPQSGWLWVRAALDHEAQELYTLKVMAVSGSKAEL GQQTATATVRISILNQNDHSPRLSEEPTFLAVAENQPPGTSVGRVFATDRDSGINGRLTY SLRQLSEDSKAFRIHPQTGEVTTLQTLDRERQSSYQLLVQVQDAGSPPRSTTGTVHIAVL DLNDNSPTFLQASGAAGGGLPIQVPDGVPPGTLVTTLQAKDPDEGENGTILYMLTGPGSE LFSLHPHSGELLTAAPLIRAERPHYVLTLSAHDQGSPPRSSSLQLLVQVLPSTRSVEPPP EPSEPDPVAPVPVVLTVTAAEGLRPGSLLGSVAPPEQAGVGALTYTLVGGADPEGTFALD AASGRLYLARPLDFETGPAWRALTVRAEGPGGAGARLLRVQVRVQDENEHAPAFARDPLA LALPENPEPGATLYTFRASDADGPGPNSDVRYRLLRQEPPVPALRLDARTGALSAPRGLD RETTPALLLLVEATDRPANASRRRTARVSARVFVTDENDNAPVFASPSRVRLPEDHPPGP TALHVVARDPDLGEAARVSYRLAAGADGCFRLHPSTGALSVVRSLDREQRAEYVLTVVAS DHGSPPRSATQLLTVSVADVNDEAPAFQQQEYSVLLRENSPPGTSLLTLQATDPDLGANG QVTYGGISGENFSLDPDTGVLTTLRALDREEQEEINLTVYARDGGSPPLLTHVTVRVAVE DENDHAPTFGSAHLSLEVPEGQDPQTLTTLRASDPDVGANGQLQYRILDGDPSGAFVLDL ASGEFGTMRPLDREVEPAFQLQIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPSYSV EVPEDAPAGTLLLQLQAHDPDAGANGRVTYYLGTGAAGAFLLEPSSGELRTATTLDREQC PSYAFTVNAVDSAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGPVFSTPILP LATLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVSRSPVSLSPRDRVLFIVATD LGRPARSATGVVIIGLQGESEHGPRFSRASSEAMLRENAPPGTPVVSPKAIHAGGSSGPI TYSILSGNEKGTFSIQPSTGAITVRSAEGLDFEANPRLRLVLQAESGGAYAFSVLTLTLQ DANDNAPRFLQPHYVAFLPESRPLEGPLLQVEADDLDQGPSGQISYSLAASQPARGLFHV DPATGTITTTAILDREIWAETRLVLMATDRGSPALVGSATLTVMVIDTNDNRPTIPQPWE LRVSEDALLGSEIAQVTGNDVDSGPVLWYVLSPSGPQDPFSVGRYGGRLSLTGPLDFEQR DRYHLQLLAHDGPHEGRANLTVLVEDVNDNAPAFSQTLYQVMLLEHTPPGSAILSVSATD RDSGANGHISYHLASPAEGFSIDPNNGTLFTTVGTVPLGHEGPGVVDVVLEARDHGVPGR AARATVHVQLQDQNDHAPSFTLPHYRVAVTEDLPPGSTLLTLEATDADGSRSHATVDYSI VSGNRGRVFQLEPRLAEAGESDGLGPRALGCLVLLEPLDFESLTQYNLTVAATDRGQPPR SSAVPVTVSVLDVNDNPPVFTRAAYRVAVPEDTPVGAELLHVEASDADPGPHGLVRFTLS SGDPLGLFELDESSGDLRLARPLDCETQARHQLVVQAADPAGAHFALAPVTIEVQDVNDH GPAFPLSLLSTSLAENQPPGTLVTTLHAIDGDAGAFGRLHYSLLEAGPGPEGREAFALNS STGELRARVAFDYEHTGSFQLLVGATDAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQV PEGARRGHSLGHVQATDEDGGADGLVLYSLAASSPYFGINQTTGALYLRVDSRAPGSGTG TSGGGGRTRREAPRELRLEVVARGPLPGSRSATVPVTVDITHTALGLAPDLNLLLVGAVA ASLGVVVVLALAALVLGLVRARNRKAEAAPGPMSQAAPLASGSLQKLGREPPSPPPSEHL YHQTLPSYGGPGAGGPYPRGGSLDPSHSSGRGSAEAAEDDEIRMINEFPRVASVASSLAA RGPDSGIQQDADGLSDTSCEPPAPDTWYKGRKAGLLLPGAGATLYREDGPPATATTFLGG CGLSPAPTGDYGFPADGKPCVAGALTAIVAGEEELRGSYNWDYLLSWCPQFQPLASVFTE IARLKDEARPCPPAPRIDPPPLITAVAHPGAKSVPPKPASTAATRAVFPPASHRSPISHE GSLSSAAMSPSFSPSLSPLAARSPVVSPFGVAQGPSASALSAESGLEPPDDTELHI NT seq 9891 nt NT seq  +upstreamnt  +downstreamnt atgcagaaggagtgggccactgcaccttcgtgcccgggcatgcagatccccaggcccctc cccctgctgtcattgctgatgctgctgctcctgggggcaggggcgccaggtgcctggggt caggctgggagcttggacctgcagattgatgaggagcagccagcgggcacgctgatcggg gacatcagtgcagggcttccagcgggcacagcagcacctcccatgtacttcatctctgcc caggagggcagcggggtgggcacagacctggccatcgatgaacacagtggggtggtccgt acagcccgtgtcttggaccgcgagcggcgggatcgctaccgcttcactgcagtcactccc gacggtgccactgtggaagttaccgtgcgagtggctgacatcaatgaccatgctccggct ttcccacaggctcgggctgtcctgcagataccagagcatacagcacttggcacccgctac ccattggagcctgctcgtgatgccgacgctggccgcctgggaacccagggctatgccctg tctggtgatggggctggtgagaccttccggctggagacacgccctggtccagatggggcc ccagtgcctgagctggtagttaccggagagctggaccgagagaaccgctcacactacatg ctgcaactggaggcctatgacggtggttcaccccctcggagggcccaggccctgctggac gtgacactgctagacatcaatgaccatgccccagctttcaatcagagccgctaccacgct gctgtgtccgaaagcctggcccccggcagtcctgtcttgcaggtgtatgcctccgatgcc gatgcaggtgccaatggggctgtaacttatgagatcaaccggaggcagagcgagggtgac ggacccttctccattgatgcacacacggggctgctgcggctggagcggccgctggacttt gagcaacgtcgggtccacgaactggtggtgcaggctcgggatggaggggctcaccctgag ctgggctcggcctttgtgaccgtgcatgtgcgagatgccaatgacaatcagccctccatg actgtcatcttcctgagtgcagatggctccccccgtgtatctgaggctgcccccccgggc cagcttgttgctcgaatctctgtgtcagacccagatgatggtgactttgcgcatgtcaac gtgtccctggagggtggagagggccactttgcgctcagcacccaggacagcgtcatctac ctggtgtgtgtggctcggcggctggatcgggaggagcgcgatgcctacaacttgcgagtt actgccacagactcaggctcacccccactgcgggctgaggctgcctttgtgctacacgtc acagatgtcaatgacaatgcgcctgcctttgaccgccagctctaccgacccgagcctctg cctgaggttgccctgcctggcagcttcgtggtgcgggtgacagcccgggatcctgaccag ggcaccaatggtcaggtcacctacagcctggccccaggcgcccacacccgctggttctcc atagaccccgcctcaggcattgtcactacagctgctttgctggactacgaattggaacct cagccacagctaatcgtggtggccacggatgggggcttgccccctctctcctcctctgcc acagtgagcgtggtcttgcaagatgtgaatgataacgagccgcagttccagaggactttc tacaatgcctcgctgcctgagggcactcagccaggaacctgcttcctgcaggtgacagcc acagatgcagacagtggcccatttggcctcctctcctattccttgggtgccggacttggg acctcagggtctcccccgttccgcatcgatgcccacagtggtgacgtgtgtacgacccgg accctggaccgcgatcaggggccctcaagctttgacttcacagtgacagctgtggacggg ggaggcctcaagtctatggtatatgtgaaggtgtttgtgtcagacgagaatgacaaccca cctcagttttatccacgggagtatgccgccagtctgagcgcccagagtgcaccaggcaca gctgtgctgagggtacgtgcccatgaccctgatcagggaccccatgggcgactctcctac cacatcctggctggcaacagccccccgctctttgccttggacgagcactcaggactattg acagtagcctggcccttggccagacgggccagttccatggtgcagctggagattggggct cgggatggaggtggcctgcaggcggagcccagtgcccgagtcaacatcagcattgtgcct ggaactcctgtaccaccagtatttgagcagcttcagtatgtcttttctgtgccagaggat gtggcaccaggcaccagtgtgggcgcagtccaggcacacaatccaccaggtcgcttgggg cctgtgaccctcgccctatcagggggtgatccccgaggactcttctccctagatggggcc actggactgttacagacacttcgccctctggaccgggagctgctgggaccagtgctggag ctggaggtgcgggcaggcagtggagtgccgccggctttcgctgtagctcgggtgcgtgtg ctgctggacgacgtgaacgacaactcccctgccttccctgcgcctgaagacacagtgctg ctgccatcgagcactgccccagggaccctcatctatacactgcgggctctggaccccgac tcaggagttaacagtcgagtcacctttaccctgcttgctgggggtggtggggccttcact gtggaccccaccacaggccacatacggcttatgggacctctggggcctccgggggggcca gcccatgaactggagctagaagcccgggatggaggctccccacctcgcaccagccacttt cgactgagggtggtggtacaggacttggggacccgtgggctggctccccacttcgacagc cctacctaccgtgtagacctgccctcaggcaccactcctggaactcaagtcctacaagtg caggctcgagcaccagatgggggccctgtcacctaccaccttgcagcagatgggccaggt agcccctttggcctggaaccacagagtggatggctgtgggtgcgggcagcactggaccat gaggcccaggagttgtacacactgaaagtaatggcagtgtctggatccaaagctgagttg gggcagcagacagccacagccaccgtgaggatcagcatcctcaaccagaacgaccacagt ccccgcttgtctgaggagcccaccttcctggctgtggctgagaaccagcccccagggaca agcgtgggtcgggtctttgccactgaccgagattcaggaatcaatggacgtctgacctac agcctgcgacagctgtcagaagacagcaaggccttccgcatccacccccagactggagag gtgaccacactacaaactctggaccgtgagcggcagagcagctaccagcttctggtgcag gttcaggatgcagggagcccaccccgcagcaccacaggcaccgtgcacatcgcagtgctt gacctcaatgacaacagccccaccttcctgcaggcctcaggggctgctggtggaggcctc cccatacaggtaccagatggtgtgcctccaggaacattggtgacaaccctgcaggccaag gatccagatgagggggagaatggaaccatcctgtacatgctaactggtcctggctcagag ctcttctccctgcaccctcactcgggagagctgctcacggcagcacccctgatccgagca gagcggccacactacgtgctgacattgagcgctcatgaccaaggcagcccccctcggagc tccagcctccagctgctagtgcaggtgcttccctccactcgctcggttgagcctccaccg gaaccctcagagccagacccggtggcgcctgtgcctgtcgtgctgaccgtgacagcagcc gaggggctccggcccggctccctgttgggctctgtggcgccgccggagcaggcgggggtg ggcgcccttacctacacactggtgggcggcgccgacccagagggcacctttgcgctggac gcggcctctgggcgcttgtacctggcgcggcccctggacttcgagacgggtccggcttgg cgcgcgctcacggtgcgcgccgaggggccgggaggcgcgggcgcgcggctgctgcgagtg caggtgcgcgtgcaggacgagaacgagcacgcgccggccttcgcgcgcgacccgctggct ttggcgctcccagagaacccggagcctggcgcgaccttgtacacattccgcgcgtccgac gccgacggccccggccccaacagcgatgtgcgctaccgcctgctgcgccaagagccgcct gtgcccgcgcttcgcctggacgcgcgcactggggcgctcagcgccccgcgaggcctggat cgggagaccactcccgctctgctgctgctcgtggaagccactgaccggcccgccaacgcc agccgccgccgcacagcacgcgtttccgcgcgcgtctttgtcacggatgagaatgacaat gctccagtctttgcctcgccctcacgtgtgcgcctccctgaggatcacccgcccgggccc acggcgctgcacgtggtagcccgggaccccgacctgggcgaggccgcacgggtgtcctat cgcctggcagctggcgcggacggctgtttccggctacaccccagcaccggagcgctgtcc gtggtgcggtctctggaccgcgaacagcgagctgagtacgtgctgactgtggtggcctct gaccacggctccccaccgcgctcggccacgcagcttctgactgtcagtgtcgccgacgtc aacgacgaggcacccgctttccaacagcaggagtacagcgtcctcttgcgggagaacagc ccgcctggaacatctctgctcactctgcaggcaaccgaccccgatctgggggccaacggg caagtgacttatggaggcatctctggcgaaaacttctccctggatccagacaccggggtc cttaccactcttcgggctctggatcgggaggagcaggaggagatcaacttgacagtatat gcccgggacgggggctcgcctccactgttgactcacgtcacagtgcgagtggctgtggag gatgagaatgaccatgccccaacctttgggagtgcccatctctccctggaggtacccgag ggccaggacccccagacccttaccacgctgcgggcctctgacccggatgtgggagccaac gggcagctgcagtaccgcatcctggatggggacccctcaggagcctttgtcctggaccta gcttctggggagtttggcaccatgaggccactagaccgggaggtggagccagcattccag ctgcagatagaagcccgggatggaggccagccagctctcagcgctacgcttcttgtgaca gtgacagtgctggatgccaatgaccatgccccagccttccctgtgccctcctactctgtg gaggtgcctgaggacgcacctgcagggaccctgctgctgcagctgcaggctcatgatcct gatgctggggccaatggtcgtgtgacctactacctgggtacaggtgcagcaggagccttc ctgctagagcccagctctggggaattgcgcacagccaccacccttgacagagagcagtgt cccagctatgcctttacagtgaatgcagtggacagtgcagctgctgggcccctaagcacc acagtgcccgtcaccatcacagtgcgtgatgtcaatgaccacgcgcccaccttccccacc agtcccctgaggctgcgcctgccccgcccaggccctgtcttcagcactccaattctgcct ctggccactctgcgagctgaagaccgtgatgctggtgccaatgcctccatcctgtaccgg ctggcaggcacaccacctcctggcaccaccgtggactcttacactggtgaaatccgtgtg tcccgctctcctgtatctctgagcccccgagatcgtgtcctcttcattgtggcaactgac cttggccgtccagctcgctctgccactggtgtggtcattattgggctgcaaggggagtct gagcatggaccccgcttctcccgagccagtagtgaagccatgctccgtgagaatgcaccc ccagggactcccgttgtctcccccaaggctatccatgcagggggctcaagtggacctatc acatacagcattctcagtgggaatgagaaagggacattctccatccagcctagtacagga gccatcacagtccgctcagcagaggggctggattttgaggcaaacccacggctgcgactg gtgttgcaggcagagagtggaggagcctatgctttctctgtgctgaccctaaccctgcaa gatgccaatgacaacgcgccccgcttcctgcagccccactacgtggccttccttccagag tccaggcccttggagggacccctgctgcaggtggaagcagatgacctggaccaaggcccc agtggacagatctcctacagtctggccgcatcccagccagcccggggattgttccatgta gacccagccacgggcactatcaccaccacagctatcctggaccgcgagatctgggccgaa acacggctggtgctgatggccacagacagaggaagcccagccctggtgggctcagctacc ctgacggtgatggtcatcgacaccaatgacaatcgccccaccatcccacagccctgggag ctccgagtgtcagaagatgcactgctgggctcggagatcgcacaggtaacggggaatgat gtggactcaggaccagtgctgtggtatgttctgagcccttctgggccccaggatcccttc agtgtcggccgctatggaggccgcctctccctcacgggccccttggattttgagcagcgc gaccgctaccacctgcagctcctggcacacgacgggcctcacgagggccgggccaacctc acggtgctcgtggaggatgtcaatgacaacgcccctgccttctcacagactctctaccag gtgatgctgctcgagcacacacccccgggcagtgccattctctccgtctcggccactgac cgggactcgggcgccaacggtcacatctcctaccacctggcttcccctgctgagggcttc agcattgaccccaacaacgggaccctgttcacaacagtggggacagtgcccttgggccat gaagggccaggcgtggtggacgtggtgctggaagcccgagaccacggagtgccgggtcgg gccgcccgcgccacagtgcacgtgcagctgcaggatcagaacgaccatgccccgagcttc acactgccacactatcgcgtggctgtgactgaggatctgccgcccggctccaccctgctc accctggaggccacagacgccgacgggagccgcagccatgccactgtggactacagcatt gtcagtggcaaccggggccgagtctttcagctggaaccccggctggcggaggctggggaa agtgatggactaggcccccgggccctgggctgcctagtgttgcttgagcctctagacttt gaaagcctaacccaatacaacctaactgtggcagcaactgaccgggggcagccacctcga agttcggctgtgccagtcactgtcagcgtgctggacgtcaacgacaacccacctgtcttc acccgagcggcctaccgtgtggcggtgcctgaggacacgcctgtgggagccgagctgctg cacgtggaggcctccgatgctgatccgggcccccatggccttgtacgcttcaccctcagt tcaggcgaccctctggggctctttgagctggatgagagctctggagacttgcgactggcc cgcccgttggactgtgagacccaagctcgacatcagcttgtagtgcaggctgccgaccct gccggggcacactttgctctggcaccagtgaccattgaggtccaggacgtgaatgaccat ggccccgccttccctctgagcttgctcagcaccagcctggctgagaaccagcctccaggc actcttgttaccaccctgcatgcaattgatggggatgctggggctttcggaaggctccac tacagcctgctggaggctgggccagggcccgagggccgcgaggcgtttgcactgaacagc tcaactggggagttgcgggcacgagtggcctttgactacgagcacactggcagcttccag ctgctagtgggcgctacagatgctgggaacctgtccgcctcagtcaccgtgtcagtgctg gtgaccggtgaggatgagtatgacccagtgttcctggctccagctttccactttcaggtg ccagaaggtgcacgacgtggccacagcctgggtcacgtgcaggccacagacgaggacgga ggtgctgacggcctggtgctatactcgctggccgcctcatccccctattttggtatcaac cagactacaggtgccctgtacctgcgggtggacagccgggcaccaggcagcggaacaggc acctctgggggtgggggccggacccgacgtgaggcgccacgggagctgaggctggaggtg gtggcaagggggcctctgcccggttctcggagtgccaccgtgcctgtgactgtggacatc acccacactgcgctgggcctggcacctgacctcaacctgctcttggttggagccgtggca gcctctctaggagtcgtggtggtgcttgccctggcagcccttgtcctgggactggtgcgg gcccggaaccgcaaagctgaagcggcgcctggcccgatgtcccaggcggcacccctggcc agtggctcactgcagaagctgggccgagagccacccagcccgccgccctcagagcacctg tatcaccagactctccccagctatggtgggccaggagctggaggaccctacccccgcggt ggctccctggacccttcacactcaagcggccgaggctcagcagaggctgcagaagatgac gagatccgcatgatcaacgagttcccgcgcgtggccagtgtggcctcctccctggctgcc cgcggccctgactccggcatccagcaggatgcagacggactgagtgacacctcctgtgag ccgcctgcccccgacacctggtataagggccgtaaggcagggctgctgctgccgggtgca ggagccactctgtaccgagaagacggccccccagccactgccaccaccttcctggggggc tgtggcctaagccctgcgcccactggggactacggctttccagcagatggcaagccctgt gtggcgggagcactgacagccatcgtggccggtgaggaggagctccgtggcagctacaac tgggactacctgctgagctggtgccctcagttccagccgctggccagtgtcttcacagag atcgcccggctcaaggatgaagctcggccgtgtcccccggcgccccgtattgacccaccg cccctcatcactgccgtggcccacccaggagccaagtctgtgccccccaaaccagccagc acggccgcaacccgggccgtcttcccaccagcctctcaccgctcccccatcagccacgaa ggttccctgtcctcagcggccatgtctcccagcttctcaccttcactgtctcctctggcc gctcgctcacccgtcgtctcaccgtttggggtagcccagggcccctcagcctcagctctg agcgcagagtctggcctggagccaccggacgacaccgagctccatatctag

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